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Pay0022066 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022066
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationchr08:14869206..14869609
RNA-Seq ExpressionPay0022066
SyntenyPay0022066
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067842.1 PHD finger protein ALFIN-LIKE 3-like [Cucumis melo var. makuwa]5.5e-4698.97Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
        MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKE+ETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV

XP_004141692.1 PHD finger protein ALFIN-LIKE 3 [Cucumis sativus]3.3e-3584.54Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PTVFEVVT IAK+QVKEKSSTANGSKSKSSFKS EAEMQG  ARQSQAR+E+ET YEED+DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

XP_008462330.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo]2.7e-3279Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSS---EAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS+   EA+ QG  ARQSQAR+E+ET YEED+DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSS---EAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

XP_008462331.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo]1.1e-3381.44Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS EA+ QG  ARQSQAR+E+ET YEED+DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

XP_016903323.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo]5.5e-4698.97Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
        MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKE+ETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV

TrEMBL top hitse value%identityAlignment
A0A0A0K9L1 PHD-type domain-containing protein1.6e-3584.54Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PTVFEVVT IAK+QVKEKSSTANGSKSKSSFKS EAEMQG  ARQSQAR+E+ET YEED+DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

A0A1S3CGR0 PHD finger protein ALFIN-LIKE 3-like isoform X25.2e-3481.44Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS EA+ QG  ARQSQAR+E+ET YEED+DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

A0A1S4E514 PHD finger protein ALFIN-LIKE 3-like2.7e-4698.97Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
        MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKE+ETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV

A0A5A7VHJ0 PHD finger protein ALFIN-LIKE 3-like2.7e-4698.97Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
        MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKE+ETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV

A0A5D3BXQ0 PHD finger protein ALFIN-LIKE 3-like isoform X25.2e-3481.44Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS EA+ QG  ARQSQAR+E+ET YEED+DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIET-YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

SwissProt top hitse value%identityAlignment
O81488 PHD finger protein ALFIN-LIKE 43.3e-1749.5Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGS--KSKSSFK---SSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKF
        +PT+FEVV   AK+Q K+KSS +N S  +SKSS K    S A+      +  +  +E    EED+DE  +  C ACGE+YA+DEFWICCD+ E WFHGK 
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGS--KSKSSFK---SSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKF

Query:  V
        V
Subjt:  V

Q40359 PHD finger protein Alfin13.1e-1546.53Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKS--KSSFKSSEAEMQGTCARQS-QARKEIETYEEDK--DEHSDILCRACGENYASDEFWICCDIYEKWFHGKF
        +PTVFE+ T  AKQ   + ++  NGS S  KSS KS ++E Q    + S   ++E+++ EE++  D+     C ACG+NY +DEFWICCD+ EKWFHGK 
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKS--KSSFKSSEAEMQGTCARQS-QARKEIETYEEDK--DEHSDILCRACGENYASDEFWICCDIYEKWFHGKF

Query:  V
        V
Subjt:  V

Q5XEM9 PHD finger protein ALFIN-LIKE 56.6e-1850.48Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTA--NGSKSKSSFKSSEAEMQGT---CARQSQARKEIETYE----EDKDEHSDILCRACGENYASDEFWICCDIYEKWF
        +PTV+EVVT  A++Q KE  S+A  NG++SKS+ K    E + +    A+  +   E+E  E    ED+DEH + LC ACG+NYASDEFWICCD+ EKWF
Subjt:  MPTVFEVVTNIAKQQVKEKSSTA--NGSKSKSSFKSSEAEMQGT---CARQSQARKEIETYE----EDKDEHSDILCRACGENYASDEFWICCDIYEKWF

Query:  HGKFV
        HG+ V
Subjt:  HGKFV

Q8LA16 PHD finger protein ALFIN-LIKE 79.5e-1751.02Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSS-FKSSEAEMQGTCARQS-QARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PT+FEVVT  AKQ  K++S+  N S+SKSS  K   +E     ++ S   RKE E+ +ED+D+    +C ACG+NY  DEFWICCD  EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSS-FKSSEAEMQGTCARQS-QARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

Q9M2B4 PHD finger protein ALFIN-LIKE 38.6e-1847.92Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PT+FEVVT +AK + K  ++  NG+KSKS+ K   +E + +  +Q +   E E  E+D+D+H + LC ACG++  +DEFWICCD+ EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

Arabidopsis top hitse value%identityAlignment
AT1G14510.1 alfin-like 76.8e-1851.02Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSS-FKSSEAEMQGTCARQS-QARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PT+FEVVT  AKQ  K++S+  N S+SKSS  K   +E     ++ S   RKE E+ +ED+D+    +C ACG+NY  DEFWICCD  EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSS-FKSSEAEMQGTCARQS-QARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

AT2G02470.1 alfin-like 63.7e-1646.6Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSK-SSFKSSEAEMQGTCARQS------QARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHG
        +PT+FEVV+  AKQ  K+ S   N SKSK S  KS ++E     A+ S      +  +E E+ +E +D+    +C ACG+NY +DEFWICCD  EKWFHG
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSK-SSFKSSEAEMQGTCARQS------QARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHG

Query:  KFV
        K V
Subjt:  KFV

AT3G42790.1 alfin-like 36.1e-1947.92Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV
        +PT+FEVVT +AK + K  ++  NG+KSKS+ K   +E + +  +Q +   E E  E+D+D+H + LC ACG++  +DEFWICCD+ EKWFHGK V
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV

AT5G20510.1 alfin-like 54.7e-1950.48Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTA--NGSKSKSSFKSSEAEMQGT---CARQSQARKEIETYE----EDKDEHSDILCRACGENYASDEFWICCDIYEKWF
        +PTV+EVVT  A++Q KE  S+A  NG++SKS+ K    E + +    A+  +   E+E  E    ED+DEH + LC ACG+NYASDEFWICCD+ EKWF
Subjt:  MPTVFEVVTNIAKQQVKEKSSTA--NGSKSKSSFKSSEAEMQGT---CARQSQARKEIETYE----EDKDEHSDILCRACGENYASDEFWICCDIYEKWF

Query:  HGKFV
        HG+ V
Subjt:  HGKFV

AT5G26210.1 alfin-like 42.3e-1849.5Show/hide
Query:  MPTVFEVVTNIAKQQVKEKSSTANGS--KSKSSFK---SSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKF
        +PT+FEVV   AK+Q K+KSS +N S  +SKSS K    S A+      +  +  +E    EED+DE  +  C ACGE+YA+DEFWICCD+ E WFHGK 
Subjt:  MPTVFEVVTNIAKQQVKEKSSTANGS--KSKSSFK---SSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKF

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGCAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAGTGAAGC
TGAAATGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGAAAGAGATAGAGACGTATGAAGAAGATAAAGACGAGCACAGTGACATCTTATGTAGGGCATGCGGTGAGA
ACTATGCTTCAGATGAATTTTGGATTTGTTGTGATATCTATGAGAAATGGTTCCATGGGAAATTTGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGCAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAGTGAAGC
TGAAATGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGAAAGAGATAGAGACGTATGAAGAAGATAAAGACGAGCACAGTGACATCTTATGTAGGGCATGCGGTGAGA
ACTATGCTTCAGATGAATTTTGGATTTGTTGTGATATCTATGAGAAATGGTTCCATGGGAAATTTGTTGTATGA
Protein sequenceShow/hide protein sequence
MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEIETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV