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Pay0022122 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022122
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:26880484..26882401
RNA-Seq ExpressionPay0022122
SyntenyPay0022122
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037988.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.7e-1566.13Show/hide
Query:  LQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        + G    +++ F SPVLLVKKKDGSWCF +DYR + N TVPDKF IPV+EELFDELNEA +F
Subjt:  LQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
KAA0060678.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]7.7e-1580.39Show/hide
Query:  FRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        F SPVLLVKKKDGSW FY+DYRA+ NAT+PDKFPIPV EELFDELN A +F
Subjt:  FRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
KAA0060684.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.9e-2795.38Show/hide
Query:  EARNEKASWQNVDLQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
        EARNEKASWQNVDLQGYKTMQQLVFRSPVLLVKKKDGSW FY+DYRALKNATVPDKFPIPV+EEL
Subjt:  EARNEKASWQNVDLQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
TYK03311.1 hypothetical protein E5676_scaffold298G001570 [Cucumis melo var. makuwa]1.6e-1593.48Show/hide
Query:  MQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
        MQQLVFRSPVLLVKKKDGSW FY+DYRALKNATVPDKFPIPV+EEL
Subjt:  MQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
XP_016901226.1 PREDICTED: uncharacterized protein LOC107991204 [Cucumis melo]3.4e-79100Show/hide
Query:  MASVKENDPSTNWETSLERVEKKFNIEDHNNDQNKFKKIEMLVFNGEDLDSWIKRSRDHEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLVFR
        MASVKENDPSTNWETSLERVEKKFNIEDHNNDQNKFKKIEMLVFNGEDLDSWIKRSRDHEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLVFR
Subjt:  MASVKENDPSTNWETSLERVEKKFNIEDHNNDQNKFKKIEMLVFNGEDLDSWIKRSRDHEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLVFR

Query:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
Subjt:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
TrEMBL top hitse value%identityAlignment
A0A1S4DZ10 uncharacterized protein LOC1079912041.6e-79100Show/hide
Query:  MASVKENDPSTNWETSLERVEKKFNIEDHNNDQNKFKKIEMLVFNGEDLDSWIKRSRDHEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLVFR
        MASVKENDPSTNWETSLERVEKKFNIEDHNNDQNKFKKIEMLVFNGEDLDSWIKRSRDHEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLVFR
Subjt:  MASVKENDPSTNWETSLERVEKKFNIEDHNNDQNKFKKIEMLVFNGEDLDSWIKRSRDHEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLVFR

Query:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
Subjt:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
A0A5A7T574 Ty3/gypsy retrotransposon protein3.7e-1566.13Show/hide
Query:  LQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        + G    +++ F SPVLLVKKKDGSWCF +DYR + N TVPDKF IPV+EELFDELNEA +F
Subjt:  LQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
A0A5A7UZJ7 Putative retroelement pol polyprotein3.7e-1580.39Show/hide
Query:  FRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        F SPVLLVKKKDGSW FY+DYRA+ NAT+PDKFPIPV EELFDELN A +F
Subjt:  FRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
A0A5A7V051 Ty3-gypsy retrotransposon protein1.9e-2795.38Show/hide
Query:  EARNEKASWQNVDLQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
        EARNEKASWQNVDLQGYKTMQQLVFRSPVLLVKKKDGSW FY+DYRALKNATVPDKFPIPV+EEL
Subjt:  EARNEKASWQNVDLQGYKTMQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
A0A5D3BUA5 RT_RNaseH_2 domain-containing protein7.5e-1693.48Show/hide
Query:  MQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
        MQQLVFRSPVLLVKKKDGSW FY+DYRALKNATVPDKFPIPV+EEL
Subjt:  MQQLVFRSPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEEL
SwissProt top hitse value%identityAlignment
P10394 Retrovirus-related Pol polyprotein from transposon 4122.9e-0425Show/hide
Query:  HEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLV-------FRSPVLLVKKKDG------SWCFYMDYRALKNATVPDKFPIPVIEELFDELNE
        ++++ +L+++E       R+  +  + +  Q  K ++  +       + SP+LLV KK         W   +DYR +    + DKFP+P I+++ D+L  
Subjt:  HEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLV-------FRSPVLLVKKKDG------SWCFYMDYRALKNATVPDKFPIPVIEELFDELNE

Query:  AFIF
        A  F
Subjt:  AFIF
Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.3e-0648.98Show/hide
Query:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        SPV+LV KKDG++   +DYR L  AT+ D FP+P I+ L   +  A IF
Subjt:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
Q99315 Transposon Ty3-G Gag-Pol polyprotein2.3e-0648.98Show/hide
Query:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
        SPV+LV KKDG++   +DYR L  AT+ D FP+P I+ L   +  A IF
Subjt:  SPVLLVKKKDGSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTGTGAAGGAGAATGATCCATCTACTAATTGGGAAACCAGTTTGGAAAGAGTCGAAAAAAAGTTCAATATAGAGGATCACAACAACGATCAAAACAAGTTTAA
AAAGATTGAGATGCTGGTCTTCAATGGCGAGGATCTTGATTCATGGATTAAACGATCTAGGGACCATGAAGAGAGGAAAAAATTACAGAATGAAGAGATATGCTTACCAT
CAGAAGCAAGAAATGAAAAGGCTAGTTGGCAAAATGTTGATCTCCAGGGTTATAAGACCATGCAACAGCTTGTATTCAGAAGCCCAGTCCTCTTAGTGAAAAAGAAAGAT
GGTAGCTGGTGTTTCTACATGGATTATAGGGCATTGAAGAATGCTACTGTCCCAGATAAATTTCCAATCCCAGTTATAGAAGAACTGTTTGATGAATTGAATGAAGCATT
CATATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTGTGAAGGAGAATGATCCATCTACTAATTGGGAAACCAGTTTGGAAAGAGTCGAAAAAAAGTTCAATATAGAGGATCACAACAACGATCAAAACAAGTTTAA
AAAGATTGAGATGCTGGTCTTCAATGGCGAGGATCTTGATTCATGGATTAAACGATCTAGGGACCATGAAGAGAGGAAAAAATTACAGAATGAAGAGATATGCTTACCAT
CAGAAGCAAGAAATGAAAAGGCTAGTTGGCAAAATGTTGATCTCCAGGGTTATAAGACCATGCAACAGCTTGTATTCAGAAGCCCAGTCCTCTTAGTGAAAAAGAAAGAT
GGTAGCTGGTGTTTCTACATGGATTATAGGGCATTGAAGAATGCTACTGTCCCAGATAAATTTCCAATCCCAGTTATAGAAGAACTGTTTGATGAATTGAATGAAGCATT
CATATTCTAA
Protein sequenceShow/hide protein sequence
MASVKENDPSTNWETSLERVEKKFNIEDHNNDQNKFKKIEMLVFNGEDLDSWIKRSRDHEERKKLQNEEICLPSEARNEKASWQNVDLQGYKTMQQLVFRSPVLLVKKKD
GSWCFYMDYRALKNATVPDKFPIPVIEELFDELNEAFIF