; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0022154 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022154
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRNA exonuclease 4
Genome locationchr07:6545877..6549371
RNA-Seq ExpressionPay0022154
SyntenyPay0022154
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649831.1 hypothetical protein Csa_012901 [Cucumis sativus]2.3e-13496.18Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGG
        LAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGG
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGG

XP_004146040.1 RNA exonuclease 4 [Cucumis sativus]2.4e-13696.23Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

XP_008463709.1 PREDICTED: RNA exonuclease 4 [Cucumis melo]4.5e-143100Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

XP_038897121.1 RNA exonuclease 4 isoform X2 [Benincasa hispida]9.8e-13091.54Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQ-------KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQG
        M SQLKK  KPKLLNPNWA+LQQ       KLKP GSNHS++STVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTD VAMDCEMVGVGQG
Subjt:  MTSQLKKNPKPKLLNPNWAILQQ-------KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQG

Query:  NKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEG
        NKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRP DLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLLSHPK DVRDTSEYQFFQKEG
Subjt:  NKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEG

Query:  CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        C+RALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E KLKLKQKKRK RKKSKDGGGFE
Subjt:  CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

XP_038897122.1 RNA exonuclease 4 isoform X3 [Benincasa hispida]8.0e-13293.96Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKK  KPKLLNPNWA+LQQKLKP GSNHS++STVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTD VAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRP DLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLLSHPK DVRDTSEYQFFQKEGC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E KLKLKQKKRK RKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

TrEMBL top hitse value%identityAlignment
A0A0A0KZK3 RNA exonuclease 41.2e-13696.23Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

A0A1S3CJW0 RNA exonuclease 42.2e-143100Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

A0A5A7VEJ2 RNA exonuclease 41.1e-129100Show/hide
Query:  KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVV
        KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVV
Subjt:  KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVV

Query:  DFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARS
        DFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARS
Subjt:  DFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARS

Query:  AMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        AMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  AMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

A0A6J1FBB2 RNA exonuclease 47.9e-12588.68Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        M SQLKK+ KPKLLNPNWA+LQQKL PHGS  S  S+VPKSEASSKTLLGKRK+RSD ES+HS K +LIPVNDDFSLTD VAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VT+VNKWGNVIYDEFVRPIERVVDFRT+ISGIRPCDL+KAKDFPTVQKRVAELIKG+ILVGHALRNDLKALLLSHPK DVRDTSEYQFFQ+ GC+RALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAE LGV+IQNGEHCPVEDARSAMLLYQKK KEWEKSVKAE KLKLKQKKRKPRKKSKDGGG E
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

E5GBF8 RNA exonuclease 42.2e-143100Show/hide
Query:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
        MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR
Subjt:  MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGR

Query:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
        VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH
Subjt:  VTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRH

Query:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
        LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE
Subjt:  LAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 42.0e-4052.17Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKND
        +AMDCE VGVG +G +SAL R+++VN +G+V+ DEFV+P E+VV++RT +SGI+P  +K A  F   QK+ A++++G+ILVGHAL++DL+AL+LSHPK+ 
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKND

Query:  VRDTSEYQFFQK---EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEK
        +RDTS +  F+K   +G   +L+ L  E L + IQ GEH  VEDAR+ MLLY+K++ E+EK
Subjt:  VRDTSEYQFFQK---EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEK

Q6DEW6 RNA exonuclease 41.4e-4148.63Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH
        LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++VRP ERV D+RT +SGIRP D+K  + F  VQ  VAE+++G+ LVGHA+ NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRK
        PK  +RDT +Y+ F++  +  + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+       K + P+K
Subjt:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRK

Q6PAQ4 RNA exonuclease 43.6e-4248.48Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH
        LT  +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP +LK+ ++F  V+K VAE++KG+ILVGHAL NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKS
        PK  +RDT +++ F+   +  + +L+ L+ + LG+++Q  EHC ++DA++AM LY   ++EWE S
Subjt:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKS

Q91560 RNA exonuclease 42.1e-4248.11Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH
        LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++V+P ERV D+RT +SGIRP D+KK + F  VQK V+E+++G+ LVGHA+ NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQK--LKLKQKKRKPRK
        PK  +RDT +Y+ F++  +  + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+    + + +K + P+K
Subjt:  PKNDVRDTSEYQFFQK--EGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQK--LKLKQKKRKPRK

Q9GZR2 RNA exonuclease 41.6e-4249.42Show/hide
Query:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH
        LT  +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP +LK+ ++   VQK VAE++KG+ILVGHAL NDLK L L H
Subjt:  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSH

Query:  PKNDVRDTSEYQFF--QKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKL
        PK  +RDT +Y+ F  Q +  + +LR L+ + LG+Q+Q  EHC ++DA++AM LY   +KEWE   +  + L
Subjt:  PKNDVRDTSEYQFF--QKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKL

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein8.9e-2037.57Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKG--------KILVGHALRNDLKAL
        +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK       V++RV   + G         +LVGH LR+D+  L
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKG--------KILVGHALRNDLKAL

Query:  LLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE
         L +P + +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Subjt:  LLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE

AT2G48100.2 Exonuclease family protein8.9e-2037.57Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKG--------KILVGHALRNDLKAL
        +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK       V++RV   + G         +LVGH LR+D+  L
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKG--------KILVGHALRNDLKAL

Query:  LLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE
         L +P + +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Subjt:  LLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE

AT2G48100.3 Exonuclease family protein8.9e-2037.57Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKG--------KILVGHALRNDLKAL
        +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK       V++RV   + G         +LVGH LR+D+  L
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKG--------KILVGHALRNDLKAL

Query:  LLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE
         L +P + +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Subjt:  LLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE

AT3G15080.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.8e-9366.29Show/hide
Query:  MTSQLKKNPKPKL------LNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGN
        M+S LK+ PK K+      LNPNW++LQQKLK     +++ S+ P++ +S   +LGKRKER D E +  + N L PVNDD SLTDEVAMDCEMVGV QG 
Subjt:  MTSQLKKNPKPKL------LNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGN

Query:  KSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGC
        KSALGRVTLVNKWGNV+YDEFVRP+E VVDFRT ISGIRP DL+KAKDF   Q +VAELIKGKILVGHAL NDLKALLL+HPK D+RDT EYQ F K   
Subjt:  KSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGC

Query:  KRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDG
        +++L+HLA+E LG  IQNGEHCP++DAR+AM+LYQK RKEWEK+VK + ++ LKQKKRKP+KK+K G
Subjt:  KRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDG

AT3G27970.1 Exonuclease family protein7.5e-1932.37Show/hide
Query:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELI--------------KGKILVGHALR
        VA+ C+MVG G  G+     RV + ++  NVI+  +V+P   V  +R + +GIRP +L+ A     VQ+++ E +              K +ILVGH L 
Subjt:  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELI--------------KGKILVGHALR

Query:  NDLKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEK
        +DL  L L +P + +RDT++Y    K      +L++L   +LG  +  G   P ED  + M LY + R +  K
Subjt:  NDLKALLLSHPKNDVRDTSEYQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCAATACTCCAACAAAAGCTGAAACCCCATGGTTCAAATCATTCAAAGGCCTCTAC
TGTCCCGAAATCCGAAGCTTCATCAAAGACCCTTTTAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATCCTCATTCCGGTGAATGATG
ACTTTAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGAGTAGGTCAAGGTAACAAAAGTGCCCTTGGACGTGTTACACTGGTAAACAAATGGGGGAATGTT
ATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGCTAAGGATTTTCCAACTGTCCA
GAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAATGACGTGAGAGACACCT
CCGAGTACCAATTCTTTCAGAAGGAAGGATGTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTCAGATCCAAAATGGGGAGCACTGTCCTGTAGAAGAT
GCTCGTTCTGCCATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACAAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAA
ATCCAAGGATGGAGGAGGTTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
GCCCTCCTCTCCTTCCTTTCACTGTTTCCCGGTTTAGGGCCACCGGGAGAGAAGACGACCGAAGCGGCGGCTACTATTAACATGTAAATTGTGGGAGTCGGACGTTAAAG
TGGGAGCTTCAACATTATGACATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCAATACTCCAACAAAAGCTGAAACCCCATGGTTCAAATC
ATTCAAAGGCCTCTACTGTCCCGAAATCCGAAGCTTCATCAAAGACCCTTTTAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATCCTC
ATTCCGGTGAATGATGACTTTAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGAGTAGGTCAAGGTAACAAAAGTGCCCTTGGACGTGTTACACTGGTAAA
CAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGCTAAGG
ATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAAT
GACGTGAGAGACACCTCCGAGTACCAATTCTTTCAGAAGGAAGGATGTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTCAGATCCAAAATGGGGAGCA
CTGTCCTGTAGAAGATGCTCGTTCTGCCATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACAAAAGCTTAAATTGAAGCAGAAAAAAC
GCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGATCAATCAGACTCCTAATAGCTTAATCCGACTTTAATCTTACAAAAATGTGTAACATGTTAGTATAG
AACTTAGAATGAGTATTTATTACGGAGATTTGAAACCATGAGTTCCATTCTTTATTATGAGTGAAACTATTGGCCTGTGATATTGGCCAAATTTTGATCTTCGGCCTCGA
AAAGAATTATTGGATATTGATGTTGAAGTGAATAATATTGTGCTAATGTTGTGATTTTAAGTTTAAAAGTGAATAATATAGTTAGGTATATAATAATGTAAAAGTAAA
Protein sequenceShow/hide protein sequence
MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNV
IYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVED
ARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE