; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0022250 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022250
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr07:6161317..6162053
RNA-Seq ExpressionPay0022250
SyntenyPay0022250
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053607.1 uncharacterized protein E6C27_scaffold190G001830 [Cucumis melo var. makuwa]2.5e-10883.53Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        M+LIHKA LEKTISNV SFYPQLIREFIVNLPD+FNDPS           FKFVISP+VINGFLGNTVDIDCSPSC TTEVLA VLSRGTL TWPVNGIP
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT
        AA L+VKY ILHKIGIANWF SSHASSI AALGTF    A  +LFSSLLLHLNGAVLTA+DAP+PEPKTIALSYRLFQGSHVPDIDHDVHPTR PRIFDT
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT

Query:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        TDWD+SAEGFYVDRELA RI+NSLTAESRALT SITLL+E RLEVDAL+
Subjt:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

TYK25712.1 uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa]2.9e-10172.66Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        MD IHKA L+KTISNVG FYPQLI+EFIVNLPDEFNDPS           FKFV+S AVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTL TWPVNGI 
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA
        AAAL+VKY ILHKIGIANWFPSSHASSI AAL TF                                 A  +LFSSLLLHLNGA+LTA+DAP PEPKTIA
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA

Query:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        LSYRLFQGSHVPDIDH VHPTRGPRIFDTTDWD+S EGFYVD ELA RI+N LTAES ALT SITLL+E +LEVDAL+
Subjt:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

XP_008460447.1 PREDICTED: uncharacterized protein LOC103499259 [Cucumis melo]2.5e-10883.53Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        M+LIHKA LEKTISNV SFYPQLIREFIVNLPD+FNDPS           FKFVISP+VINGFLGNTVDIDCSPSC TTEVLA VLSRGTL TWPVNGIP
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT
        AA L+VKY ILHKIGIANWF SSHASSI AALGTF    A  +LFSSLLLHLNGAVLTA+DAP+PEPKTIALSYRLFQGSHVPDIDHDVHPTR PRIFDT
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT

Query:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        TDWD+SAEGFYVDRELA RI+NSLTAESRALT SITLL+E RLEVDAL+
Subjt:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

XP_008462856.1 PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo]1.2e-10274.46Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        M+L HKA LEKTISNVG FYPQLIREFIVNLPD+FNDPS           FKFVISPAVIN FLGNTVDID S SCPTTEVLA VLS GTLSTWPVNGIP
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA
         AALSVKY ILHKIGIANWFPSSHASSI AAL TF                                 A  +LFSSLLLHLNG VLTA+DAP PEPKTIA
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA

Query:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        LSYRLFQGSHVPDIDHDVHPT GPRIFDTTDWDESAEGFYVDRELA RI+NSLTAESRALT SITLL+E RLEVDAL+
Subjt:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

XP_008465605.1 PREDICTED: uncharacterized protein LOC103503245 [Cucumis melo]2.9e-10172.66Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        MD IHKA L+KTISNVG FYPQLI+EFIVNLPDEFNDPS           FKFV+S AVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTL TWPVNGI 
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA
        AAAL+VKY ILHKIGIANWFPSSHASSI AAL TF                                 A  +LFSSLLLHLNGA+LTA+DAP PEPKTIA
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA

Query:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        LSYRLFQGSHVPDIDH VHPTRGPRIFDTTDWD+S EGFYVD ELA RI+N LTAES ALT SITLL+E +LEVDAL+
Subjt:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

TrEMBL top hitse value%identityAlignment
A0A1S3CC22 uncharacterized protein LOC1034992591.2e-10883.53Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        M+LIHKA LEKTISNV SFYPQLIREFIVNLPD+FNDPS           FKFVISP+VINGFLGNTVDIDCSPSC TTEVLA VLSRGTL TWPVNGIP
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT
        AA L+VKY ILHKIGIANWF SSHASSI AALGTF    A  +LFSSLLLHLNGAVLTA+DAP+PEPKTIALSYRLFQGSHVPDIDHDVHPTR PRIFDT
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT

Query:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        TDWD+SAEGFYVDRELA RI+NSLTAESRALT SITLL+E RLEVDAL+
Subjt:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

A0A1S3CHW3 uncharacterized protein LOC1035011375.7e-10374.46Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        M+L HKA LEKTISNVG FYPQLIREFIVNLPD+FNDPS           FKFVISPAVIN FLGNTVDID S SCPTTEVLA VLS GTLSTWPVNGIP
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA
         AALSVKY ILHKIGIANWFPSSHASSI AAL TF                                 A  +LFSSLLLHLNG VLTA+DAP PEPKTIA
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA

Query:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        LSYRLFQGSHVPDIDHDVHPT GPRIFDTTDWDESAEGFYVDRELA RI+NSLTAESRALT SITLL+E RLEVDAL+
Subjt:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

A0A1S3CPM5 uncharacterized protein LOC1035032451.4e-10172.66Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        MD IHKA L+KTISNVG FYPQLI+EFIVNLPDEFNDPS           FKFV+S AVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTL TWPVNGI 
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA
        AAAL+VKY ILHKIGIANWFPSSHASSI AAL TF                                 A  +LFSSLLLHLNGA+LTA+DAP PEPKTIA
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA

Query:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        LSYRLFQGSHVPDIDH VHPTRGPRIFDTTDWD+S EGFYVD ELA RI+N LTAES ALT SITLL+E +LEVDAL+
Subjt:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

A0A5A7UGJ3 Uncharacterized protein1.2e-10883.53Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        M+LIHKA LEKTISNV SFYPQLIREFIVNLPD+FNDPS           FKFVISP+VINGFLGNTVDIDCSPSC TTEVLA VLSRGTL TWPVNGIP
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT
        AA L+VKY ILHKIGIANWF SSHASSI AALGTF    A  +LFSSLLLHLNGAVLTA+DAP+PEPKTIALSYRLFQGSHVPDIDHDVHPTR PRIFDT
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF----ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDT

Query:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        TDWD+SAEGFYVDRELA RI+NSLTAESRALT SITLL+E RLEVDAL+
Subjt:  TDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

A0A5D3DQA5 Uncharacterized protein1.4e-10172.66Show/hide
Query:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP
        MD IHKA L+KTISNVG FYPQLI+EFIVNLPDEFNDPS           FKFV+S AVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTL TWPVNGI 
Subjt:  MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSR----------FKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIP

Query:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA
        AAAL+VKY ILHKIGIANWFPSSHASSI AAL TF                                 A  +LFSSLLLHLNGA+LTA+DAP PEPKTIA
Subjt:  AAALSVKYVILHKIGIANWFPSSHASSIFAALGTF---------------------------------ALLQLFSSLLLHLNGAVLTATDAPEPEPKTIA

Query:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL
        LSYRLFQGSHVPDIDH VHPTRGPRIFDTTDWD+S EGFYVD ELA RI+N LTAES ALT SITLL+E +LEVDAL+
Subjt:  LSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTSITLLTEHRLEVDALL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCTTATCCATAAGGCTAGTTTGGAAAAAACTATCTCGAATGTTGGTTCTTTTTATCCCCAGTTGATTAGAGAATTTATCGTCAATCTGCCTGATGAGTTTAATGA
TCCGAGTAGGTTCAAATTTGTGATTTCACCTGCTGTGATAAATGGTTTTCTTGGAAATACTGTTGATATTGATTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTA
CTGTCTTATCTAGAGGGACCTTGTCCACATGGCCTGTGAATGGAATTCCTGCGGCTGCTCTCAGTGTCAAGTATGTTATTCTGCACAAGATTGGTATTGCCAATTGGTTC
CCTTCCTCACATGCCTCAAGCATATTTGCTGCCTTAGGTACATTTGCTCTTCTGCAGTTGTTCTCCAGTCTGCTACTTCACCTAAATGGAGCGGTGCTTACTGCAACTGA
TGCTCCTGAACCTGAACCTAAGACAATTGCTCTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGCATCCGACTCGAGGCCCACGTATTT
TTGATACTACTGACTGGGATGAGTCTGCTGAAGGCTTTTATGTGGATCGGGAGTTGGCTGCCCGCATTGTAAATTCCTTGACTGCTGAATCTCGTGCACTGACTACCTCC
ATCACTTTGTTAACTGAACATCGATTAGAAGTTGATGCTCTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCTTATCCATAAGGCTAGTTTGGAAAAAACTATCTCGAATGTTGGTTCTTTTTATCCCCAGTTGATTAGAGAATTTATCGTCAATCTGCCTGATGAGTTTAATGA
TCCGAGTAGGTTCAAATTTGTGATTTCACCTGCTGTGATAAATGGTTTTCTTGGAAATACTGTTGATATTGATTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTA
CTGTCTTATCTAGAGGGACCTTGTCCACATGGCCTGTGAATGGAATTCCTGCGGCTGCTCTCAGTGTCAAGTATGTTATTCTGCACAAGATTGGTATTGCCAATTGGTTC
CCTTCCTCACATGCCTCAAGCATATTTGCTGCCTTAGGTACATTTGCTCTTCTGCAGTTGTTCTCCAGTCTGCTACTTCACCTAAATGGAGCGGTGCTTACTGCAACTGA
TGCTCCTGAACCTGAACCTAAGACAATTGCTCTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGCATCCGACTCGAGGCCCACGTATTT
TTGATACTACTGACTGGGATGAGTCTGCTGAAGGCTTTTATGTGGATCGGGAGTTGGCTGCCCGCATTGTAAATTCCTTGACTGCTGAATCTCGTGCACTGACTACCTCC
ATCACTTTGTTAACTGAACATCGATTAGAAGTTGATGCTCTTCTTTGA
Protein sequenceShow/hide protein sequence
MDLIHKASLEKTISNVGSFYPQLIREFIVNLPDEFNDPSRFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLATVLSRGTLSTWPVNGIPAAALSVKYVILHKIGIANWF
PSSHASSIFAALGTFALLQLFSSLLLHLNGAVLTATDAPEPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFDTTDWDESAEGFYVDRELAARIVNSLTAESRALTTS
ITLLTEHRLEVDALL