; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0022430 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022430
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon gag protein
Genome locationchr06:15917750..15920485
RNA-Seq ExpressionPay0022430
SyntenyPay0022430
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061315.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-8770.19Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+ NDKCP+VIEDVNIVRRYDPH                                          ALATNTLSFQQ+MKQQMTQLTT 
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
         SKMDGKGKL AQP H NVS ISLRS             VTSK LPLNSKN+SKEEKVETN S SNSKNDKSPLNDFTPYIPKPPFPSRL PK+KETPK+
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP
        EELL+MF+KVQINLPLLDAIQQVP YAKFLKELCTNKRKTKER MV+QNVSALLKSNIPEKCNDP
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP

TYK14267.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-8770.19Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+ NDKCP+VIEDVNIVRRYDPH                                          ALATNTLSFQQ+MKQQMTQLTT 
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
         SKMDGKGKL AQP H NVS ISLRS             VTSK LPLNSKN+SKEEKVETN S SNSKNDKSPLNDFTPYIPKPPFPSRL PK+KETPK+
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP
        EELL+MF+KVQINLPLLDAIQQVP YAKFLKELCTNKRKTKER MV+QNVSALLKSNIPEKCNDP
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP

XP_008465471.1 PREDICTED: uncharacterized protein LOC103503078, partial [Cucumis melo]2.2e-8967.01Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+ NDKCP+VIEDVNIVRRYDPH                                          ALATNTLSFQQ+MKQQMTQLTT 
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
         SKMDGKGKL AQP H NVS ISLRS             VTSK LPLNSKN+SKEEKVETN S SNSKNDKSPLNDFTPYIPKPPFPSRL PK+KETPK+
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIR--NRLISHAMLDL
        EELL+MF+KVQINLPLLDAIQQVP YAKFLKELCTNKRKTKER MV+QNVSALLKSNIPEKCNDP  FS P V     R +   +L+L
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIR--NRLISHAMLDL

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]5.4e-8876.73Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH                                          ALATNTLSFQQKMKQQMTQLTTV
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
        ISKMDGKGKLPAQPDHVNVSAISLRS             VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAM
        EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAM
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAM

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]4.0e-10772.46Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+PNDKCP+VIEDVNIV++YDPH                                          ALATNTLSFQQ+MKQQMTQLTTV
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
        ISKMDGKGKL AQPDH NVS ISLRS             VTSK LPLNSKN+SKEEK ETN S SNSKNDKSPLNDFTPYIPKPPFPSRLA KKKETP++
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIRNRLISHAMLDLGASINVMPYNVFKD
        EELL+MF+KVQINL LLDAIQQVPRYAKF KELCTNKRKTKERAMVSQNVSALLKSN P+KCN P MFSLPCVI NRLISHAMLDLG SINVMP+NVFKD
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIRNRLISHAMLDLGASINVMPYNVFKD

Query:  LELNN
        LELNN
Subjt:  LELNN

TrEMBL top hitse value%identityAlignment
A0A1S3CQF6 uncharacterized protein LOC1035030781.1e-8967.01Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+ NDKCP+VIEDVNIVRRYDPH                                          ALATNTLSFQQ+MKQQMTQLTT 
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
         SKMDGKGKL AQP H NVS ISLRS             VTSK LPLNSKN+SKEEKVETN S SNSKNDKSPLNDFTPYIPKPPFPSRL PK+KETPK+
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIR--NRLISHAMLDL
        EELL+MF+KVQINLPLLDAIQQVP YAKFLKELCTNKRKTKER MV+QNVSALLKSNIPEKCNDP  FS P V     R +   +L+L
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIR--NRLISHAMLDL

A0A1S3CQU8 uncharacterized protein LOC1035032912.6e-8876.73Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH                                          ALATNTLSFQQKMKQQMTQLTTV
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
        ISKMDGKGKLPAQPDHVNVSAISLRS             VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAM
        EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAM
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAM

A0A1S4E3R2 uncharacterized protein LOC1079919101.9e-10772.46Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+PNDKCP+VIEDVNIV++YDPH                                          ALATNTLSFQQ+MKQQMTQLTTV
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
        ISKMDGKGKL AQPDH NVS ISLRS             VTSK LPLNSKN+SKEEK ETN S SNSKNDKSPLNDFTPYIPKPPFPSRLA KKKETP++
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIRNRLISHAMLDLGASINVMPYNVFKD
        EELL+MF+KVQINL LLDAIQQVPRYAKF KELCTNKRKTKERAMVSQNVSALLKSN P+KCN P MFSLPCVI NRLISHAMLDLG SINVMP+NVFKD
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDPDMFSLPCVIRNRLISHAMLDLGASINVMPYNVFKD

Query:  LELNN
        LELNN
Subjt:  LELNN

A0A5A7V668 Retrotransposon gag protein1.0e-8770.19Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+ NDKCP+VIEDVNIVRRYDPH                                          ALATNTLSFQQ+MKQQMTQLTT 
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
         SKMDGKGKL AQP H NVS ISLRS             VTSK LPLNSKN+SKEEKVETN S SNSKNDKSPLNDFTPYIPKPPFPSRL PK+KETPK+
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP
        EELL+MF+KVQINLPLLDAIQQVP YAKFLKELCTNKRKTKER MV+QNVSALLKSNIPEKCNDP
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP

A0A5D3CQR9 Retrotransposon gag protein1.0e-8770.19Show/hide
Query:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV
        L +TKCGVCGLVG+ NDKCP+VIEDVNIVRRYDPH                                          ALATNTLSFQQ+MKQQMTQLTT 
Subjt:  LSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPH------------------------------------------ALATNTLSFQQKMKQQMTQLTTV

Query:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK
         SKMDGKGKL AQP H NVS ISLRS             VTSK LPLNSKN+SKEEKVETN S SNSKNDKSPLNDFTPYIPKPPFPSRL PK+KETPK+
Subjt:  ISKMDGKGKLPAQPDHVNVSAISLRS-------------VTSKLLPLNSKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKK

Query:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP
        EELL+MF+KVQINLPLLDAIQQVP YAKFLKELCTNKRKTKER MV+QNVSALLKSNIPEKCNDP
Subjt:  EELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSALLKSNIPEKCNDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGAACCCAAATTCTGTGGAACTCATCATCTTTCTTTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGTTATCCAAATGACAAATGTCCCAAGGTGATC
GAGGATGTAAACATTGTTCGAAGATATGACCCTCACGCTTTGGCAACTAACACTCTTTCTTTTCAACAAAAGATGAAACAACAAATGACTCAACTTACTACCGTC
ATAAGCAAGATGGATGGGAAAGGCAAACTTCCCGCTCAACCGGACCATGTTAATGTAAGTGCCATTTCACTAAGAAGTGTAACTTCCAAACTCTTACCTCTTAAT
AGTAAGAATCAGTCCAAGGAAGAAAAGGTTGAAACAAACTCCTCATCATCTAATTCTAAAAATGATAAATCTCCTCTTAATGATTTTACTCCTTACATACCTAAG
CCTCCTTTTCCCTCTAGGTTGGCTCCAAAAAAGAAGGAAACACCCAAAAAGGAAGAACTCTTGAAGATGTTTAAAAAGGTGCAAATCAACTTGCCCCTTCTCGAT
GCAATCCAACAAGTCCCGAGGTATGCAAAGTTTCTAAAGGAGTTGTGTACCAACAAGAGGAAAACAAAAGAAAGAGCAATGGTAAGTCAAAATGTTTCAGCTCTT
CTAAAGAGTAATATTCCGGAAAAATGCAATGACCCCGATATGTTTTCTCTACCTTGTGTAATAAGAAATAGACTAATTTCTCATGCAATGCTTGACTTAGGAGCA
TCCATAAATGTCATGCCATACAACGTCTTTAAAGATCTAGAACTCAATAATTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGAACCCAAATTCTGTGGAACTCATCATCTTTCTTTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGTTATCCAAATGACAAATGTCCCAAGGTGATC
GAGGATGTAAACATTGTTCGAAGATATGACCCTCACGCTTTGGCAACTAACACTCTTTCTTTTCAACAAAAGATGAAACAACAAATGACTCAACTTACTACCGTC
ATAAGCAAGATGGATGGGAAAGGCAAACTTCCCGCTCAACCGGACCATGTTAATGTAAGTGCCATTTCACTAAGAAGTGTAACTTCCAAACTCTTACCTCTTAAT
AGTAAGAATCAGTCCAAGGAAGAAAAGGTTGAAACAAACTCCTCATCATCTAATTCTAAAAATGATAAATCTCCTCTTAATGATTTTACTCCTTACATACCTAAG
CCTCCTTTTCCCTCTAGGTTGGCTCCAAAAAAGAAGGAAACACCCAAAAAGGAAGAACTCTTGAAGATGTTTAAAAAGGTGCAAATCAACTTGCCCCTTCTCGAT
GCAATCCAACAAGTCCCGAGGTATGCAAAGTTTCTAAAGGAGTTGTGTACCAACAAGAGGAAAACAAAAGAAAGAGCAATGGTAAGTCAAAATGTTTCAGCTCTT
CTAAAGAGTAATATTCCGGAAAAATGCAATGACCCCGATATGTTTTCTCTACCTTGTGTAATAAGAAATAGACTAATTTCTCATGCAATGCTTGACTTAGGAGCA
TCCATAAATGTCATGCCATACAACGTCTTTAAAGATCTAGAACTCAATAATTCGTAA
Protein sequenceShow/hide protein sequence
MGEEPKFCGTHHLSLTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHALATNTLSFQQKMKQQMTQLTTVISKMDGKGKLPAQPDHVNVSAISLRSVTSKLLPLN
SKNQSKEEKVETNSSSSNSKNDKSPLNDFTPYIPKPPFPSRLAPKKKETPKKEELLKMFKKVQINLPLLDAIQQVPRYAKFLKELCTNKRKTKERAMVSQNVSAL
LKSNIPEKCNDPDMFSLPCVIRNRLISHAMLDLGASINVMPYNVFKDLELNNS