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Pay0022499 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022499
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCoatomer subunit beta'
Genome locationchr11:11119596..11120250
RNA-Seq ExpressionPay0022499
SyntenyPay0022499
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0005198 - structural molecule activity (molecular function)
InterPro domainsIPR006692 - Coatomer, WD associated region


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062345.1 coatomer subunit beta'-2-like isoform X3 [Cucumis melo var. makuwa]1.2e-6495.38Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF
        MKSKELSLFYV PLLAEHIYGGTLLAMC+N FICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVS YLDSGRPVDEQGVEDAF
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF

Query:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN
        ELLHEVNERARTGLWVGDCFIY NSSWRLN
Subjt:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN

XP_008447490.1 PREDICTED: coatomer subunit beta'-2-like isoform X1 [Cucumis melo]3.4e-5997.39Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHIYGGTLLAMCSN FICFYDWAE RLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSWRLN
Subjt:  VGDCFIYNNSSWRLN

XP_008447491.1 PREDICTED: coatomer subunit beta'-2-like isoform X2 [Cucumis melo]3.4e-5997.39Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHIYGGTLLAMCSN FICFYDWAE RLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSWRLN
Subjt:  VGDCFIYNNSSWRLN

XP_008460512.2 PREDICTED: coatomer subunit beta'-1-like [Cucumis melo]9.9e-6796.15Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF
        MKSKELSLFYV PLLAEHIYGGTLLAMC+N FICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVS YLDSGRPVDEQGVEDAF
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF

Query:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN
        ELLHEVNERARTGLWVGDCFIYNNSSWRLN
Subjt:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN

XP_016901863.1 PREDICTED: coatomer subunit beta'-1-like [Cucumis melo]2.6e-6796.92Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF
        MKSKELSLFYVVPLL EHIYGGTLLAMCSN FICFYDWAEGRLI RIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVED F
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF

Query:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN
        ELLHEVNERARTGLWVGDCFIYNNSSWRLN
Subjt:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN

TrEMBL top hitse value%identityAlignment
A0A1S3BIG1 Coatomer subunit beta'1.7e-5997.39Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHIYGGTLLAMCSN FICFYDWAE RLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSWRLN
Subjt:  VGDCFIYNNSSWRLN

A0A1S3CDW5 coatomer subunit beta'-1-like4.8e-6796.15Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF
        MKSKELSLFYV PLLAEHIYGGTLLAMC+N FICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVS YLDSGRPVDEQGVEDAF
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF

Query:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN
        ELLHEVNERARTGLWVGDCFIYNNSSWRLN
Subjt:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN

A0A1S4E0W2 coatomer subunit beta'-1-like1.3e-6796.92Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF
        MKSKELSLFYVVPLL EHIYGGTLLAMCSN FICFYDWAEGRLI RIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVED F
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF

Query:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN
        ELLHEVNERARTGLWVGDCFIYNNSSWRLN
Subjt:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN

A0A5A7UAX5 Coatomer subunit beta'-2-like isoform X11.7e-5997.39Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHIYGGTLLAMCSN FICFYDWAE RLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSWRLN
Subjt:  VGDCFIYNNSSWRLN

A0A5A7V8X3 Coatomer subunit beta'-2-like isoform X35.9e-6595.38Show/hide
Query:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF
        MKSKELSLFYV PLLAEHIYGGTLLAMC+N FICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRDAVS YLDSGRPVDEQGVEDAF
Subjt:  MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAF

Query:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN
        ELLHEVNERARTGLWVGDCFIY NSSWRLN
Subjt:  ELLHEVNERARTGLWVGDCFIYNNSSWRLN

SwissProt top hitse value%identityAlignment
Q5VQ78 Coatomer subunit beta'-12.1e-5686.96Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AE I+GG LLAMCS+ FICFYDWA+ RLIRRIDVNVKNLYWADSGDLVAIA+DTSFYILKYNRD V+SYL+SG+PVDE+GVEDAFELLHEVNER RTG+W
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSWRLN
Subjt:  VGDCFIYNNSSWRLN

Q6H8D5 Coatomer subunit beta'-22.9e-5382.2Show/hide
Query:  PLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERART
        P  AE I+GG LLAMC+N FICF+DWAEGR+IRRIDVNVKNLYWADSGDLV IA+DTSFYILKYNRD VSS+LD G  V E+GVEDAFELLHE+NER RT
Subjt:  PLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERART

Query:  GLWVGDCFIYNNSSWRLN
        GLWVGDCFIYNNSS RLN
Subjt:  GLWVGDCFIYNNSSWRLN

Q6H8D6 Putative coatomer subunit beta'-32.9e-5382.2Show/hide
Query:  PLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERART
        P  AE I+GG LLAMC+N FICF+DWAEGR+IRRIDVNVKNLYWADSGDLV IA+DTSFYILKYNRD VSS+LD G  V E+GVEDAFELLHE+NER RT
Subjt:  PLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERART

Query:  GLWVGDCFIYNNSSWRLN
        GLWVGDCFIYNNSS RLN
Subjt:  GLWVGDCFIYNNSSWRLN

Q8L828 Coatomer subunit beta'-38.5e-5381.74Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AE I+GGTLLAMCSN FICFYDWAE RLI++IDV VKNLYWA+SGDLVAIA+DTSFYILKYNR+ VSS+ DSGRP DE+GVEDAFE+LHE +ER RTG+W
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSW+LN
Subjt:  VGDCFIYNNSSWRLN

Q9CAA0 Coatomer subunit beta'-11.3e-5382.61Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHI+GGTLL MCS+ FICFYDWAE RLIRRIDV VKNLYWADSGDLVAIA+DTSFYILK+NRD VSSY D G+ +DE+G+EDAFELL+E NER RTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIY NSSWRLN
Subjt:  VGDCFIYNNSSWRLN

Arabidopsis top hitse value%identityAlignment
AT1G79990.1 structural molecules9.3e-5582.61Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHI+GGTLL MCS+ FICFYDWAE RLIRRIDV VKNLYWADSGDLVAIA+DTSFYILK+NRD VSSY D G+ +DE+G+EDAFELL+E NER RTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIY NSSWRLN
Subjt:  VGDCFIYNNSSWRLN

AT1G79990.3 structural molecules9.3e-5582.61Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHI+GGTLL MCS+ FICFYDWAE RLIRRIDV VKNLYWADSGDLVAIA+DTSFYILK+NRD VSSY D G+ +DE+G+EDAFELL+E NER RTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIY NSSWRLN
Subjt:  VGDCFIYNNSSWRLN

AT1G79990.5 structural molecules9.3e-5582.61Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AEHI+GGTLL MCS+ FICFYDWAE RLIRRIDV VKNLYWADSGDLVAIA+DTSFYILK+NRD VSSY D G+ +DE+G+EDAFELL+E NER RTGLW
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIY NSSWRLN
Subjt:  VGDCFIYNNSSWRLN

AT3G15980.1 Coatomer, beta' subunit6.0e-5481.74Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AE I+GGTLLAMCSN FICFYDWAE RLI++IDV VKNLYWA+SGDLVAIA+DTSFYILKYNR+ VSS+ DSGRP DE+GVEDAFE+LHE +ER RTG+W
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSW+LN
Subjt:  VGDCFIYNNSSWRLN

AT3G15980.2 Coatomer, beta' subunit6.0e-5481.74Show/hide
Query:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW
        AE I+GGTLLAMCSN FICFYDWAE RLI++IDV VKNLYWA+SGDLVAIA+DTSFYILKYNR+ VSS+ DSGRP DE+GVEDAFE+LHE +ER RTG+W
Subjt:  AEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERARTGLW

Query:  VGDCFIYNNSSWRLN
        VGDCFIYNNSSW+LN
Subjt:  VGDCFIYNNSSWRLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTAAGGAACTATCATTATTTTATGTTGTTCCATTGTTAGCCGAGCACATCTATGGAGGAACTCTGTTAGCCATGTGTTCCAATGTTTTTATATGTTTCTATGA
TTGGGCAGAGGGCAGACTGATCCGTCGTATTGATGTAAATGTGAAGAACCTTTATTGGGCTGATAGTGGTGATTTGGTGGCAATAGCCAATGATACATCATTTTATATCC
TGAAGTACAATCGTGATGCAGTCTCTTCCTATTTAGATAGTGGAAGGCCTGTTGATGAACAAGGGGTTGAAGATGCATTTGAGCTCCTGCATGAAGTGAATGAACGGGCA
AGGACTGGCCTTTGGGTTGGGGATTGCTTCATTTACAACAATTCTTCCTGGAGACTGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTAAGGAACTATCATTATTTTATGTTGTTCCATTGTTAGCCGAGCACATCTATGGAGGAACTCTGTTAGCCATGTGTTCCAATGTTTTTATATGTTTCTATGA
TTGGGCAGAGGGCAGACTGATCCGTCGTATTGATGTAAATGTGAAGAACCTTTATTGGGCTGATAGTGGTGATTTGGTGGCAATAGCCAATGATACATCATTTTATATCC
TGAAGTACAATCGTGATGCAGTCTCTTCCTATTTAGATAGTGGAAGGCCTGTTGATGAACAAGGGGTTGAAGATGCATTTGAGCTCCTGCATGAAGTGAATGAACGGGCA
AGGACTGGCCTTTGGGTTGGGGATTGCTTCATTTACAACAATTCTTCCTGGAGACTGAACTAA
Protein sequenceShow/hide protein sequence
MKSKELSLFYVVPLLAEHIYGGTLLAMCSNVFICFYDWAEGRLIRRIDVNVKNLYWADSGDLVAIANDTSFYILKYNRDAVSSYLDSGRPVDEQGVEDAFELLHEVNERA
RTGLWVGDCFIYNNSSWRLN