CuGenDBv2

Gene ID	Pay0022584
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	40S ribosomal protein S27
Genome location	chr11:26033150..26034476
RNA-Seq Expression	Pay0022584
Synteny	Pay0022584
Gene Ontology terms	GO:0000028 - ribosomal small subunit assembly (biological process) GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000592 - Ribosomal protein S27 IPR011332 - Zinc-binding ribosomal protein IPR023407 - Ribosomal protein S27, zinc-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

EYU26951.1 hypothetical protein MIMGU_mgv1a017251mg [Erythranthe guttata]

1.1e-26

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

KAF5954918.1 hypothetical protein HYC85_007774 [Camellia sinensis]

1.1e-26

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

XP_012849864.1 PREDICTED: 40S ribosomal protein S27-2-like, partial [Erythranthe guttata]

1.1e-26

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

XP_016903102.1 PREDICTED: 40S ribosomal protein S27-2-like [Cucumis melo]

3.0e-40

97.62

Show/hide

Query:  MEFNCCYCFIVYSIFMKREHKLKRLVQSPNSFMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        MEFNCCYCFIVYSIFMKREHKLKRLVQSPNSFMDVKCQGCFNITTVF HSQIVVVCGNCQTVLSQPT GRARLTESCSFRRKGD
Subjt:  MEFNCCYCFIVYSIFMKREHKLKRLVQSPNSFMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

XP_021623458.1 40S ribosomal protein S27-2-like [Manihot esculenta]

1.1e-26

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E4F5 40S ribosomal protein S27-2-like

1.4e-40

97.62

Show/hide

Query:  MEFNCCYCFIVYSIFMKREHKLKRLVQSPNSFMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        MEFNCCYCFIVYSIFMKREHKLKRLVQSPNSFMDVKCQGCFNITTVF HSQIVVVCGNCQTVLSQPT GRARLTESCSFRRKGD
Subjt:  MEFNCCYCFIVYSIFMKREHKLKRLVQSPNSFMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

A0A251RMF3 40S ribosomal protein S27

5.3e-27

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

A0A2G9GMY8 40S ribosomal protein S27

5.3e-27

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

A0A6J1JTM3 40S ribosomal protein S27

5.3e-27

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

M5XFZ8 40S ribosomal protein S27

5.3e-27

91.3

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT GRARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

SwissProt top hits

e value

%identity

Alignment

O64650 40S ribosomal protein S27-1

9.7e-26

82.09

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VV+CGNCQT+L  PT G+A+LTE CSFR+K
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK

P47903 40S ribosomal protein S27

1.7e-22

75.36

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        K +HK KRLVQSPNS FMDVKCQGCFNITTVFSHSQ VV+CG+C +VL  PT    RLTE CSFRRK D
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

Q8L953 40S ribosomal protein S27-3

8.8e-27

86.57

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT G+ARL E CSFR+K
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK

Q96564 40S ribosomal protein S27

4.4e-26

84.06

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        K +HK KRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVC  CQTVL QPT G+ARLTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

Q9M2F1 40S ribosomal protein S27-2

9.4e-29

86.96

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQT+L QPT G+A+LTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

Arabidopsis top hits

e value

%identity

Alignment

AT2G45710.1 Zinc-binding ribosomal protein family protein

6.9e-27

82.09

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VV+CGNCQT+L  PT G+A+LTE CSFR+K
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK

AT3G61110.1 ribosomal protein S27

6.7e-30

86.96

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQT+L QPT G+A+LTE CSFRRKGD
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

AT3G61111.1 Zinc-binding ribosomal protein family protein

1.9e-21

69.57

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD
        KR+HKLKRLV SPNS FM V+C  C NITT+FSHSQ VVVCG CQ VL QPT G+A+LT  CSFR+  D
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

AT5G47930.1 Zinc-binding ribosomal protein family protein

6.2e-28

86.57

Show/hide

Query:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK
        KR+HKLKRLVQSPNS FMDVKCQGCFNITTVFSHSQ VVVCGNCQTVL QPT G+ARL E CSFR+K
Subjt:  KREHKLKRLVQSPNS-FMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGTTCAATTGTTGTTACTGCTTTATTGTTTATTCTATATTTATGAAGAGGGAGCACAAACTCAAGCGTCTTGTGCAATCACCCAACTCCTTCATGGACGTC
AAGTGCCAAGGATGTTTCAACATTACCACTGTCTTCAGCCACTCTCAAATTGTTGTGGTATGCGGTAACTGTCAAACAGTCTTATCCCAGCCAACAGAAGGACGT
GCTAGACTCACCGAGTCGTGTTCTTTTAGGAGAAAGGGTGATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEFNCCYCFIVYSIFMKREHKLKRLVQSPNSFMDVKCQGCFNITTVFSHSQIVVVCGNCQTVLSQPTEGRARLTESCSFRRKGD

Pay0022584 (gene) of Melon (Payzawat) v1 genome