CuGenDBv2

Gene ID	Pay0022585
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	CCHC-type domain-containing protein
Genome location	chr12:15133050..15133902
RNA-Seq Expression	Pay0022585
Synteny	Pay0022585
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035842.1 uncharacterized protein E6C27_scaffold56G00030 [Cucumis melo var. makuwa]

1.9e-68

90.85

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAKEVWDALQKKYD EE GSKKYNV+RYL+Y+M DDKSVE+QSHEIQKIAHEIISEGMPLDDQFQ VVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSR
        RLRIEEE RKHDKKEEVN IPRKK +A+LKPDLKPKGNKMKRGSNKQNNPQS+
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSR

KAA0042384.1 pol polyprotein [Cucumis melo var. makuwa]

5.8e-81

79.62

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRM DDKS+E+QSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW
        RLRIEEEARKHDKKEEVNAIPRKKPT ILKPDLK KGNKMKRG                     NRSCPTAQANLIEDELVAMISEVNV+G  +  GW+ 
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW

Query:  RSRTEIHIRQD
         +    H+  D
Subjt:  RSRTEIHIRQD

KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]

3.4e-73

72.99

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGMPLDDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L T
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW
        RLRIEEEA+KHDKKEEVNAIPRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+ELVAMISEVNV+GG +  GW+ 
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW

Query:  RSRTEIHIRQD
         +    H+  D
Subjt:  RSRTEIHIRQD

KAA0067915.1 putative Polyprotein [Cucumis melo var. makuwa]

4.0e-82

76.02

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Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAKEVWD LQKKYDTEEA  KKY +++YLRY+M D+K VE+QSHEIQKIAHEIISEGMPLDDQFQV VIIDKLPPLWKDFKNTLRHKTKEF LESLIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAP----------GHLARNCRNRSCPTAQANLIEDELVAMISEVNVM
        RL IEEE RKHDKKEEVNAIP+KKPT +LK DLKPKGNKMKRGSNKQNNPQS+S            GHLARNCRNRS P AQANLIE+ELVAMI EVNV+
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAP----------GHLARNCRNRSCPTAQANLIEDELVAMISEVNVM

Query:  GGLKVGGWYWRSRTEIHIRQD
        GG +  GW+  +    H+  D
Subjt:  GGLKVGGWYWRSRTEIHIRQD

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]

2.0e-73

72.51

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Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGMPLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW
        RL+IEEEA+K DKK+EVNAIPRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+ELVAMISEVNV+GG +  GW+ 
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW

Query:  RSRTEIHIRQD
         +    H+  D
Subjt:  RSRTEIHIRQD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SXC2 Uncharacterized protein

9.3e-69

90.85

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAKEVWDALQKKYD EE GSKKYNV+RYL+Y+M DDKSVE+QSHEIQKIAHEIISEGMPLDDQFQ VVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSR
        RLRIEEE RKHDKKEEVN IPRKK +A+LKPDLKPKGNKMKRGSNKQNNPQS+
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSR

A0A5A7TG34 Pol polyprotein

2.8e-81

79.62

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRM DDKS+E+QSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW
        RLRIEEEARKHDKKEEVNAIPRKKPT ILKPDLK KGNKMKRG                     NRSCPTAQANLIEDELVAMISEVNV+G  +  GW+ 
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW

Query:  RSRTEIHIRQD
         +    H+  D
Subjt:  RSRTEIHIRQD

A0A5A7UA92 Uncharacterized protein

1.6e-73

72.99

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGMPLDDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L T
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW
        RLRIEEEA+KHDKKEEVNAIPRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+ELVAMISEVNV+GG +  GW+ 
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW

Query:  RSRTEIHIRQD
         +    H+  D
Subjt:  RSRTEIHIRQD

A0A5A7VQD4 Putative Polyprotein

1.9e-82

76.02

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAKEVWD LQKKYDTEEA  KKY +++YLRY+M D+K VE+QSHEIQKIAHEIISEGMPLDDQFQV VIIDKLPPLWKDFKNTLRHKTKEF LESLIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAP----------GHLARNCRNRSCPTAQANLIEDELVAMISEVNVM
        RL IEEE RKHDKKEEVNAIP+KKPT +LK DLKPKGNKMKRGSNKQNNPQS+S            GHLARNCRNRS P AQANLIE+ELVAMI EVNV+
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAP----------GHLARNCRNRSCPTAQANLIEDELVAMISEVNVM

Query:  GGLKVGGWYWRSRTEIHIRQD
        GG +  GW+  +    H+  D
Subjt:  GGLKVGGWYWRSRTEIHIRQD

A0A5D3BDS3 Uncharacterized protein

9.6e-74

72.51

Show/hide

Query:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT
        MTTAK+VW+ALQKKYDTEEAGSKKY V+RYLRY+M DD+SVE+QSHEIQKIAHEII+EGMPLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LIT
Subjt:  MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLIT

Query:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW
        RL+IEEEA+K DKK+EVNAIPRKK TA+LK DLKPKGNKMK+G NKQNNPQS                 T+ ANLIE+ELVAMISEVNV+GG +  GW+ 
Subjt:  RLRIEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYW

Query:  RSRTEIHIRQD
         +    H+  D
Subjt:  RSRTEIHIRQD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

5.1e-11

29.89

Show/hide

Query:  AKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLR
        AKE+WD L+  Y  +E+ SK+  V +Y+ +RM +++ +  Q     KIA  I+S GM LD+ F V  II K PP W+ F   L  + +   +  L+ R++
Subjt:  AKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLR

Query:  IEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSN----KQNNPQ----------SRSAPGHLARNC
         EEE  ++  K     +  +  T   + +  P      RGS     K+  P+          +    GHLA++C
Subjt:  IEEEARKHDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSN----KQNNPQ----------SRSAPGHLARNC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTACTGCAAAAGAAGTGTGGGATGCGCTACAAAAGAAGTACGATACTGAGGAAGCGGGGTCGAAGAAGTACAATGTCAATCGATACTTAAGATATCGAATGGAGGA
TGACAAATCCGTGGAGTCACAGTCACATGAAATCCAGAAAATAGCCCACGAGATTATTAGTGAAGGTATGCCACTCGATGATCAATTTCAAGTTGTTGTTATTATTGATA
AATTACCTCCATTGTGGAAGGATTTCAAGAACACCTTAAGGCACAAAACCAAGGAGTTCTCACTAGAAAGTCTAATCACGAGGCTAAGGATAGAGGAGGAAGCAAGGAAG
CATGATAAAAAAGAAGAGGTGAACGCTATCCCTAGAAAGAAGCCCACTGCAATTCTAAAACCAGATCTGAAGCCGAAAGGAAACAAGATGAAACGAGGATCCAACAAACA
AAACAACCCACAGTCTAGAAGTGCGCCTGGTCATTTAGCTAGAAATTGTAGAAACAGGAGTTGTCCTACAGCGCAGGCGAACCTGATAGAAGATGAATTAGTAGCTATGA
TATCTGAAGTTAATGTGATGGGGGGTCTGAAGGTTGGTGGCTGGTATTGGAGAAGTAGAACTGAAATTCACATCCGACAAGACGCTTGTGCTGAAGGAAGTTTTGCATAC
TTCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTTCTCAACAAGGCTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MTTAKEVWDALQKKYDTEEAGSKKYNVNRYLRYRMEDDKSVESQSHEIQKIAHEIISEGMPLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARK
HDKKEEVNAIPRKKPTAILKPDLKPKGNKMKRGSNKQNNPQSRSAPGHLARNCRNRSCPTAQANLIEDELVAMISEVNVMGGLKVGGWYWRSRTEIHIRQDACAEGSFAY
FRNSKEFGLRISSQQG

Pay0022585 (gene) of Melon (Payzawat) v1 genome