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Pay0022618 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022618
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr06:27464703..27465285
RNA-Seq ExpressionPay0022618
SyntenyPay0022618
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain
IPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035729.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.5e-4063.03Show/hide
Query:  MTTPESSTCGSSNS---STPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGS--SNYSSWSRAMKLGLSGKNKIGFITRCNNDVIASWIINYILKEIVA
        MTTPESST G+ NS   S PITSS+LDAQ+N F LHHS+IPTTNLVSTP AGS  S  S+W                  RCNNDVIASWIIN I KEI A
Subjt:  MTTPESSTCGSSNS---STPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGS--SNYSSWSRAMKLGLSGKNKIGFITRCNNDVIASWIINYILKEIVA

Query:  SL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMD
        SL          D+LKERY QSN PHIY+L+KDLVTTTQGNL VE++Y KITTIWQELVEY+ M+
Subjt:  SL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMD

KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.5e-3547.03Show/hide
Query:  ESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFITR---------------CNNDVIASWIINYI
        +SST GS        +S+ DAQLN + +HHS+ PT  +V+ P  G+ NY+SWSRAM + +SG+NK GFIT                CNND++ASWI+N +
Subjt:  ESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFITR---------------CNNDVIASWIINYI

Query:  LKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDFL
         KEI AS+          DEL++R+ QSN P IYQL+K+ VT  QGNL++E +Y K+ TIWQ L EYR  ++CT  GLK  ID L
Subjt:  LKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDFL

XP_022145891.1 uncharacterized protein LOC111015239 [Momordica charantia]8.1e-3746.24Show/hide
Query:  TTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT--------------RCNNDVIASWIIN
        + P SST G++          +++QLN +++HHS  PTT LV+    G+SNY+SW R+M + LSGKNK+GFI               +CNND+I SWIIN
Subjt:  TTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT--------------RCNNDVIASWIIN

Query:  YILKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDF
         + KEI AS+          DELKER+ QS+ P I+QL+K+LVTT QG LS+E +Y K+ T+WQEL +YRP  +CT  GLK + +F
Subjt:  YILKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDF

XP_031745063.1 uncharacterized protein LOC116405242 [Cucumis sativus]1.2e-5371.86Show/hide
Query:  MTTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT---RCNNDVIASWIINYILKEIVASL
        MTTPESST  SSN S PITSS LD QLN F+LHHS+ PTTNLVSTP AGS+NYSSWSRAM L LSGKNK+GFIT   +  ++  +    N  +KE+    
Subjt:  MTTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT---RCNNDVIASWIINYILKEIVASL

Query:  DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDFL
        DELKERY QSN PHIYQLQKDLVTTTQG+LSVEI+Y KITTIWQELVEYRPMDECT E  KKM+DFL
Subjt:  DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDFL

XP_038888312.1 uncharacterized protein LOC120078158 [Benincasa hispida]3.9e-3164.46Show/hide
Query:  RAMKLGLSGKNKIGFIT---------------RCNNDVIASWIINYILKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIH
        + MKL LSGKNKIGFIT               RCNNDVI SWIIN + KEI  SL          DELKERY QSN PHIYQL+KDL TTTQGNLSVE++
Subjt:  RAMKLGLSGKNKIGFIT---------------RCNNDVIASWIINYILKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIH

Query:  YEKITTIWQELVEYRPMDECT
        Y KITTIWQELVEYRP D+CT
Subjt:  YEKITTIWQELVEYRPMDECT

TrEMBL top hitse value%identityAlignment
A0A5A7T2X0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-4063.03Show/hide
Query:  MTTPESSTCGSSNS---STPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGS--SNYSSWSRAMKLGLSGKNKIGFITRCNNDVIASWIINYILKEIVA
        MTTPESST G+ NS   S PITSS+LDAQ+N F LHHS+IPTTNLVSTP AGS  S  S+W                  RCNNDVIASWIIN I KEI A
Subjt:  MTTPESSTCGSSNS---STPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGS--SNYSSWSRAMKLGLSGKNKIGFITRCNNDVIASWIINYILKEIVA

Query:  SL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMD
        SL          D+LKERY QSN PHIY+L+KDLVTTTQGNL VE++Y KITTIWQELVEY+ M+
Subjt:  SL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMD

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 87.4e-3647.03Show/hide
Query:  ESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFITR---------------CNNDVIASWIINYI
        +SST GS        +S+ DAQLN + +HHS+ PT  +V+ P  G+ NY+SWSRAM + +SG+NK GFIT                CNND++ASWI+N +
Subjt:  ESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFITR---------------CNNDVIASWIINYI

Query:  LKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDFL
         KEI AS+          DEL++R+ QSN P IYQL+K+ VT  QGNL++E +Y K+ TIWQ L EYR  ++CT  GLK  ID L
Subjt:  LKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDFL

A0A5D3BW06 Cysteine-rich RLK (Receptor-like protein kinase) 82.3e-2996Show/hide
Query:  MTTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFITR
        MTTPESSTCGSS SSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGS  YSSWSRAMKLGLSGKNKIGFITR
Subjt:  MTTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFITR

A0A5D3C350 UBN2_3 domain-containing protein3.7e-2763.72Show/hide
Query:  MTTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT----------------RCNNDVIASW
        MTT E+ST G+SN+   ITSS +DA LN F+LHHS+IPTTNLVSTP+ GS+NYSSWSRAM L LSGKNK+GFIT                +CNND IASW
Subjt:  MTTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT----------------RCNNDVIASW

Query:  IINYILKEIVASL
        IIN I KEI ASL
Subjt:  IINYILKEIVASL

A0A6J1CXR2 uncharacterized protein LOC1110152393.9e-3746.24Show/hide
Query:  TTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT--------------RCNNDVIASWIIN
        + P SST G++          +++QLN +++HHS  PTT LV+    G+SNY+SW R+M + LSGKNK+GFI               +CNND+I SWIIN
Subjt:  TTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFIT--------------RCNNDVIASWIIN

Query:  YILKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDF
         + KEI AS+          DELKER+ QS+ P I+QL+K+LVTT QG LS+E +Y K+ T+WQEL +YRP  +CT  GLK + +F
Subjt:  YILKEIVASL----------DELKERYWQSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2.4e-0726.32Show/hide
Query:  LHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFI-----------------TRCNNDVIASWIINYILKEIVASL--DELKERYWQSNRP--
        +HH   P+   +        NY +W    +  L    K GFI                  +C N ++  W++N +  +++ S+   E   + W+  R   
Subjt:  LHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFI-----------------TRCNNDVIASWIINYILKEIVASL--DELKERYWQSNRP--

Query:  ------HIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEG
               IYQL++ L T  QG  SVE ++ K++ +W EL EY P+ EC   G
Subjt:  ------HIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACACCTGAGAGTTCGACATGTGGCAGCTCCAACTCCTCAACTCCAATCACCTCTTCTAAACTCGATGCCCAACTAAATCATTTCATTCTTCACCATTCG
GTTATTCCGACCACTAACTTGGTTTCTACACCACGTGCAGGATCAAGCAACTACTCTTCATGGAGTAGAGCAATGAAACTTGGACTGTCAGGGAAGAACAAGATT
GGATTCATTACGAGATGTAATAACGATGTGATAGCCTCATGGATTATTAATTACATTTTAAAAGAAATCGTTGCTAGCTTAGATGAGTTAAAAGAGAGATATTGG
CAGTCTAATAGGCCACATATATACCAACTACAGAAAGACCTTGTAACTACCACCCAAGGAAATCTTTCAGTTGAGATACATTACGAAAAGATCACCACCATATGG
CAGGAACTTGTTGAATATAGACCCATGGATGAATGCACATATGAAGGGTTAAAGAAGATGATTGATTTTTTAATGCAGAGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACACCTGAGAGTTCGACATGTGGCAGCTCCAACTCCTCAACTCCAATCACCTCTTCTAAACTCGATGCCCAACTAAATCATTTCATTCTTCACCATTCG
GTTATTCCGACCACTAACTTGGTTTCTACACCACGTGCAGGATCAAGCAACTACTCTTCATGGAGTAGAGCAATGAAACTTGGACTGTCAGGGAAGAACAAGATT
GGATTCATTACGAGATGTAATAACGATGTGATAGCCTCATGGATTATTAATTACATTTTAAAAGAAATCGTTGCTAGCTTAGATGAGTTAAAAGAGAGATATTGG
CAGTCTAATAGGCCACATATATACCAACTACAGAAAGACCTTGTAACTACCACCCAAGGAAATCTTTCAGTTGAGATACATTACGAAAAGATCACCACCATATGG
CAGGAACTTGTTGAATATAGACCCATGGATGAATGCACATATGAAGGGTTAAAGAAGATGATTGATTTTTTAATGCAGAGTTTGTAA
Protein sequenceShow/hide protein sequence
MTTPESSTCGSSNSSTPITSSKLDAQLNHFILHHSVIPTTNLVSTPRAGSSNYSSWSRAMKLGLSGKNKIGFITRCNNDVIASWIINYILKEIVASLDELKERYW
QSNRPHIYQLQKDLVTTTQGNLSVEIHYEKITTIWQELVEYRPMDECTYEGLKKMIDFLMQSL