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Pay0022652 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022652
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic
Genome locationchr03:13368140..13383634
RNA-Seq ExpressionPay0022652
SyntenyPay0022652
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF0895595.1 hypothetical protein E2562_013904 [Oryza meyeriana var. granulata]8.4e-0670.73Show/hide
Query:  SMLGSQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        S   ++VEKS  RVEDGIFGTS GIGFTK+NELF+ RVA L
Subjt:  SMLGSQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]3.2e-0575Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
XP_008466710.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo]3.2e-0575Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
XP_010242794.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Nelumbo nucifera]2.5e-0572.97Show/hide
Query:  SQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        ++VEK  ++VEDGIFGTS GIGFTKQNELF+ RVA L
Subjt:  SQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
XP_019415222.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic-like [Lupinus angustifolius]3.2e-0575Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein1.6e-0575Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
A0A1U7YRI3 photosystem II 22 kDa protein, chloroplastic1.2e-0572.97Show/hide
Query:  SQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        ++VEK  ++VEDGIFGTS GIGFTKQNELF+ RVA L
Subjt:  SQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
A0A4P1QZ25 Uncharacterized protein1.6e-0575Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
A0A5A7UZ08 Photosystem II 22 kDa protein1.6e-0575Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
A0A6G1C4K9 Uncharacterized protein4.1e-0670.73Show/hide
Query:  SMLGSQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        S   ++VEKS  RVEDGIFGTS GIGFTK+NELF+ RVA L
Subjt:  SMLGSQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic4.6e-0775.76Show/hide
Query:  KSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        K  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  KSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
Q02060 Photosystem II 22 kDa protein, chloroplastic1.0e-0666.67Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK   +VEDG+FGTS GIGFTK+NELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
Q9FPP4 Photosystem II 22 kDa protein, chloroplastic4.6e-0775.76Show/hide
Query:  KSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        K  Q+VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  KSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
Q9SMB4 Photosystem II 22 kDa protein, chloroplastic6.1e-0771.43Show/hide
Query:  VEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        V K  ++VEDGIFGTS GIGFTKQNELF+ RVA +
Subjt:  VEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
Q9XF91 Photosystem II 22 kDa protein, chloroplastic7.9e-0769.44Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK   +VEDGIFGTS GIGFTK NELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein5.6e-0869.44Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK   +VEDGIFGTS GIGFTK NELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
AT1G44575.2 Chlorophyll A-B binding family protein5.6e-0869.44Show/hide
Query:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL
        +VEK   +VEDGIFGTS GIGFTK NELF+ RVA +
Subjt:  QVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGAAGATTTTTGCCTAAGTACAAGGAGTTGGGCGTGATGAGCATGTTAGGCAGCCAAGTTGAAAAGTCGAACCAGAGGGTTGAAGATGGAATTTTTGGGACTTC
TAATGGCATTGGTTTTACTAAGCAAAATGAACTCTTCATCGACCGTGTTGCTCGGCTTTGCTGTAAGAAGCAACTTAACGTCTTCATCCATAGAGACAACGACTTTAATT
CTTTTTATTGTCTCTGTTTTGCCATTGTTGAGGTAGAAGATCTATTTCATTTTCACTATGGCAATAGAAACGTTGAAGATCTACAAGTTGCTGCTTTGGGGTGTTTCTTT
ATAAGCCAAACTTTTGAGCAGAATAAAGGAAATGACACGAGTAGATTTGAAGCTCTCCTTCTCCAAAGTTCCCTATCTGTAGAAGTTCTTGCATGGTCTGATGATGACAC
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAGAAGATTTTTGCCTAAGTACAAGGAGTTGGGCGTGATGAGCATGTTAGGCAGCCAAGTTGAAAAGTCGAACCAGAGGGTTGAAGATGGAATTTTTGGGACTTC
TAATGGCATTGGTTTTACTAAGCAAAATGAACTCTTCATCGACCGTGTTGCTCGGCTTTGCTGTAAGAAGCAACTTAACGTCTTCATCCATAGAGACAACGACTTTAATT
CTTTTTATTGTCTCTGTTTTGCCATTGTTGAGGTAGAAGATCTATTTCATTTTCACTATGGCAATAGAAACGTTGAAGATCTACAAGTTGCTGCTTTGGGGTGTTTCTTT
ATAAGCCAAACTTTTGAGCAGAATAAAGGAAATGACACGAGTAGATTTGAAGCTCTCCTTCTCCAAAGTTCCCTATCTGTAGAAGTTCTTGCATGGTCTGATGATGACAC
CTAG
Protein sequenceShow/hide protein sequence
MTRRFLPKYKELGVMSMLGSQVEKSNQRVEDGIFGTSNGIGFTKQNELFIDRVARLCCKKQLNVFIHRDNDFNSFYCLCFAIVEVEDLFHFHYGNRNVEDLQVAALGCFF
ISQTFEQNKGNDTSRFEALLLQSSLSVEVLAWSDDDT