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Pay0022717 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022717
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionBEST Arabidopsis thaliana protein match is: embryo defective 1303 .
Genome locationchr06:32361106..32373385
RNA-Seq ExpressionPay0022717
SyntenyPay0022717
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0010027 - thylakoid membrane organization (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR040299 - Protein FERTILITY RESTORER RF2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148272.1 protein FERTILITY RESTORER RF2, mitochondrial [Cucumis sativus]2.1e-6177.91Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR
        MEMLTTNS  MLPLLPPVGQHWGRMKA +LPLR YSSQHQTPN RR S+ AKAGPVFLKPIPST TKGG+LCSSRKN+ FIC AALNARCAAEQTQTVTR
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFLRLSK
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG   +       F  FL L K
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFLRLSK

XP_008448993.1 PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo]1.3e-6895.1Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR
        MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG

XP_022965198.1 uncharacterized protein LOC111465127 [Cucurbita maxima]2.9e-5581.94Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT
        MEMLTTNS  ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKPIPSTGTKGG L S+RK N+ FIC AALNARCAAEQTQTVT
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG

XP_023553392.1 uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo]1.7e-5581.94Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT
        MEMLTT+S  ML LLPPVGQHWG+MKAKD  LRR S Q QTPNGRRQS+ AKAGPVFLKPIPSTGTKGG+L S+RK N+ FIC AALNARCAAEQTQTVT
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG

XP_038905031.1 protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida]3.6e-5884.62Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR
        MEMLTT+S  MLPLLPPVGQH GRMKAKDL LRRYSSQ QT NGRRQS+FAKAGPVFLKPIPSTG KGG LCSSR+N+ F+C AALNARCAAEQTQTVTR
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L2P2 Uncharacterized protein1.0e-6177.91Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR
        MEMLTTNS  MLPLLPPVGQHWGRMKA +LPLR YSSQHQTPN RR S+ AKAGPVFLKPIPST TKGG+LCSSRKN+ FIC AALNARCAAEQTQTVTR
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFLRLSK
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG   +       F  FL L K
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFLRLSK

A0A1S4DXD8 uncharacterized protein LOC1034909996.5e-6995.1Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR
        MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG

A0A5D3D747 Uncharacterized protein5.9e-5494.12Show/hide
Query:  MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGF
        MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGF
Subjt:  MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGF

Query:  PPRDDGDGNGPIFLQCGGG
        PPRDDGDG G      GGG
Subjt:  PPRDDGDGNGPIFLQCGGG

A0A6J1F258 uncharacterized protein LOC1114387812.4e-5581.25Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT
        MEMLTT+S  ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKPIPSTGTKGG+L S+RK N+ FIC AALNARCAAEQTQTVT
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG

A0A6J1HQC3 uncharacterized protein LOC1114651271.4e-5581.94Show/hide
Query:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT
        MEMLTTNS  ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKPIPSTGTKGG L S+RK N+ FIC AALNARCAAEQTQTVT
Subjt:  MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDG G      GGG
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30475.1 BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1)3.1e-1548.91Show/hide
Query:  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFL
        ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG G G      GGG   +    L  F  F+
Subjt:  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFL

AT1G30475.2 FUNCTIONS IN: molecular_function unknown3.1e-1548.91Show/hide
Query:  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFL
        ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG G G      GGG   +    L  F  F+
Subjt:  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFL

AT1G30475.3 FUNCTIONS IN: molecular_function unknown3.1e-1548.91Show/hide
Query:  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFL
        ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG G G      GGG   +    L  F  F+
Subjt:  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFL

AT1G56200.1 embryo defective 13032.3e-1849.07Show/hide
Query:  LKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWF
        + P+ + G   G+   SR+ S  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP LDDG  GFPPRDDGDG G      GGG   +       F
Subjt:  LKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWF

Query:  PCFLRLSK
          FL L K
Subjt:  PCFLRLSK

AT1G56200.2 embryo defective 13032.3e-1849.07Show/hide
Query:  LKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWF
        + P+ + G   G+   SR+ S  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP LDDG  GFPPRDDGDG G      GGG   +       F
Subjt:  LKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWF

Query:  PCFLRLSK
          FL L K
Subjt:  PCFLRLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGCTTACTACAAATTCTGCTGTGATGCTACCTCTTCTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGACTTACCTCTTAGGCGGTATAGTTC
CCAGCATCAAACTCCTAATGGGAGGAGACAATCATTGTTTGCTAAAGCAGGACCGGTATTTCTCAAACCAATTCCATCTACTGGGACGAAGGGAGGCATTCTATGTTCAA
GTAGAAAGAACAGTACTTTCATTTGTTTGGCTGCTTTGAATGCTCGATGTGCAGCGGAGCAGACCCAGACAGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCCGGC
AAGGAGAAGTCACCGCAATTGGATGATGGCGATTCTGGATTTCCACCTCGAGATGATGGTGATGGTAACGGGCCAATTTTCCTCCAATGTGGCGGCGGGCGTGAGCAGAC
TGTGGTGGTTCTTCTTCTTTGGTTTCCTTGCTTTCTTAGGCTTTCTAAAAGATAA
mRNA sequenceShow/hide mRNA sequence
CCGAGTTCAAAATACCCTACTAGAAAAAAGATCAATAATAAAAAATATTTCTTTTTCACATTAACTCTTTTCTTCTTCTTTCTTCTTGCTCTGTCCTCCTTATAAAAGAT
CGGTCGGGCCAGGAGCTTCACCGCCATATCTCTCTCCATAGCGAGACCTTCCGGAATCTCTCCTCCTTTTCTCTTAAGAAAGCTTTCCAGCATTACCCTTTTGCGCTACT
TTGTAGAGACGAAGCGCGTTCATCCTCGGCTTTCTCGTATCTCAAAAGGTTATCATCTACCCTTGTAGATGGAGATGCTTACTACAAATTCTGCTGTGATGCTACCTCTT
CTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGACTTACCTCTTAGGCGGTATAGTTCCCAGCATCAAACTCCTAATGGGAGGAGACAATCATTGTTTGC
TAAAGCAGGACCGGTATTTCTCAAACCAATTCCATCTACTGGGACGAAGGGAGGCATTCTATGTTCAAGTAGAAAGAACAGTACTTTCATTTGTTTGGCTGCTTTGAATG
CTCGATGTGCAGCGGAGCAGACCCAGACAGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCCGGCAAGGAGAAGTCACCGCAATTGGATGATGGCGATTCTGGATTT
CCACCTCGAGATGATGGTGATGGTAACGGGCCAATTTTCCTCCAATGTGGCGGCGGGCGTGAGCAGACTGTGGTGGTTCTTCTTCTTTGGTTTCCTTGCTTTCTTAGGCT
TTCTAAAAGATAAAGAAAGTGAAGGGCCATATCAGGATGATCGGAGAAGATAAATATACTTCGATTAAACATATGTAGATTCTAAATTTATACTTCAATATACAATCTCA
TGATAAACGTTTGTTTCTAGCCATGTTAAATCGCCATTAAATTCCTTTCATCCATTCACTTGCCTTAAATTTAGTATAGACCGACATAAGAACATAAAGTTCCAAAGACA
TTTGGAATTTCAGTTATCAAAGATATAGCTGGTGAGGATAAAAGGCGATGAGTTCAACTTAAGTGATATAATGGATTTTTATCCTTGTAAGACAAAAAGATAGTAAGTAT
AGAAATGGTGGTAGGCAAAACTAGGATTTCTAAGCAGGTGTGAGTTTTTGTTTGATTTTAGTATTTCTTAAAATAGAAAGTCATACTCAAATATAGCAGATAATTATATC
GATAAGATTCTAGCTTCGCGCTTGACAGATGCCCATATTTTTTTATTTTATTAGATTTATGTTTC
Protein sequenceShow/hide protein sequence
MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPG
KEKSPQLDDGDSGFPPRDDGDGNGPIFLQCGGGREQTVVVLLLWFPCFLRLSKR