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Pay0022877 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0022877
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr01:28310273..28310968
RNA-Seq ExpressionPay0022877
SyntenyPay0022877
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2086.15Show/hide
Query:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        +GISSW+QLETGEMTM+VGTGH+VSAI VG LRLCL KSFLLL ENVYVVPDL+RNLISVKCLLE
Subjt:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

KAA0051846.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]1.8e-3068.1Show/hide
Query:  MLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNM----FLLQPKRDTRRETISSTWQKRRKPNKGISSWQQLETGEMTMQV
        MLLLP+ES IE RPL+LSLCLLHLA+RSGRR+RV KEIKLT LLL +  K  +      +  KRD  RET+ STWQK+R+PNK IS  QQLETGEM MQV
Subjt:  MLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNM----FLLQPKRDTRRETISSTWQKRRKPNKGISSWQQLETGEMTMQV

Query:  GTGHIVSAIVVGELRL
        GTGH+VSAI VG LRL
Subjt:  GTGHIVSAIVVGELRL

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2086.15Show/hide
Query:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        +GISSW+QLETGEMTM+VGTGH+VSAI VG LRLCL KSFLLL ENVYVVPDL+RNLISVKCLLE
Subjt:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2086.15Show/hide
Query:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        +GISSW+QLETGEMTM+VGTGH+VSAI VG LRLCL KSFLLL ENVYVVPDL+RNLISVKCLLE
Subjt:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

XP_008451633.1 PREDICTED: uncharacterized protein LOC103492865 [Cucumis melo]1.8e-78100Show/hide
Query:  MGLSSMKPIRERQMLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNMFLLQPKRDTRRETISSTWQKRRKPNKGISSWQQL
        MGLSSMKPIRERQMLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNMFLLQPKRDTRRETISSTWQKRRKPNKGISSWQQL
Subjt:  MGLSSMKPIRERQMLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNMFLLQPKRDTRRETISSTWQKRRKPNKGISSWQQL

Query:  ETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        ETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
Subjt:  ETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

TrEMBL top hitse value%identityAlignment
A0A1S3BSS6 uncharacterized protein LOC1034928658.6e-79100Show/hide
Query:  MGLSSMKPIRERQMLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNMFLLQPKRDTRRETISSTWQKRRKPNKGISSWQQL
        MGLSSMKPIRERQMLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNMFLLQPKRDTRRETISSTWQKRRKPNKGISSWQQL
Subjt:  MGLSSMKPIRERQMLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNMFLLQPKRDTRRETISSTWQKRRKPNKGISSWQQL

Query:  ETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        ETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
Subjt:  ETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

A0A5A7SMH8 Gag/pol protein1.1e-2086.15Show/hide
Query:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        +GISSW+QLETGEMTM+VGTGH+VSAI VG LRLCL KSFLLL ENVYVVPDL+RNLISVKCLLE
Subjt:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

A0A5A7V4M1 Gag/pol protein1.1e-2086.15Show/hide
Query:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        +GISSW+QLETGEMTM+VGTGH+VSAI VG LRLCL KSFLLL ENVYVVPDL+RNLISVKCLLE
Subjt:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

A0A5D3CPJ6 Gag/pol protein1.1e-2086.15Show/hide
Query:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE
        +GISSW+QLETGEMTM+VGTGH+VSAI VG LRLCL KSFLLL ENVYVVPDL+RNLISVKCLLE
Subjt:  KGISSWQQLETGEMTMQVGTGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE

A0A5D3DD10 Retrotransposon protein, putative, Ty1-copia subclass8.7e-3168.1Show/hide
Query:  MLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNM----FLLQPKRDTRRETISSTWQKRRKPNKGISSWQQLETGEMTMQV
        MLLLP+ES IE RPL+LSLCLLHLA+RSGRR+RV KEIKLT LLL +  K  +      +  KRD  RET+ STWQK+R+PNK IS  QQLETGEM MQV
Subjt:  MLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNM----FLLQPKRDTRRETISSTWQKRRKPNKGISSWQQLETGEMTMQV

Query:  GTGHIVSAIVVGELRL
        GTGH+VSAI VG LRL
Subjt:  GTGHIVSAIVVGELRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTGTCATCGATGAAGCCTATCAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTTCATAGAAGCTCGACCTCTAGAACTAAGTTTGTGTCTTCTTCATCT
GGCACTAAGAAGTGGAAGAAGAAGAAGGGTGGTCAAGGAAATAAAGTTAACCCCGTTACTGCTAAGCCAAGGCTGCAAAGGGAATATGTTTCTATTGCAACCAAAGAGGG
ACACTAGAAGAGAAACTATCTCAAGTACTTGGCAGAAAAGAAGAAAGCCAAACAAGGGAATTAGTTCCTGGCAGCAGTTGGAGACTGGAGAGATGACGATGCAGGTTGGA
ACTGGACATATTGTCTCAGCGATTGTAGTGGGAGAGCTTCGACTTTGTTTACATAAATCTTTTCTTTTATTAGAAGAAAATGTATATGTTGTTCCTGATTTAGAAAGGAA
CTTGATTTCTGTAAAGTGCTTACTAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTGTCATCGATGAAGCCTATCAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTTCATAGAAGCTCGACCTCTAGAACTAAGTTTGTGTCTTCTTCATCT
GGCACTAAGAAGTGGAAGAAGAAGAAGGGTGGTCAAGGAAATAAAGTTAACCCCGTTACTGCTAAGCCAAGGCTGCAAAGGGAATATGTTTCTATTGCAACCAAAGAGGG
ACACTAGAAGAGAAACTATCTCAAGTACTTGGCAGAAAAGAAGAAAGCCAAACAAGGGAATTAGTTCCTGGCAGCAGTTGGAGACTGGAGAGATGACGATGCAGGTTGGA
ACTGGACATATTGTCTCAGCGATTGTAGTGGGAGAGCTTCGACTTTGTTTACATAAATCTTTTCTTTTATTAGAAGAAAATGTATATGTTGTTCCTGATTTAGAAAGGAA
CTTGATTTCTGTAAAGTGCTTACTAGAATAA
Protein sequenceShow/hide protein sequence
MGLSSMKPIRERQMLLLPQESFIEARPLELSLCLLHLALRSGRRRRVVKEIKLTPLLLSQGCKGNMFLLQPKRDTRRETISSTWQKRRKPNKGISSWQQLETGEMTMQVG
TGHIVSAIVVGELRLCLHKSFLLLEENVYVVPDLERNLISVKCLLE