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Sed0000013 (gene) of Chayote v1 genome

Gene IDSed0000013
OrganismSechium edule (Chayote v1)
Descriptionzf-LSD1 domain-containing protein
Genome locationLG02:51087604..51088771
RNA-Seq ExpressionSed0000013
SyntenySed0000013
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0043068 - positive regulation of programmed cell death (biological process)
GO:0004197 - cysteine-type endopeptidase activity (molecular function)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR033180 - Metacaspase type I, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133968.2 metacaspase-1 [Cucumis sativus]1.8e-5485.16Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV----------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG
        M+YSH PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPR+V           AP+PAPSPYNHAPPGAPAHPHGRKRAVI G+SYRYSRHELKG
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV----------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG

Query:  CLNDAKCMRYLLTNKFRFPEDSILMLTD
        CLNDAKCMRYLL NKFRFPEDSILMLT+
Subjt:  CLNDAKCMRYLLTNKFRFPEDSILMLTD

XP_008438286.1 PREDICTED: metacaspase-1 [Cucumis melo]4.4e-5383.59Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPS----------PAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG
        M+YSH PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVT VMDPR+V  PS          PAPSPYNHAPPG PAHPHGRKRAVI G+SYRYSRHELKG
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPS----------PAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG

Query:  CLNDAKCMRYLLTNKFRFPEDSILMLTD
        CLNDAKCMRYLL NKFRFPEDSILMLT+
Subjt:  CLNDAKCMRYLLTNKFRFPEDSILMLTD

XP_022924660.1 metacaspase-1 [Cucurbita moschata]1.8e-5487.1Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND
        M+Y H PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPR+       HAP PAPSPYNHAPPG PAHPHGRKRAVI GISYRYSRHELKGCLND
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND

Query:  AKCMRYLLTNKFRFPEDSILMLTD
        AKCMRYLL NKFRFPEDSILMLT+
Subjt:  AKCMRYLLTNKFRFPEDSILMLTD

XP_022980333.1 metacaspase-1 [Cucurbita maxima]6.2e-5587.9Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND
        M+Y H PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPR+V      HAP PAPSPYNHAPPG PAHPHGRKRAVI GISYRYSRHELKGCLND
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND

Query:  AKCMRYLLTNKFRFPEDSILMLTD
        AKCMRYLL NKFRFPEDSILMLT+
Subjt:  AKCMRYLLTNKFRFPEDSILMLTD

XP_038881686.1 metacaspase-1 [Benincasa hispida]2.9e-5283.33Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPSPA--------PSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCL
        M+YSH PPPMLVNCSGCRTPLQLPPGAPSIRCAIC+ VTQVMDPR+V  PSP+        PSPYNHAPPG PAHPHGRKRAVI GISYRYSRHELKGCL
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPSPA--------PSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCL

Query:  NDAKCMRYLLTNKFRFPEDSILMLTD
        NDAKCMRYLL NKF FPEDSILMLT+
Subjt:  NDAKCMRYLLTNKFRFPEDSILMLTD

TrEMBL top hitse value%identityAlignment
A0A0A0L401 zf-LSD1 domain-containing protein8.7e-5585.16Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV----------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG
        M+YSH PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPR+V           AP+PAPSPYNHAPPGAPAHPHGRKRAVI G+SYRYSRHELKG
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV----------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG

Query:  CLNDAKCMRYLLTNKFRFPEDSILMLTD
        CLNDAKCMRYLL NKFRFPEDSILMLT+
Subjt:  CLNDAKCMRYLLTNKFRFPEDSILMLTD

A0A1S3AWN8 metacaspase-12.1e-5383.59Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPS----------PAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG
        M+YSH PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVT VMDPR+V  PS          PAPSPYNHAPPG PAHPHGRKRAVI G+SYRYSRHELKG
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPS----------PAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG

Query:  CLNDAKCMRYLLTNKFRFPEDSILMLTD
        CLNDAKCMRYLL NKFRFPEDSILMLT+
Subjt:  CLNDAKCMRYLLTNKFRFPEDSILMLTD

A0A5D3D0F3 Metacaspase-12.1e-5383.59Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPS----------PAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG
        M+YSH PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVT VMDPR+V  PS          PAPSPYNHAPPG PAHPHGRKRAVI G+SYRYSRHELKG
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPS----------PAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKG

Query:  CLNDAKCMRYLLTNKFRFPEDSILMLTD
        CLNDAKCMRYLL NKFRFPEDSILMLT+
Subjt:  CLNDAKCMRYLLTNKFRFPEDSILMLTD

A0A6J1EFN1 metacaspase-18.7e-5587.1Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND
        M+Y H PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPR+       HAP PAPSPYNHAPPG PAHPHGRKRAVI GISYRYSRHELKGCLND
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND

Query:  AKCMRYLLTNKFRFPEDSILMLTD
        AKCMRYLL NKFRFPEDSILMLT+
Subjt:  AKCMRYLLTNKFRFPEDSILMLTD

A0A6J1IZ01 metacaspase-13.0e-5587.9Show/hide
Query:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND
        M+Y H PPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPR+V      HAP PAPSPYNHAPPG PAHPHGRKRAVI GISYRYSRHELKGCLND
Subjt:  MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSV------HAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLND

Query:  AKCMRYLLTNKFRFPEDSILMLTD
        AKCMRYLL NKFRFPEDSILMLT+
Subjt:  AKCMRYLLTNKFRFPEDSILMLTD

SwissProt top hitse value%identityAlignment
A6R7B8 Metacaspase-12.7e-0530.61Show/hide
Query:  APSPAPSPYNHAPPG----------APAHP------------------HGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTD
        A SP P+ YNH PPG           P  P                   G+++A+++GI+Y   R +L+GC+ND K M   L   F +  + +++LTD
Subjt:  APSPAPSPYNHAPPG----------APAHP------------------HGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTD

A7F075 Metacaspase-12.1e-0529.84Show/hide
Query:  YSHAPPPMLVNCSGCRTPLQLPPGAPSI-RCAICKAVTQVMDPRSVHAPSPAPSPYNHAPPGAP-------AHPHGRKRAVIVGISYRYSRHELKGCLND
        YS  PP      +G      +PP AP   R  +    +      + +AP P P   +    GAP       ++  GR++A+++GI+Y   R +L+GC+ND
Subjt:  YSHAPPPMLVNCSGCRTPLQLPPGAPSI-RCAICKAVTQVMDPRSVHAPSPAPSPYNHAPPGAP-------AHPHGRKRAVIVGISYRYSRHELKGCLND

Query:  AKCMRYLLTNKFRFPEDSILMLTD
         K M   L   F +  D +++LTD
Subjt:  AKCMRYLLTNKFRFPEDSILMLTD

Q7XJE5 Metacaspase-21.9e-2743.75Show/hide
Query:  MLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVM-DPR----------------------------------SVHAPS----------------PAPSPYN
        +LV+CS CRTPL LPPGA  IRCAIC A T +  +PR                                  + HAPS                PA SP+N
Subjt:  MLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVM-DPR----------------------------------SVHAPS----------------PAPSPYN

Query:  HAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTD
        HAPPG P   HG+KRAVIVG+SY+ ++ ELKGC+NDA CM+++L  +F+FPE  ILMLT+
Subjt:  HAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTD

Q7XJE6 Metacaspase-16.2e-4272.17Show/hide
Query:  PPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAP----SPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLT
        PPMLVNCSGCRTPLQLP GA SIRCA+C+AVT + DPR+   P    +P+P P  HAPPG   HPHGRKRAVI GISYR+SRHELKGC+NDAKCMR+LL 
Subjt:  PPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAP----SPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLT

Query:  NKFRFPEDSILMLTD
        NKF+F  DSILMLT+
Subjt:  NKFRFPEDSILMLTD

Q9FMG1 Metacaspase-34.5e-0833.33Show/hide
Query:  CRTPLQLPPGAPSIRCAICKAVTQVMD--------PRSVHAPSP---APSPYNH---------APPGAPAH----PHGRKRAVIVGISYRYSRHELKGCL
        C   + + P A +++C+ C  VTQ+           R +H          P +H          PP         P G+KRAV+ G++Y+   + LKGC+
Subjt:  CRTPLQLPPGAPSIRCAICKAVTQVMD--------PRSVHAPSP---APSPYNH---------APPGAPAH----PHGRKRAVIVGISYRYSRHELKGCL

Query:  NDAKCMRYLLTNKFRFPEDSILMLTD
        +DAK MR LL  +  FP DSILMLT+
Subjt:  NDAKCMRYLLTNKFRFPEDSILMLTD

Arabidopsis top hitse value%identityAlignment
AT1G02170.1 metacaspase 14.4e-4372.17Show/hide
Query:  PPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAP----SPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLT
        PPMLVNCSGCRTPLQLP GA SIRCA+C+AVT + DPR+   P    +P+P P  HAPPG   HPHGRKRAVI GISYR+SRHELKGC+NDAKCMR+LL 
Subjt:  PPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAP----SPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLT

Query:  NKFRFPEDSILMLTD
        NKF+F  DSILMLT+
Subjt:  NKFRFPEDSILMLTD

AT4G25110.1 metacaspase 21.4e-2843.75Show/hide
Query:  MLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVM-DPR----------------------------------SVHAPS----------------PAPSPYN
        +LV+CS CRTPL LPPGA  IRCAIC A T +  +PR                                  + HAPS                PA SP+N
Subjt:  MLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVM-DPR----------------------------------SVHAPS----------------PAPSPYN

Query:  HAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTD
        HAPPG P   HG+KRAVIVG+SY+ ++ ELKGC+NDA CM+++L  +F+FPE  ILMLT+
Subjt:  HAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTD

AT4G25110.2 metacaspase 21.4e-2843.29Show/hide
Query:  MLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVM-DPR----------------------------------SVHAPS----------------PAPSPYN
        +LV+CS CRTPL LPPGA  IRCAIC A T +  +PR                                  + HAPS                PA SP+N
Subjt:  MLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVM-DPR----------------------------------SVHAPS----------------PAPSPYN

Query:  HAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTDRFLP
        HAPPG P   HG+KRAVIVG+SY+ ++ ELKGC+NDA CM+++L  +F+FPE  ILMLT+   P
Subjt:  HAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPEDSILMLTDRFLP

AT5G64240.1 metacaspase 33.2e-0933.33Show/hide
Query:  CRTPLQLPPGAPSIRCAICKAVTQVMD--------PRSVHAPSP---APSPYNH---------APPGAPAH----PHGRKRAVIVGISYRYSRHELKGCL
        C   + + P A +++C+ C  VTQ+           R +H          P +H          PP         P G+KRAV+ G++Y+   + LKGC+
Subjt:  CRTPLQLPPGAPSIRCAICKAVTQVMD--------PRSVHAPSP---APSPYNH---------APPGAPAH----PHGRKRAVIVGISYRYSRHELKGCL

Query:  NDAKCMRYLLTNKFRFPEDSILMLTD
        +DAK MR LL  +  FP DSILMLT+
Subjt:  NDAKCMRYLLTNKFRFPEDSILMLTD

AT5G64240.2 metacaspase 33.2e-0933.33Show/hide
Query:  CRTPLQLPPGAPSIRCAICKAVTQVMD--------PRSVHAPSP---APSPYNH---------APPGAPAH----PHGRKRAVIVGISYRYSRHELKGCL
        C   + + P A +++C+ C  VTQ+           R +H          P +H          PP         P G+KRAV+ G++Y+   + LKGC+
Subjt:  CRTPLQLPPGAPSIRCAICKAVTQVMD--------PRSVHAPSP---APSPYNH---------APPGAPAH----PHGRKRAVIVGISYRYSRHELKGCL

Query:  NDAKCMRYLLTNKFRFPEDSILMLTD
        +DAK MR LL  +  FP DSILMLT+
Subjt:  NDAKCMRYLLTNKFRFPEDSILMLTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTATTCTCACGCGCCGCCGCCGATGCTGGTGAACTGCTCCGGCTGCCGGACTCCTCTCCAGCTGCCGCCGGGTGCTCCGTCGATTCGGTGCGCCATATGCAAGGC
GGTGACGCAGGTCATGGACCCGCGGTCCGTCCATGCGCCGTCGCCGGCTCCGTCGCCGTACAACCACGCGCCGCCGGGAGCCCCCGCTCATCCTCACGGCCGTAAAAGGG
CTGTGATTGTTGGGATATCTTACAGGTACTCGAGACATGAGCTCAAGGGCTGCCTCAACGATGCTAAGTGTATGCGTTATCTCTTGACCAATAAATTCCGTTTTCCAGAA
GATTCTATCCTCATGCTTACAGATAGATTCTTACCATATTTTGTAAGTCTTCTAAAAAAAAGAATGTGCACTAATAAGATAGGTAATAGGTTGAAATATAGAAACATACA
TTTTTTTAAACATATTTGTGGACCTATGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTATTCTCACGCGCCGCCGCCGATGCTGGTGAACTGCTCCGGCTGCCGGACTCCTCTCCAGCTGCCGCCGGGTGCTCCGTCGATTCGGTGCGCCATATGCAAGGC
GGTGACGCAGGTCATGGACCCGCGGTCCGTCCATGCGCCGTCGCCGGCTCCGTCGCCGTACAACCACGCGCCGCCGGGAGCCCCCGCTCATCCTCACGGCCGTAAAAGGG
CTGTGATTGTTGGGATATCTTACAGGTACTCGAGACATGAGCTCAAGGGCTGCCTCAACGATGCTAAGTGTATGCGTTATCTCTTGACCAATAAATTCCGTTTTCCAGAA
GATTCTATCCTCATGCTTACAGATAGATTCTTACCATATTTTGTAAGTCTTCTAAAAAAAAGAATGTGCACTAATAAGATAGGTAATAGGTTGAAATATAGAAACATACA
TTTTTTTAAACATATTTGTGGACCTATGGATTGA
Protein sequenceShow/hide protein sequence
MFYSHAPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRSVHAPSPAPSPYNHAPPGAPAHPHGRKRAVIVGISYRYSRHELKGCLNDAKCMRYLLTNKFRFPE
DSILMLTDRFLPYFVSLLKKRMCTNKIGNRLKYRNIHFFKHICGPMD