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Sed0000016 (gene) of Chayote v1 genome

Gene IDSed0000016
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:2361233..2361943
RNA-Seq ExpressionSed0000016
SyntenySed0000016
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595108.1 hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2866.67Show/hide
Query:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSG----EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEE-CGSIRRPKKRRFRSLESI
        +SEEV DAAQQL+QLSN+D  SSNVV   N K  K ++ K  G G    EEEVDQKRCQIE SI  KIEEIFGKDD+++EE CGSI RP KRRFRS++SI
Subjt:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSG----EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEE-CGSIRRPKKRRFRSLESI

Query:  YMKTKPIANGRFSG
        YM TKP+ N RFSG
Subjt:  YMKTKPIANGRFSG

KAG6604263.1 hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2359.56Show/hide
Query:  EDDSEEVFDAAQQLMQLS-----NDDAGSSNVVATGNDKNDKNVRIKVHGSG------EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKR
        ED SEEV  AAQ LMQLS     +DD  SSNVV     K +K ++ K HG        EEEVDQKR QIE SIWLKIEEIFGKDD EEE+  SI RPKKR
Subjt:  EDDSEEVFDAAQQLMQLS-----NDDAGSSNVVATGNDKNDKNVRIKVHGSG------EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKR

Query:  RFRSLESIYMKTKPIANGRF---------SGNRGGG
        RFRSL+SIY+ TKPI NGRF          G  GGG
Subjt:  RFRSLESIYMKTKPIANGRF---------SGNRGGG

KAG7034419.1 hypothetical protein SDJN02_04148, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-2358.82Show/hide
Query:  EDDSEEVFDAAQQLMQLS-----NDDAGSSNVVATGNDKNDKNVRIKVHGSG------EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKR
        ED SEEV  AAQ LMQLS     +DD   SNVV    +K +K ++ K HG        EEEVDQKR QIE SIWLKIEEIFGKDD EEE+  SI RPKKR
Subjt:  EDDSEEVFDAAQQLMQLS-----NDDAGSSNVVATGNDKNDKNVRIKVHGSG------EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKR

Query:  RFRSLESIYMKTKPIANGRF---------SGNRGGG
        RFRSL+SIY+ TKPI NGRF          G  GGG
Subjt:  RFRSLESIYMKTKPIANGRF---------SGNRGGG

XP_022133223.1 uncharacterized protein LOC111005872 [Momordica charantia]4.8e-2665.04Show/hide
Query:  MEDDS------EEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDDEE-EEECGSIRRPKKR--R
        ME++S      EEV  AAQQLMQLSN+D  SSNVV     KN+K  +      GEEEVDQKRCQIEASIW KIEEIFGK++EE EE+  SI RPKKR  R
Subjt:  MEDDS------EEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDDEE-EEECGSIRRPKKR--R

Query:  FRSLESIYMKTKPIANGRFSGNR
        FRS++SIYM TKPI N RFSGNR
Subjt:  FRSLESIYMKTKPIANGRFSGNR

XP_031742655.1 uncharacterized protein LOC116404425 [Cucumis sativus]7.7e-2461.86Show/hide
Query:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSG-----EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEEC---GSI--RRPKKRRFR
        +SEEV  AAQQLMQLSNDD  S+  V     K +K       G G     EEEVDQKRCQIE+S+WLKIEEIFGKD+E +  C    SI   RPKKRRFR
Subjt:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSG-----EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEEC---GSI--RRPKKRRFR

Query:  SLESIYMKTKPIANGRFS
        S++SIYMKTKPI NGRFS
Subjt:  SLESIYMKTKPIANGRFS

TrEMBL top hitse value%identityAlignment
A0A0A0KFU1 Uncharacterized protein1.9e-1557.28Show/hide
Query:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSG-----EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEEC---GSI--RRPKKRRFR
        +SEEV  AAQQLMQLSNDD  S+  V     K +K       G G     EEEVDQKRCQIE+S+WLKIEEIFGKD+E +  C    SI   RPKKRRFR
Subjt:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSG-----EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEEC---GSI--RRPKKRRFR

Query:  SLE
        S++
Subjt:  SLE

A0A5A7SLI9 Uncharacterized protein1.3e-2162.83Show/hide
Query:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDD----EEEEECGSIRRPKKRRFRSLESIY
        +SEEV  AAQQLMQLSNDD  SSNV      K +K       G  EEEVDQKRCQIE+SIWLKIEEIFGKD+    +         RPKKRRFRS++SIY
Subjt:  DSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDD----EEEEECGSIRRPKKRRFRSLESIY

Query:  MKTKP-IANGRFS
        MKTKP I NGRFS
Subjt:  MKTKP-IANGRFS

A0A6J1BYI0 uncharacterized protein LOC1110058722.3e-2665.04Show/hide
Query:  MEDDS------EEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDDEE-EEECGSIRRPKKR--R
        ME++S      EEV  AAQQLMQLSN+D  SSNVV     KN+K  +      GEEEVDQKRCQIEASIW KIEEIFGK++EE EE+  SI RPKKR  R
Subjt:  MEDDS------EEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDDEE-EEECGSIRRPKKR--R

Query:  FRSLESIYMKTKPIANGRFSGNR
        FRS++SIYM TKPI N RFSGNR
Subjt:  FRSLESIYMKTKPIANGRFSGNR

A0A6J1GFL5 uncharacterized protein LOC1114537263.5e-2258.09Show/hide
Query:  EDDSEEVFDAAQQLMQLS-----NDDAGSSNVVATGNDKNDKNVRIKVHGSG------EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKR
        ED SEEV  AAQ LMQLS     +DD  SSNVV       +K ++ K HG        EEEVDQKR QIE SIWLKIEEIFGKDD EE++  SI RPKKR
Subjt:  EDDSEEVFDAAQQLMQLS-----NDDAGSSNVVATGNDKNDKNVRIKVHGSG------EEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKR

Query:  RFRSLESIYMKTKPIANGRF---------SGNRGGG
        RFRSL+SIY+ TKPI NGRF          G  GGG
Subjt:  RFRSLESIYMKTKPIANGRF---------SGNRGGG

A0A6J5V3C5 Uncharacterized protein5.8e-0942.73Show/hide
Query:  SEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKRRFRSLESIYMKTKP
        +E    AAQQLMQLS++D  ++N  ++ + +++KN + +      EEVDQ R  I   IW KIEEIFGK+++       + RPKKRR+RSL SIY+ +KP
Subjt:  SEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKRRFRSLESIYMKTKP

Query:  IANGRFSGNR
        +  G   G +
Subjt:  IANGRFSGNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09876.1 unknown protein8.5e-0544Show/hide
Query:  IEEIFGKDD-EEEEEC----------GSIRRPKKRRFRSLESIYMKTKPI
        IEEIFGKDD  ++++C           S+++ KK+++R++ESIYM T+PI
Subjt:  IEEIFGKDD-EEEEEC----------GSIRRPKKRRFRSLESIYMKTKPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGATTCGGAGGAGGTATTCGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGATGCCGGTAGCAGCAATGTCGTCGCGACCGGGAACGACAAGAACGA
TAAGAACGTGAGGATTAAGGTTCACGGTAGCGGAGAGGAGGAGGTTGATCAGAAGCGATGCCAAATCGAGGCGTCGATCTGGTTGAAGATCGAAGAGATTTTCGGGAAAG
ATGACGAAGAAGAAGAAGAATGCGGTTCGATACGTCGTCCTAAGAAGAGACGATTTCGATCCCTTGAAAGTATATATATGAAGACTAAGCCTATTGCCAATGGTAGATTC
TCCGGCAACCGCGGTGGCGGTCTCGGGGTTTTAACGGGTTTGTGGAATTAA
mRNA sequenceShow/hide mRNA sequence
AGACACCATTTTGATCACTACACTTCATTCTCTCTCTTGTTTCTCTCTCTAAATTTTTTTTTTTTTTTGGGTTCTTCCATGGAAGATGATTCGGAGGAGGTATTCGATGC
GGCGCAGCAGTTGATGCAGCTGAGCAACGACGATGCCGGTAGCAGCAATGTCGTCGCGACCGGGAACGACAAGAACGATAAGAACGTGAGGATTAAGGTTCACGGTAGCG
GAGAGGAGGAGGTTGATCAGAAGCGATGCCAAATCGAGGCGTCGATCTGGTTGAAGATCGAAGAGATTTTCGGGAAAGATGACGAAGAAGAAGAAGAATGCGGTTCGATA
CGTCGTCCTAAGAAGAGACGATTTCGATCCCTTGAAAGTATATATATGAAGACTAAGCCTATTGCCAATGGTAGATTCTCCGGCAACCGCGGTGGCGGTCTCGGGGTTTT
AACGGGTTTGTGGAATTAACTTAGAATCAACTTGATCCAACATGAGCATAATTCAATAGATATGAAGGTTTAATGTTTTAATAACTTCTTGAATTATGTTTATGTTGGTT
TGAAAATGTTAGGAAATTGAATGTTTTTGCCTTTGTGTTTAATTTTGGATATGAAGTTTGATAATTGATGGTAGGTAGAAGTTAATTATATGTACATTTGCCATTGGAAG
TAGAAATTAAGAGATACAAAAGGTTGAATGAAGAAAATAATATAATCCCAT
Protein sequenceShow/hide protein sequence
MEDDSEEVFDAAQQLMQLSNDDAGSSNVVATGNDKNDKNVRIKVHGSGEEEVDQKRCQIEASIWLKIEEIFGKDDEEEEECGSIRRPKKRRFRSLESIYMKTKPIANGRF
SGNRGGGLGVLTGLWN