CuGenDBv2

Gene ID	Sed0000042
Organism	Sechium edule (Chayote v1)
Description	maternal effect embryo arrest 9
Genome location	LG13:3593062..3593883
RNA-Seq Expression	Sed0000042
Synteny	Sed0000042
Gene Ontology terms	GO:0009555 - pollen development (biological process) GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0009506 - plasmodesma (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600354.1 hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sororia]

7.3e-58

85.03

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSD+AL DK+FDP+TIEDL+KLFEIEAY SWAA+EL H  E RDAEIAMQ+AED+LDS MEDAMDEFR+FEEEFDR+AEAEL+DLVDKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

XP_004149957.1 uncharacterized protein LOC101218253 [Cucumis sativus]

3.3e-58

85.71

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSDQAL DK+FDP+TIEDL+KLFEIEAYKSWAA+EL H  E +DAEIAMQ+AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL+ L+DKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

XP_022942791.1 uncharacterized protein LOC111447720 [Cucurbita moschata]

1.1e-58

85.71

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSD+AL DK+FDP+TIEDL+KLFEIEAY SWAA+EL H  E RDAEIAMQ+AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL+DL+DKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

XP_023533822.1 uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo]

2.3e-59

87.07

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSD+AL DK+FDP+TIEDL+KLFEIEAY SWAAMEL H  E RDAEIAMQ+AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL+DLVDKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG+LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

XP_038885707.1 uncharacterized protein LOC120075975 [Benincasa hispida]

3.3e-58

85.71

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSDQAL DK+FDP+TIEDL+KLFEIEAYKSWAAMEL H  E +DAEIAM +AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL++L+DKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAB6 Uncharacterized protein

1.6e-58

85.71

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSDQAL DK+FDP+TIEDL+KLFEIEAYKSWAA+EL H  E +DAEIAMQ+AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL+ L+DKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

A0A5D3BKS0 Uncharacterized protein

7.8e-58

84.35

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALISHFTFLSDQ L DK+FDP+TIEDL+KLFEIE YKSWAA+EL H  E +DAEIAMQ+AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL+ L+DKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME A  VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

A0A6J1E4Z9 uncharacterized protein LOC111430656

1.7e-57

85.71

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSDQAL DK+FDP+TIEDL+KLFEIEAYKSWAA EL    EA++AEIAMQ+AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL++LVDKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

A0A6J1FR93 uncharacterized protein LOC111447720

5.4e-59

85.71

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSD+AL DK+FDP+TIEDL+KLFEIEAY SWAA+EL H  E RDAEIAMQ+AEDYLDS MEDAMDEFRRFEEEFDR+AEAEL+DL+DKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

A0A6J1IXX5 uncharacterized protein LOC111481629 isoform X1

1.0e-57

84.35

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Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALIS FTFLSD+AL DK+FDP+TIEDL+KLFEIEAY SWAA+EL H  E RDAEIAM +AEDYLDS MEDA+DEFRRFEEEFDR+AE EL+DLVDKSE
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
        KARKMG LME AA VASKRYMEAAMNSATASMRSAWKAISS+KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G60870.1 maternal effect embryo arrest 9

5.2e-38

57.82

Show/hide

Query:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE
        MEALI HFT LSDQAL DK FDP+ IEDL++LFE+++YK+WAA+E     E  +AE +++EAE  LD  ME  M+E+RR  EE +R+  AEL++L +K+E
Subjt:  MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSE

Query:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS
         AR+ G LME AA VA+KR++ AAM SA ASMRSAWK  + +KVHPS
Subjt:  KARKMGKLMETAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

Sequences

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CDS sequence

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ATGGAAGCTCTCATCTCCCATTTCACCTTCCTCTCCGATCAAGCCCTAACCGACAAGCATTTCGACCCCGCCACCATCGAAGATCTCCTCAAGCTCTTCGAGATCGAAGC
CTACAAGTCCTGGGCCGCCATGGAGCTCCACCACGACACCGAGGCTCGCGACGCCGAGATCGCCATGCAGGAAGCCGAGGATTACCTCGATTCCGCCATGGAAGACGCCA
TGGATGAGTTCAGGAGGTTCGAGGAGGAGTTCGATCGCATCGCCGAGGCCGAGCTTCGAGACCTCGTCGATAAGTCCGAGAAGGCTCGCAAGATGGGGAAATTGATGGAG
ACCGCCGCCAAGGTTGCTTCCAAGAGGTATATGGAGGCGGCGATGAACTCCGCTACTGCTTCCATGAGATCCGCCTGGAAGGCTATTTCGTCTAGTAAGGTTCATCCTTC
TTGA

mRNA sequence

Show/hide mRNA sequence

CTTCCCATCACTTTGCTACCACTGTTAGGGAAACCATCATCTTCATCTTCATCACCATTTCTCCCTTTTTCTGATTCTCCATTCCCATCCACAGATCTCAAAACCCTAAT
CCCATCCATGGAAGCTCTCATCTCCCATTTCACCTTCCTCTCCGATCAAGCCCTAACCGACAAGCATTTCGACCCCGCCACCATCGAAGATCTCCTCAAGCTCTTCGAGA
TCGAAGCCTACAAGTCCTGGGCCGCCATGGAGCTCCACCACGACACCGAGGCTCGCGACGCCGAGATCGCCATGCAGGAAGCCGAGGATTACCTCGATTCCGCCATGGAA
GACGCCATGGATGAGTTCAGGAGGTTCGAGGAGGAGTTCGATCGCATCGCCGAGGCCGAGCTTCGAGACCTCGTCGATAAGTCCGAGAAGGCTCGCAAGATGGGGAAATT
GATGGAGACCGCCGCCAAGGTTGCTTCCAAGAGGTATATGGAGGCGGCGATGAACTCCGCTACTGCTTCCATGAGATCCGCCTGGAAGGCTATTTCGTCTAGTAAGGTTC
ATCCTTCTTGAAATTACCGATTTATTTATGTGTTTTTCTTTGGTGATTGTTTATTGCTTTTTGTTTGTTGAAGAATTGAAATCTGTTTATGTTTTTGATGTTGGTTTTCT
GGGAATTTGGATCAAACCCTAATTTCAGAAGCCTTGTATTTGTACTCTTTGCTGTAAAATTAATGCATAAATAAATAACTATATGTTCAATCTTCAATTATTGATTCTGT
TATGCTAGATACAAATTATTGAATTGTATTAAACTCCTGGATTTAATAATAT

Protein sequence

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MEALISHFTFLSDQALTDKHFDPATIEDLLKLFEIEAYKSWAAMELHHDTEARDAEIAMQEAEDYLDSAMEDAMDEFRRFEEEFDRIAEAELRDLVDKSEKARKMGKLME
TAAKVASKRYMEAAMNSATASMRSAWKAISSSKVHPS

Sed0000042 (gene) of Chayote v1 genome