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Sed0000043 (gene) of Chayote v1 genome

Gene IDSed0000043
OrganismSechium edule (Chayote v1)
DescriptionPlant protein 1589 of unknown function
Genome locationLG03:46654896..46656340
RNA-Seq ExpressionSed0000043
SyntenySed0000043
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595297.1 hypothetical protein SDJN03_11850, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2972.92Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTP
        M+DDPSASYIH+VHH+IE  ++FNMSKEECME+LSKHANI  VITSTVWNEL KENKEFFEAY+KKRR+V+T   E    SDTS  NL G G+TTP
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTP

XP_022977252.1 uncharacterized protein LOC111477620 [Cucurbita maxima]3.7e-2972.63Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT
        M+DDPSASYIH+VHH+IE+C++FNM+KEECME+LSKHANI  VITSTVWNEL KENKEFFEAY KKRR+V+T A++    SDTS+ NL  SG+TT
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT

XP_023518507.1 uncharacterized protein LOC111781985 [Cucurbita pepo subsp. pepo]4.4e-3072.92Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTP
        M+DDPSASYIH+VHH+IE C++FNMSKEECME+LSKHANI  VITSTVW+EL KENKEFFEAY+KKRR+V+T   E    SDTS  NL G G+TTP
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTP

XP_023544368.1 uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo]3.7e-2973.68Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT
        M+DDPSASYIH+VHH+IE+C+IFNM+KEECME+LSKHANI  VITSTVWNEL KENKEFFEAY KKRR+V+T A++    SDTS+ NL  SG TT
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT

XP_038883060.1 uncharacterized protein LOC120074114 [Benincasa hispida]1.5e-3074Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTPSLRR
        MDDDPSASYIH+VHH+IE+C+IFNM+KEECME+LSKHANI  VITSTVWNEL KENKEFFEAY KKRR+V+   SE    SDTS+ NL GS +TT SL R
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTPSLRR

TrEMBL top hitse value%identityAlignment
A0A0A0KZG8 Uncharacterized protein6.8e-2970.41Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTPSL
        MDDDPSASYIH+VHH+IE+C+IFNM+KEEC+E+LSKHANI  VITSTVWNEL KENKEFFEAY KKRR+V+T        S+T++ NL GS +TT SL
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTPSL

A0A6J1HDK1 uncharacterized protein LOC1114631851.8e-2971.88Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTP
        M+DDPSASYIH+VHH+IE  ++FNMSKEECME+LSKHANI  V+TSTVWNEL KENKEFFEAY+KKRR+V+T   E    SDTS  NL G G+TTP
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTP

A0A6J1IAZ7 uncharacterized protein LOC1114712583.1e-2971.58Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT
        M+DDPSASYIH+VHH+IE C++FNMSKEECME+LSKHANI  VITSTVWNEL KENKEFF+AY+KKRR+V+T   E    SDT   NL G G+TT
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT

A0A6J1IHY2 uncharacterized protein LOC1114776201.8e-2972.63Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT
        M+DDPSASYIH+VHH+IE+C++FNM+KEECME+LSKHANI  VITSTVWNEL KENKEFFEAY KKRR+V+T A++    SDTS+ NL  SG+TT
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETT

A0A7J9JVZ5 Uncharacterized protein5.0e-2465.56Show/hide
Query:  DDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSG
        DD SASYIH+VHH+IEECLIFNMSKEECME+LSKHA+I  VITSTVWNEL KENKEFFEAY + R   +TD  + + +    N+N++  G
Subjt:  DDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.2 Plant protein 1589 of unknown function3.3e-1250Show/hide
Query:  SYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAY
        SYI +V HMIE C++  M+++EC+++L  HA+I  ++T TVW  L +ENK+FFE Y
Subjt:  SYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAY

AT3G28990.1 Plant protein 1589 of unknown function1.8e-2167.61Show/hide
Query:  ASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEE
        A YIHLV HMIE CL FNMSKEECME+LS++ANIN +ITSTVW ELVKENK+FFE Y++K     + + EE
Subjt:  ASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEE

AT3G55240.1 Plant protein 1589 of unknown function4.2e-2359.14Show/hide
Query:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEE------KPLSDTSNSN
        M D  SASYIH+V HMIE+CLIF+MSKEEC+E+LSKHANI  VITSTVW EL KENKEFF+AY++++      + EE      K +SD+S  +
Subjt:  MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEE------KPLSDTSNSN

AT5G02580.1 Plant protein 1589 of unknown function2.2e-2463.16Show/hide
Query:  ASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSD
        ASYIHLVHH+IEEC++FNM KEECM++L KHANI  +ITSTVW EL KENKEFFEAY+++R  + T+    + + D
Subjt:  ASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSD

AT5G02580.2 Plant protein 1589 of unknown function1.4e-1375.61Show/hide
Query:  ASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITST
        ASYIHLVHH+IEEC++FNM KEECM++L KHANI  +ITST
Subjt:  ASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATGACCCCTCGGCTTCATACATCCACCTGGTTCACCACATGATTGAAGAGTGCTTAATTTTCAACATGTCCAAAGAAGAATGCATGGAATCTCTCTCCAAACA
TGCAAATATCAACACGGTCATCACCTCCACCGTGTGGAACGAACTAGTAAAGGAGAACAAGGAATTCTTTGAAGCGTATGATAAGAAACGACGTAACGTTTCTACTGACG
CGTCGGAGGAGAAACCGTTGTCCGACACGTCGAATTCCAACTTGCAAGGTTCGGGGGAAACGACACCGTCTTTGCGTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTCTCTCCAATTTTCCCTTCACTTTCTTTCCATCCAAACAGCCCACCATGGACGATGACCCCTCGGCTTCATACATCCACCTGGTTCACCACATGATTGAAGAGTGC
TTAATTTTCAACATGTCCAAAGAAGAATGCATGGAATCTCTCTCCAAACATGCAAATATCAACACGGTCATCACCTCCACCGTGTGGAACGAACTAGTAAAGGAGAACAA
GGAATTCTTTGAAGCGTATGATAAGAAACGACGTAACGTTTCTACTGACGCGTCGGAGGAGAAACCGTTGTCCGACACGTCGAATTCCAACTTGCAAGGTTCGGGGGAAA
CGACACCGTCTTTGCGTCGGTAGGTAACCGACGGCGGTGCTACGGTGTACGACATCGTTTTGATGGATCCTAGGCAGCCACGAGTGGCAGCGTCAAGATAGTTTAAGATA
CTTTTGACTTGGCTAACTGAAACGTGGGGACTCGTGGCTACACGTGGAGGCTCGTGGCATCGTTCAGCAACTTTATGTTTTTAACGTATTGCTGTTGCTTTATAATTTGG
CTGCTCCATTATTTCAAAAAGTCAAATAAATATATAAATAAAATAGGGTTTTTTTTTATGGTAA
Protein sequenceShow/hide protein sequence
MDDDPSASYIHLVHHMIEECLIFNMSKEECMESLSKHANINTVITSTVWNELVKENKEFFEAYDKKRRNVSTDASEEKPLSDTSNSNLQGSGETTPSLRR