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Sed0000053 (gene) of Chayote v1 genome

Gene IDSed0000053
OrganismSechium edule (Chayote v1)
Descriptioncopper transport protein ATX1-like
Genome locationLG06:43981402..43984093
RNA-Seq ExpressionSed0000053
SyntenySed0000053
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573880.1 Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2963.64Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVP-AAPAPEAVPAAPALEAVSEAPVSEAVLA
        + TTVLKVAMSCQGC GAVRRVL KLEGVETFDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE P AAPAP A  AA           + A  A
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVP-AAPAPEAVPAAPALEAVSEAPVSEAVLA

Query:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
        AP      AAP  EAAPA            P  EA PAA  PAEAEAKPAET A
Subjt:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

XP_022945074.1 copper transport protein ATX1-like [Cucurbita moschata]8.5e-3064.94Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPA-APAPEAVPAAPALEAVSEAPVSEAVLA
        + TTVLKVAMSCQGC GAVRRVL KLEGVETFDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE PA APAP A  AA           + A  A
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPA-APAPEAVPAAPALEAVSEAPVSEAVLA

Query:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
        AP      A+P  EAAPAA APA E   A        AAA PAEAEAKPAET A
Subjt:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

XP_022968569.1 copper transport protein ATX1-like isoform X1 [Cucurbita maxima]1.6e-3162.09Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA
        + TTVLKVAMSCQGC GAVRRVL KLEGV+ FDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE PAA A  A PA  A  A + APV       
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA

Query:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
                        AAPA       A P PEA PAAAPPAEAEAKPAE+VA
Subjt:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

XP_022968570.1 copper transport protein ATX1-like isoform X2 [Cucurbita maxima]1.2e-2857.14Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVP-AAPAPEAVPAAPALEAVSEAPVSEAVLA
        + TTVLKVAMSCQGC GAVRRVL KLEGV+ FDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE P AAPAP A PA                  
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVP-AAPAPEAVPAAPALEAVSEAPVSEAVLA

Query:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
                                    A P PEA PAAAPPAEAEAKPAE+VA
Subjt:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

XP_023541206.1 copper transport protein ATX1-like [Cucurbita pepo subsp. pepo]3.5e-3164.94Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA
        + TTVLKVAMSCQGC GAVRRVL KLEGVETFDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE PAA AP  V AA A  A + AP        
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA

Query:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVP-AAAPPAEAEAKPAETVA
               AAP   AAPA          A P PEA P AAAPPAEAEAKPAE+VA
Subjt:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVP-AAAPPAEAEAKPAETVA

TrEMBL top hitse value%identityAlignment
A0A5A7SZ31 Copper transport protein ATX1-like2.0e-2469.79Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEA
        + TTVLKVAMSCQGC GAV+RVL KLEGV+TFDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWED+  AAPA  A PA    EA    P++ A
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEA

A0A6J1FZY8 copper transport protein ATX1-like4.1e-3064.94Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPA-APAPEAVPAAPALEAVSEAPVSEAVLA
        + TTVLKVAMSCQGC GAVRRVL KLEGVETFDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE PA APAP A  AA           + A  A
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPA-APAPEAVPAAPALEAVSEAPVSEAVLA

Query:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
        AP      A+P  EAAPAA APA E   A        AAA PAEAEAKPAET A
Subjt:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

A0A6J1HTV3 copper transport protein ATX1-like isoform X31.7e-2856.86Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA
        + TTVLKVAMSCQGC GAVRRVL KLEGV+ FDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE P APAP A PA                   
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA

Query:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
                                   A P PEA PAAAPPAEAEAKPAE+VA
Subjt:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

A0A6J1HXJ6 copper transport protein ATX1-like isoform X25.9e-2957.14Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVP-AAPAPEAVPAAPALEAVSEAPVSEAVLA
        + TTVLKVAMSCQGC GAVRRVL KLEGV+ FDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE P AAPAP A PA                  
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVP-AAPAPEAVPAAPALEAVSEAPVSEAVLA

Query:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
                                    A P PEA PAAAPPAEAEAKPAE+VA
Subjt:  APVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

A0A6J1I011 copper transport protein ATX1-like isoform X17.5e-3262.09Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA
        + TTVLKVAMSCQGC GAVRRVL KLEGV+ FDID+ A+KVTV GNV+RDVVFQTVSK+GKKTAYWEDE PAA A  A PA  A  A + APV       
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPVSEAVLAA

Query:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA
                        AAPA       A P PEA PAAAPPAEAEAKPAE+VA
Subjt:  PVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 456.0e-1047.69Show/hide
Query:  STTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW
        S   L V M C+GC   VRR + KL+GV+T +IDV  +KVTV G VDR+ V + V ++G+   YW
Subjt:  STTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW

F4JZL7 Heavy metal-associated isoprenylated plant protein 336.6e-0945.21Show/hide
Query:  SFEDERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW
        S E+     T VLKV + C GC   V+++L+K+EGV T  ID    KVTV GNVD  V+ + + KSGK    W
Subjt:  SFEDERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW

O82089 Copper transport protein CCH1.3e-1751.26Show/hide
Query:  TTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPV-SEAVLAAP
        T VLKV MSCQGC GAV RVL K+EGVE+FDID+  +KVTV GNV+ + VFQTVSK+GKKT+YW  E  A P  E   A P +E V+E    +E    A 
Subjt:  TTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPV-SEAVLAAP

Query:  VSEAVLAAPVSEAAPAAPA
        V       P +  A   P+
Subjt:  VSEAVLAAPVSEAAPAAPA

Q84J88 Heavy metal-associated isoprenylated plant protein 361.7e-0935.8Show/hide
Query:  KKRRKSFED---ERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW
        +++R  FED       +T VL+V++ C+GC   ++++L K++GV T +IDV  +KVTV+GNV+ +++ + + K+G+    W
Subjt:  KKRRKSFED---ERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW

Q94BT9 Copper transport protein ATX17.0e-1961.33Show/hide
Query:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPA
        + T VL+VAM+C+GC GAV+RVL K+EGVE+FD+D+  +KVTV GNV  D V QTV+K+GKKTA+WE E   A A
Subjt:  TSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPA

Arabidopsis top hitse value%identityAlignment
AT1G66240.1 homolog of anti-oxidant 11.3e-2058.75Show/hide
Query:  EDERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPA
        E +  + T VL+VAM+C+GC GAV+RVL K+EGVE+FD+D+  +KVTV GNV  D V QTV+K+GKKTA+WE E   A A
Subjt:  EDERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPA

AT1G66240.2 homolog of anti-oxidant 11.8e-1762.12Show/hide
Query:  MSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPA
        M+C+GC GAV+RVL K+EGVE+FD+D+  +KVTV GNV  D V QTV+K+GKKTA+WE E   A A
Subjt:  MSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPA

AT3G56240.1 copper chaperone9.4e-1951.26Show/hide
Query:  TTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPV-SEAVLAAP
        T VLKV MSCQGC GAV RVL K+EGVE+FDID+  +KVTV GNV+ + VFQTVSK+GKKT+YW  E  A P  E   A P +E V+E    +E    A 
Subjt:  TTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEVPAAPAPEAVPAAPALEAVSEAPV-SEAVLAAP

Query:  VSEAVLAAPVSEAAPAAPA
        V       P +  A   P+
Subjt:  VSEAVLAAPVSEAAPAAPA

AT3G56891.1 Heavy metal transport/detoxification superfamily protein4.2e-1147.69Show/hide
Query:  STTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW
        S   L V M C+GC   VRR + KL+GV+T +IDV  +KVTV G VDR+ V + V ++G+   YW
Subjt:  STTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW

AT5G27690.1 Heavy metal transport/detoxification superfamily protein1.2e-1035.8Show/hide
Query:  KKRRKSFED---ERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW
        +++R  FED       +T VL+V++ C+GC   ++++L K++GV T +IDV  +KVTV+GNV+ +++ + + K+G+    W
Subjt:  KKRRKSFED---ERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGCCGATTTCAATTGAATTAGTTGTATTTGTTTTGAAATTTATTCAATCCATGGCTTGTGGGATGTTTTTGTGCGCTAAGAAAAGACGTAAAAGCTTCGAAGA
TGAAAGAACTACTAGCACCACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGCTGGAGCCGTCAGAAGGGTCTTGGAAAAACTTGAAGGAGTCGAAACATTTGACA
TCGACGTAGGTGCTAAAAAGGTAACTGTGGTAGGCAATGTGGATCGCGACGTAGTTTTCCAAACTGTTTCAAAAAGTGGAAAGAAAACAGCCTACTGGGAAGATGAAGTC
CCCGCAGCACCTGCACCAGAGGCTGTCCCAGCTGCACCCGCATTGGAGGCCGTCTCAGAAGCACCCGTGTCGGAGGCTGTCTTAGCAGCACCCGTGTCGGAGGCTGTCTT
AGCAGCACCAGTGTCGGAGGCTGCTCCAGCAGCACCTGCACCTGCATTGGAGACCGGCCGAGCAGTGCCTGAACCGGAGGCCGTCCCAGCAGCAGCACCACCAGCTGAAG
CAGAAGCTAAGCCTGCCGAGACTGTGGCTGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTCGATTATTCGTTCTTCTATGCAATCGCTGGAGATTCGTATTCGATTTTTTCATCTTTATCTGTTGTTTTCTTCTTTCTATTGTTCTGGAGATTGAAGATTCGTTAGTT
CGTTCATTTCAAGCTTTAAATCTGCAGCTCGGATCATGAAATCGCCGATTTCAATTGAATTAGTTGTATTTGTTTTGAAATTTATTCAATCCATGGCTTGTGGGATGTTT
TTGTGCGCTAAGAAAAGACGTAAAAGCTTCGAAGATGAAAGAACTACTAGCACCACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGCTGGAGCCGTCAGAAGGGT
CTTGGAAAAACTTGAAGGAGTCGAAACATTTGACATCGACGTAGGTGCTAAAAAGGTAACTGTGGTAGGCAATGTGGATCGCGACGTAGTTTTCCAAACTGTTTCAAAAA
GTGGAAAGAAAACAGCCTACTGGGAAGATGAAGTCCCCGCAGCACCTGCACCAGAGGCTGTCCCAGCTGCACCCGCATTGGAGGCCGTCTCAGAAGCACCCGTGTCGGAG
GCTGTCTTAGCAGCACCCGTGTCGGAGGCTGTCTTAGCAGCACCAGTGTCGGAGGCTGCTCCAGCAGCACCTGCACCTGCATTGGAGACCGGCCGAGCAGTGCCTGAACC
GGAGGCCGTCCCAGCAGCAGCACCACCAGCTGAAGCAGAAGCTAAGCCTGCCGAGACTGTGGCTGTTGCTTAAAATTTTACTCATATTTACTTCATTGAAGTTTTCTGTT
CAATGCAAAAGGTCTTTGCTTCGTGAAGCTGTAATAATGTATCGGTAAAGTTTGTAATTTTTTAAATTTTGTGATATTAAATAGTGTCACATATATACTAAACAGGGTTT
ACCTCTCTATGGAAGCAGGTATTTCTCATGGAAGCAGGTATTTCTCATAATAATGTATTAGTAAAGTCTGTAATATTTTGATTGAAGTGGCTGTTGTATGATCTTATACA
TTAAAAGATATATTTCTGTTTTTGCCTCTA
Protein sequenceShow/hide protein sequence
MKSPISIELVVFVLKFIQSMACGMFLCAKKRRKSFEDERTTSTTVLKVAMSCQGCAGAVRRVLEKLEGVETFDIDVGAKKVTVVGNVDRDVVFQTVSKSGKKTAYWEDEV
PAAPAPEAVPAAPALEAVSEAPVSEAVLAAPVSEAVLAAPVSEAAPAAPAPALETGRAVPEPEAVPAAAPPAEAEAKPAETVAVA