; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000092 (gene) of Chayote v1 genome

Gene IDSed0000092
OrganismSechium edule (Chayote v1)
DescriptionF-box protein SKIP1-like
Genome locationLG03:46181700..46183822
RNA-Seq ExpressionSed0000092
SyntenySed0000092
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-15085.86Show/hide
Query:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS
        A P+WAELTQECLTN+FSRL+IE RWRGPMLVCK W RAATD SL S FDLEPRFDS  TESPAWW+P+FEA+IDSMLRS V W+L SL LIRIRHCSDS
Subjt:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS

Query:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA
        SL +VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIG HCPNIK LKRNFFNTLDPSQ  GIVPDSYLNACPQD D+EA
Subjt:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA

Query:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI
         AIAKF+PNLEHL+LCFSKLSAKAL+LIC GCPNLKYLDLFGCVNLTSRDIVNATSS ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTDIFRI
Subjt:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI

XP_022946543.1 F-box protein SKIP1-like [Cucurbita moschata]7.5e-15085.52Show/hide
Query:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS
        A P+WAELTQECLTN+FSRL+IE RWRGPMLVCK W RAATD SL S FDLEPRFDS  TESPAWW+P+FEA+IDSMLRS V W+L SL LIRIRHCSDS
Subjt:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS

Query:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA
        SL +VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIG HCPNIK LKRNFFNTLDPSQ  GIVPDSYLNACPQD D+EA
Subjt:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA

Query:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI
         AIAKF+PNLEHL+LCFSKLSAKAL+LIC GCPNLKYLDLFGCVNLTSRDIVNATS+ ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTDIFRI
Subjt:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI

XP_022999743.1 F-box protein SKIP1-like [Cucurbita maxima]1.8e-14884.85Show/hide
Query:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS
        A  +WAELTQECLTN+FSRL+IE RWRGPMLVCK W RAATD SL S FDL+PRFDS  TESPAWW+P+FE +IDSMLRS V W+L SL LIRIRHCSDS
Subjt:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS

Query:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA
        SL +VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIG HCPNIK LKRNFFNTLDPSQ  GIVPDSYLNACPQD D+EA
Subjt:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA

Query:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI
         AIAKF+PNLEHLELCFSK+SAKAL+LIC GCPNLKYLDLFGCVNLTSRDIVNATSS ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTDIFRI
Subjt:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI

XP_023545430.1 F-box protein SKIP1-like [Cucurbita pepo subsp. pepo]8.2e-14985.19Show/hide
Query:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS
        A P+WAELTQECLTN+FSRL+ E RWRGPMLVCK W RAATD SL S F+LEPRFDS  TESPAWW+P+FEA+IDSMLRS V W+L SL LIRIRHCSDS
Subjt:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS

Query:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA
        SL +VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIG HCPNIK LKRNFFNTLDPSQ  GIVPDSYL+ACPQD D+EA
Subjt:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA

Query:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI
         AIAKF+PNLEHLELCFSKLSAKAL+LIC GCPNLKYLDLFGCVNLTSRDIVNATSS ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTDIFRI
Subjt:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]2.2e-14984.82Show/hide
Query:  MAEP-SASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRI
        MAEP S S +WAELT ECLTN+ SRL+IE RWRGPMLVCK W RAATDPSL S FDLEPRF+S  TESPAWW+P FE +IDSMLRS VHW+L SL LIRI
Subjt:  MAEP-SASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRI

Query:  RHCSDSSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQ
        RHCSDSSLD VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKLREVDISYCHEISNISLALIG HCPNIK +KRNFFN LDPSQH GIVPD+YLN+CPQ
Subjt:  RHCSDSSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQ

Query:  DADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDI
        D D+EAAAIAKF+PNLEHLEL FSKLSAKALSLIC+GCP LK+LDLFGCVNLTSRDI NATSS ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTDI
Subjt:  DADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDI

Query:  FRI
        FRI
Subjt:  FRI

TrEMBL top hitse value%identityAlignment
A0A6J1E082 F-box protein SKIP1-like3.4e-14883.22Show/hide
Query:  MAEP--SASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIR
        M +P  SASPAWAELT ECLTN+ SRLS+E RWRGPMLVCK WFRAAT  SL S FDLEPRFDSA TESPAWW+P F+ +IDSMLRSV+ W+  SL LIR
Subjt:  MAEP--SASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIR

Query:  IRHCSDSSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACP
        IRHCSD SL +V QRCPNLEVLSIKSCPNVTD+SMAKIALGCQKLREVDISYC+EIS+ SLALIG HCPNIK LKRNFFNTLDPSQHTGIVP+ YLNACP
Subjt:  IRHCSDSSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACP

Query:  QDADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTD
        QD D+EAAAIAKF+PNLEHLELCFSKL+AKALSLIC+GCPNLKYLDLFGCVNLTSR+I NAT+S ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTD
Subjt:  QDADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTD

Query:  IFRI
        +FRI
Subjt:  IFRI

A0A6J1FHJ2 F-box protein SKIP1-like1.5e-14884.04Show/hide
Query:  MAEPS-----ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLY
        MAEPS     ASPAWAELT ECLTNVFSRLS+E RWRGPMLVCK W  AATDPSL S FDLEP FDS  TESPAWWTP+FE +IDSMLRSVVHW+L SL 
Subjt:  MAEPS-----ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLY

Query:  LIRIRHCSDSSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLN
        ++RIRHCSDSSLD VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIG HC NIK LKRNFFN LD SQH G VPDSYLN
Subjt:  LIRIRHCSDSSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLN

Query:  ACPQDADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRF
        ACPQ+ D+EAAAIAKF+PNLEHLELCFSKLSAKALSLIC+GC NLKYLDLFGC+NLTSRDI NATS  ENLEVRKP+F IPR VFHTERYGHW LYD+RF
Subjt:  ACPQDADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRF

Query:  QTDIFRI
        QTD FR+
Subjt:  QTDIFRI

A0A6J1G461 F-box protein SKIP1-like3.6e-15085.52Show/hide
Query:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS
        A P+WAELTQECLTN+FSRL+IE RWRGPMLVCK W RAATD SL S FDLEPRFDS  TESPAWW+P+FEA+IDSMLRS V W+L SL LIRIRHCSDS
Subjt:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS

Query:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA
        SL +VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIG HCPNIK LKRNFFNTLDPSQ  GIVPDSYLNACPQD D+EA
Subjt:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA

Query:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI
         AIAKF+PNLEHL+LCFSKLSAKAL+LIC GCPNLKYLDLFGCVNLTSRDIVNATS+ ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTDIFRI
Subjt:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI

A0A6J1I319 F-box protein SKIP1-like3.4e-14885.52Show/hide
Query:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS
        ASPAWAELT ECLTNVFSRL++E RWRGPMLVCK WF AATDP L S FDLEP FDSA TESPAWWTPRFE +IDSMLRSVVHW+L SL ++RIRHCSDS
Subjt:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS

Query:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA
        SLD VAQRCPNLEVLSIKSCPNVTDRSMAKIALGC+KLREVDISYCHEISNISLALIG HC NIK LKRNFFN LD SQH G VPDSYLNACPQ+ D+EA
Subjt:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA

Query:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI
        AAIAKF+PNLEHLELCFSKLSAKALSLIC+GC NLKYLDLFGCVNLTSRDI NATS  ENLEVRKP+F IPR VFHTERYGHW LYD+RFQTD FR+
Subjt:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI

A0A6J1KKL1 F-box protein SKIP1-like8.9e-14984.85Show/hide
Query:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS
        A  +WAELTQECLTN+FSRL+IE RWRGPMLVCK W RAATD SL S FDL+PRFDS  TESPAWW+P+FE +IDSMLRS V W+L SL LIRIRHCSDS
Subjt:  ASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDS

Query:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA
        SL +VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIG HCPNIK LKRNFFNTLDPSQ  GIVPDSYLNACPQD D+EA
Subjt:  SLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEA

Query:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI
         AIAKF+PNLEHLELCFSK+SAKAL+LIC GCPNLKYLDLFGCVNLTSRDIVNATSS ENLE+RKPNFYIPRSVFHTERYGHW LYD+RFQTDIFRI
Subjt:  AAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP11.4e-9056.76Show/hide
Query:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSLDI
        W  L  E L N+ SRL+I+  W GPM V K W     DP L S FDLEP FDS   ES   W+P FE ++D MLRSVV W+   L  IR+RHCSD +L  
Subjt:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSLDI

Query:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAIA
         A RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG +CPN++ILKRN  +    S+H G VP  YL+ACPQD D EA AI 
Subjt:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAIA

Query:  KFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRS--VFHTERYGHWNLYDQRFQTDIFRI
        K + NLEHLE+ FS+LS K L+ IC+GCP L+YLDLFGCV+L+SRDI +  S  + L EV+KP+ Y+PRS  V  TERYGHW LYD+RF     RI
Subjt:  KFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRS--VFHTERYGHWNLYDQRFQTDIFRI

Q9M096 Putative F-box/LRR-repeat protein 191.1e-7451.96Show/hide
Query:  PAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSL
        P W+ELT+ECL ++FSRLS E RW GPMLV K W  A  DP+L++ FDLE RF S   ES  WWTP FE ++DS LRSVV  +   L  IRIRHC++ SL
Subjt:  PAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSL

Query:  DIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAA
           A+RCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G  C N+KILKRN    L PS  T + P  YL   P+  + EA  
Subjt:  DIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAA

Query:  IAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRSVFHTERYGH
        I K++  L+HLE+ +S L+A+ L  +C GC NL+Y+DL GC++LT  DI   TS  +NL E+ KP+F  P +V    R G+
Subjt:  IAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRSVFHTERYGH

Q9M0U7 Putative F-box protein At4g054752.4e-1829Show/hide
Query:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRH-CSDSSLD
        W +L  E  T++  RLS+         +C+ W R   DPS+  + +L                  +E   +SM R +V  +   L  I I H  SDS L 
Subjt:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRH-CSDSSLD

Query:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVD-ISYCHEISNISLALIGNHCPNIKILKRNFFNT---LDPSQHTGIVPDSYLNACPQDADAE
         +  R  NL+ L I     +T++ +     G +KL  ++ +   H    + L  IG+ CP +K LK N   +    D SQ  G +P   L  C    D +
Subjt:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVD-ISYCHEISNISLALIGNHCPNIKILKRNFFNT---LDPSQHTGIVPDSYLNACPQDADAE

Query:  AAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNL-KYLDLFGCVNLTSRDIVNATSSRENLEVRKPN
        A AIA+ +P L HL+L  + L+   L+ I DGCP+L ++LD+  C N+     +     +   E+R+P+
Subjt:  AAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNL-KYLDLFGCVNLTSRDIVNATSSRENLEVRKPN

Q9S9V8 Putative F-box/LRR-repeat protein 97.5e-2029.63Show/hide
Query:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSS-LD
        WAEL  E  +++  RL      +    VCK W R   DPS+  + D+  + ++       ++       I+ +    V  +   L  I I +  ++S L+
Subjt:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSS-LD

Query:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAI
         +A R  NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G  CPN++ LK N          TG V         +  D  A AI
Subjt:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAI

Query:  AKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNL
        A+ +P L HL+L  + LS   L+ I +GCP+LK L L  C+N+
Subjt:  AKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNL

Q9S9V9 Putative F-box/LRR-repeat protein 237.3e-2332.1Show/hide
Query:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSLDI
        WAEL  +  +++  RL      +    VCK W R   DPS+  + D++ R D A           F+  ++SM R  V  +   L  I I +   + L +
Subjt:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSLDI

Query:  -VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAI
         +A R  NL+ L +  C  +TD  +AK       L  +++SYC   S  SL  IG  CPN+K LK N              P+   +      D  A AI
Subjt:  -VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAI

Query:  AKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNL
        A+ +P L HL+L  + L+ K L+ I DGCP+L++LDL  C N+
Subjt:  AKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNL

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein3.8e-1929.04Show/hide
Query:  EPSASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHC
        E   S  W EL  E  + +  RL           VC+ W R   DPS+  + D+    D              +  ++ M R  V  +   L  I I + 
Subjt:  EPSASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHC

Query:  SD-SSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQ-D
             L+ +A R  NL  L +  C  +TD    + A+    L E+++SYC   S  SL ++G  C N+K LK                    LN  PQ +
Subjt:  SD-SSLDIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQ-D

Query:  ADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPN
         D +A AIA+ +P L HL+LC + LS   L+ I D C NL++LDL  C N+     +          VR PN
Subjt:  ADAEAAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPN

AT4G05475.1 RNI-like superfamily protein1.7e-1929Show/hide
Query:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRH-CSDSSLD
        W +L  E  T++  RLS+         +C+ W R   DPS+  + +L                  +E   +SM R +V  +   L  I I H  SDS L 
Subjt:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRH-CSDSSLD

Query:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVD-ISYCHEISNISLALIGNHCPNIKILKRNFFNT---LDPSQHTGIVPDSYLNACPQDADAE
         +  R  NL+ L I     +T++ +     G +KL  ++ +   H    + L  IG+ CP +K LK N   +    D SQ  G +P   L  C    D +
Subjt:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVD-ISYCHEISNISLALIGNHCPNIKILKRNFFNT---LDPSQHTGIVPDSYLNACPQDADAE

Query:  AAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNL-KYLDLFGCVNLTSRDIVNATSSRENLEVRKPN
        A AIA+ +P L HL+L  + L+   L+ I DGCP+L ++LD+  C N+     +     +   E+R+P+
Subjt:  AAAIAKFIPNLEHLELCFSKLSAKALSLICDGCPNL-KYLDLFGCVNLTSRDIVNATSSRENLEVRKPN

AT4G05497.1 RNI-like superfamily protein5.3e-2129.63Show/hide
Query:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSS-LD
        WAEL  E  +++  RL      +    VCK W R   DPS+  + D+  + ++       ++       I+ +    V  +   L  I I +  ++S L+
Subjt:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSS-LD

Query:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAI
         +A R  NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G  CPN++ LK N          TG V         +  D  A AI
Subjt:  IVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAI

Query:  AKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNL
        A+ +P L HL+L  + LS   L+ I +GCP+LK L L  C+N+
Subjt:  AKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein7.6e-7651.96Show/hide
Query:  PAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSL
        P W+ELT+ECL ++FSRLS E RW GPMLV K W  A  DP+L++ FDLE RF S   ES  WWTP FE ++DS LRSVV  +   L  IRIRHC++ SL
Subjt:  PAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSL

Query:  DIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAA
           A+RCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G  C N+KILKRN    L PS  T + P  YL   P+  + EA  
Subjt:  DIVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAA

Query:  IAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRSVFHTERYGH
        I K++  L+HLE+ +S L+A+ L  +C GC NL+Y+DL GC++LT  DI   TS  +NL E+ KP+F  P +V    R G+
Subjt:  IAKFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRSVFHTERYGH

AT5G57900.1 SKP1 interacting partner 19.9e-9256.76Show/hide
Query:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSLDI
        W  L  E L N+ SRL+I+  W GPM V K W     DP L S FDLEP FDS   ES   W+P FE ++D MLRSVV W+   L  IR+RHCSD +L  
Subjt:  WAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSLDI

Query:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAIA
         A RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG +CPN++ILKRN  +    S+H G VP  YL+ACPQD D EA AI 
Subjt:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAIA

Query:  KFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRS--VFHTERYGHWNLYDQRFQTDIFRI
        K + NLEHLE+ FS+LS K L+ IC+GCP L+YLDLFGCV+L+SRDI +  S  + L EV+KP+ Y+PRS  V  TERYGHW LYD+RF     RI
Subjt:  KFIPNLEHLELCFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENL-EVRKPNFYIPRS--VFHTERYGHWNLYDQRFQTDIFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCATCGGCGTCGCCGGCATGGGCGGAGCTGACGCAGGAGTGCCTAACCAACGTGTTCTCTCGGCTCAGCATCGAGCACCGGTGGCGCGGGCCCATGCTCGT
CTGCAAGTTCTGGTTCCGCGCCGCCACCGACCCCTCTCTCCACTCCCGGTTCGACCTCGAACCCCGGTTCGACTCCGCCACCACCGAGTCGCCCGCCTGGTGGACGCCCC
GGTTCGAGGCCAGGATCGATTCCATGCTCCGATCTGTCGTCCACTGGACCCTTCTTTCTCTCTACCTTATTCGGATCAGACACTGCTCAGATTCTTCTCTCGATATCGTC
GCTCAAAGGTGCCCAAATCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACCGATCGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTTGA
CATAAGCTACTGTCACGAAATCTCCAACATATCTTTGGCGTTAATCGGCAATCATTGTCCAAATATCAAGATTTTAAAACGAAATTTTTTTAACACCCTAGACCCTTCGC
AACATACGGGAATTGTCCCCGACAGTTATCTAAATGCCTGCCCTCAAGATGCCGATGCAGAAGCAGCAGCGATTGCAAAGTTCATCCCAAACTTGGAGCATCTTGAACTC
TGCTTCTCTAAATTGTCTGCTAAAGCTCTTAGTTTGATCTGTGATGGATGTCCAAACCTTAAGTACTTGGATCTGTTTGGGTGTGTGAACCTGACAAGTCGTGATATAGT
GAACGCTACGTCAAGTCGGGAGAATTTGGAGGTTAGAAAACCAAATTTCTATATTCCGAGGTCAGTCTTCCACACGGAGAGGTATGGCCATTGGAATCTGTATGATCAGA
GGTTCCAAACAGATATTTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGCCATCGGCGTCGCCGGCATGGGCGGAGCTGACGCAGGAGTGCCTAACCAACGTGTTCTCTCGGCTCAGCATCGAGCACCGGTGGCGCGGGCCCATGCTCGT
CTGCAAGTTCTGGTTCCGCGCCGCCACCGACCCCTCTCTCCACTCCCGGTTCGACCTCGAACCCCGGTTCGACTCCGCCACCACCGAGTCGCCCGCCTGGTGGACGCCCC
GGTTCGAGGCCAGGATCGATTCCATGCTCCGATCTGTCGTCCACTGGACCCTTCTTTCTCTCTACCTTATTCGGATCAGACACTGCTCAGATTCTTCTCTCGATATCGTC
GCTCAAAGGTGCCCAAATCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACCGATCGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTTGA
CATAAGCTACTGTCACGAAATCTCCAACATATCTTTGGCGTTAATCGGCAATCATTGTCCAAATATCAAGATTTTAAAACGAAATTTTTTTAACACCCTAGACCCTTCGC
AACATACGGGAATTGTCCCCGACAGTTATCTAAATGCCTGCCCTCAAGATGCCGATGCAGAAGCAGCAGCGATTGCAAAGTTCATCCCAAACTTGGAGCATCTTGAACTC
TGCTTCTCTAAATTGTCTGCTAAAGCTCTTAGTTTGATCTGTGATGGATGTCCAAACCTTAAGTACTTGGATCTGTTTGGGTGTGTGAACCTGACAAGTCGTGATATAGT
GAACGCTACGTCAAGTCGGGAGAATTTGGAGGTTAGAAAACCAAATTTCTATATTCCGAGGTCAGTCTTCCACACGGAGAGGTATGGCCATTGGAATCTGTATGATCAGA
GGTTCCAAACAGATATTTTCCGAATTTGA
Protein sequenceShow/hide protein sequence
MAEPSASPAWAELTQECLTNVFSRLSIEHRWRGPMLVCKFWFRAATDPSLHSRFDLEPRFDSATTESPAWWTPRFEARIDSMLRSVVHWTLLSLYLIRIRHCSDSSLDIV
AQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGNHCPNIKILKRNFFNTLDPSQHTGIVPDSYLNACPQDADAEAAAIAKFIPNLEHLEL
CFSKLSAKALSLICDGCPNLKYLDLFGCVNLTSRDIVNATSSRENLEVRKPNFYIPRSVFHTERYGHWNLYDQRFQTDIFRI