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Sed0000101 (gene) of Chayote v1 genome

Gene IDSed0000101
OrganismSechium edule (Chayote v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationLG10:29786535..29789637
RNA-Seq ExpressionSed0000101
SyntenySed0000101
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021289.1 hypothetical protein SDJN02_17977 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-2881.82Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASLKA+SRLSSR HSLA K NKR SSS+ SPFKST QS  SAPS+S  S  SRLPLELSSQGSLMPLHSAIA+ARLISSL I SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

XP_022157551.1 uncharacterized protein LOC111024217 [Momordica charantia]2.4e-2880.81Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASLKA+SRLSSR HSLAPK  K+  SSEPSP KS+ QS PSA S+S  S  SRLPLELSSQGSLMPLHSAIA+ARLISSLTI SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

XP_022938270.1 uncharacterized protein LOC111444407 [Cucurbita moschata]2.4e-2881.82Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASLKA+SRLSSR HSLA K NKR SSS+ SPFKST QS  SAPS+S  S  SRLPLELSSQGSLMPLHSAIA+ARLISSL I SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

XP_022966032.1 uncharacterized protein LOC111465737 [Cucurbita maxima]1.3e-2982.83Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASL+A+SR+SSR HSLA K NKR SSS+PSPFKST QS  SAPS+S  S  SRLPLELSSQGSLMPLHSAIASARLISSLTI SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

XP_023538189.1 uncharacterized protein LOC111799036 [Cucurbita pepo subsp. pepo]1.3e-2983.84Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASLKA+SRLSSR HSLA K NKR SSS+PSPFKST QS  SAPS+S  S  SRLPLELSSQGSLMPLHSAIASARLISSL I SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein2.2e-2779.8Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASLKA+SRLSSR  SLAPKFNKR SSSE   FKST QS PSA S+S     SRLP+ELSSQGSLMPLHSAIA+ARLISSLTI S+GWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

A0A6J1DYI4 uncharacterized protein LOC1110242171.1e-2880.81Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASLKA+SRLSSR HSLAPK  K+  SSEPSP KS+ QS PSA S+S  S  SRLPLELSSQGSLMPLHSAIA+ARLISSLTI SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

A0A6J1FCN7 uncharacterized protein LOC1114444071.1e-2881.82Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASLKA+SRLSSR HSLA K NKR SSS+ SPFKST QS  SAPS+S  S  SRLPLELSSQGSLMPLHSAIA+ARLISSL I SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

A0A6J1G399 uncharacterized protein LOC1114503803.7e-2778.79Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASL+A+SRLSSR  SLAPK NKR  SSE SPFKS  QS PSA S+S  S  SRLPLELSSQGSLMPLHSAIA+ARLISSL+I S+GWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

A0A6J1HLX3 uncharacterized protein LOC1114657376.1e-3082.83Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        MASL+A+SR+SSR HSLA K NKR SSS+PSPFKST QS  SAPS+S  S  SRLPLELSSQGSLMPLHSAIASARLISSLTI SRGWGLVPQGISMPL
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein1.7e-1657.43Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKR--PSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMP
        MAS   I RLSS+ HSL  K +K     SS PSP KS+S S  ++  +  F    RLP+ELS   S++PLHSAIASARLISSL++ S+ WGLVPQGISMP
Subjt:  MASLKAISRLSSRRHSLAPKFNKR--PSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMP

Query:  L
        L
Subjt:  L

AT1G55205.2 unknown protein7.9e-1455.1Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKR--PSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGIS
        MAS   I RLSS+ HSL  K +K     SS PSP KS+S S  ++  +  F    RLP+ELS   S++PLHSAIASARLISSL++ S+ WGLVPQG S
Subjt:  MASLKAISRLSSRRHSLAPKFNKR--PSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGIS

AT3G13674.1 unknown protein7.1e-1552.48Show/hide
Query:  MASLKAISRLSSRRHSLAPKFNKRPS--SSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMP
        MAS + + R SSR  SL    + + +  SS PSP KS S   PS+ +S   +R SRLP+ELS   S++PLHSAIAS+RL+SSL++ S+ WGLVPQG+S+P
Subjt:  MASLKAISRLSSRRHSLAPKFNKRPS--SSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMP

Query:  L
        L
Subjt:  L

AT4G39300.1 unknown protein7.9e-0642Show/hide
Query:  ASLKAISR-LSSRRHSLAPK-FNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL
        ++L A SR L SR  ++  K  N +P+++  SPF S SQS P         R SR+   L S  +++PLHSA+ASARL SS+   S  W L+ QG++ PL
Subjt:  ASLKAISR-LSSRRHSLAPK-FNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL

AT4G39300.2 unknown protein1.5e-0440.4Show/hide
Query:  ASLKAISR-LSSRRHSLAPK-FNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMP
        ++L A SR L SR  ++  K  N +P+++  SPF S SQS P         R SR+   L S  +++PLHSA+ASARL SS+   S  W L+ Q + +P
Subjt:  ASLKAISR-LSSRRHSLAPK-FNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAGGCAATCTCTCGGCTATCATCTCGGCGGCATTCTCTCGCTCCAAAGTTCAACAAAAGGCCTTCATCTTCCGAACCATCTCCCTTCAAATCCACCTC
TCAATCTCCGCCCTCCGCACCTTCTTCTTCGCCCTTTTCTCGCATTTCCCGGTTGCCATTGGAGTTGAGCAGCCAGGGGTCACTGATGCCGCTGCACAGCGCCATAGCTT
CAGCCAGATTGATTTCGAGTTTGACGATTGGTTCTCGAGGATGGGGTTTAGTTCCTCAGGGTATTTCAATGCCTTTATGA
mRNA sequenceShow/hide mRNA sequence
GACAAAACCCTTATAAATTCTTGGAAGGCGAATTGATTACAGTTGAAGCTTGAAAGAGGTCTCCAATGGCGTCCTTAAAGGCAATCTCTCGGCTATCATCTCGGCGGCAT
TCTCTCGCTCCAAAGTTCAACAAAAGGCCTTCATCTTCCGAACCATCTCCCTTCAAATCCACCTCTCAATCTCCGCCCTCCGCACCTTCTTCTTCGCCCTTTTCTCGCAT
TTCCCGGTTGCCATTGGAGTTGAGCAGCCAGGGGTCACTGATGCCGCTGCACAGCGCCATAGCTTCAGCCAGATTGATTTCGAGTTTGACGATTGGTTCTCGAGGATGGG
GTTTAGTTCCTCAGGGTATTTCAATGCCTTTATGACAACTCCGCTTTGCAGGAAGTTGTTCTCTGCTGTTTTCTGTTTGTTGAAAATTGGTGATCAGGTGATCGATGATG
GTTGGAGTTATTACTATTGGGAAATTCATGTGGAGATTTGATGATGAATGGATGAGATCTTGTTGTAGTTTAATGATCTTGAATTCATTCAAGTTCTATTGGGGTTTATT
TAGGTCCGTTTGATAAACATTTGTTTGTAATTTTTGGTTTTTGACATTTAAGCCTACAACTACGATCTAGGTTTTTTCTTACTTGGTTGTCTACATCTTACCTATATGTT
AAGAAACCAAA
Protein sequenceShow/hide protein sequence
MASLKAISRLSSRRHSLAPKFNKRPSSSEPSPFKSTSQSPPSAPSSSPFSRISRLPLELSSQGSLMPLHSAIASARLISSLTIGSRGWGLVPQGISMPL