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Sed0000136 (gene) of Chayote v1 genome

Gene IDSed0000136
OrganismSechium edule (Chayote v1)
DescriptionBHLH domain-containing protein
Genome locationLG11:103900..104454
RNA-Seq ExpressionSed0000136
SyntenySed0000136
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044658 - Transcription factor bHLH92/bHLH041-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023537999.1 uncharacterized protein LOC111798884 [Cucurbita pepo subsp. pepo]2.1e-3165.22Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDDKQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVHES
        MD VFSL EA RAT L++ MQSFHP YI L         CLLNLD LFRE D  QPSSSL SFERR F++Y+ L+FNVEN LVPGHAF N+ISFLE+H+S
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDDKQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVHES

Query:  MLQTHSSSKIQRQFY
        +L  HSSS+IQ  FY
Subjt:  MLQTHSSSKIQRQFY

XP_038890718.1 putative transcription factor bHLH041 isoform X1 [Benincasa hispida]2.9e-3370.94Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH
        M+IVFSL +AARA  LQS MQSFH  YISL         CLLNLDG + E DD  KQPSSSL SFERR FN+Y  LIFN+EN LVPG+AFKNNISFLEV 
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH

Query:  ESMLQTHSSSKIQRQFY
        ES+LQTHSSS+IQRQFY
Subjt:  ESMLQTHSSSKIQRQFY

XP_038890719.1 putative transcription factor bHLH041 isoform X2 [Benincasa hispida]7.6e-3469.92Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH
        M+IVFSL +AARA  LQS MQSFH  YISL         CLLNLDG + E DD  KQPSSSL SFERR FN+Y  LIFN+EN LVPG+AFKNNISFLEV 
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH

Query:  ESMLQTHSSSKIQRQFYDVSVIF
        ES+LQTHSSS+IQRQFY  SV+F
Subjt:  ESMLQTHSSSKIQRQFYDVSVIF

XP_038890720.1 putative transcription factor bHLH041 isoform X3 [Benincasa hispida]2.9e-3370.94Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH
        M+IVFSL +AARA  LQS MQSFH  YISL         CLLNLDG + E DD  KQPSSSL SFERR FN+Y  LIFN+EN LVPG+AFKNNISFLEV 
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH

Query:  ESMLQTHSSSKIQRQFY
        ES+LQTHSSS+IQRQFY
Subjt:  ESMLQTHSSSKIQRQFY

XP_038890721.1 putative transcription factor bHLH041 isoform X4 [Benincasa hispida]2.9e-3370.94Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH
        M+IVFSL +AARA  LQS MQSFH  YISL         CLLNLDG + E DD  KQPSSSL SFERR FN+Y  LIFN+EN LVPG+AFKNNISFLEV 
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD--KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVH

Query:  ESMLQTHSSSKIQRQFY
        ES+LQTHSSS+IQRQFY
Subjt:  ESMLQTHSSSKIQRQFY

TrEMBL top hitse value%identityAlignment
A0A1S3C9K1 putative transcription factor bHLH041 isoform X21.1e-2560.63Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD----KQPSSSLVSFERRFFNDYRNLIFNVEN--GLVPGHAFKNNISF
        M+IVFS ++ ARA+ L S MQS    Y+ L         CL+NL GLFRE +D    KQPSSSL S +RR FNDY  LIFN+EN   LVPGHAFKNNISF
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD----KQPSSSLVSFERRFFNDYRNLIFNVEN--GLVPGHAFKNNISF

Query:  LEVHESMLQTHSSSKIQRQFYDVSVIF
        LEV ES+L THSSS+IQ QFY  SV+F
Subjt:  LEVHESMLQTHSSSKIQRQFYDVSVIF

A0A1S3CAK0 putative transcription factor bHLH041 isoform X13.1e-2561.16Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD----KQPSSSLVSFERRFFNDYRNLIFNVEN--GLVPGHAFKNNISF
        M+IVFS ++ ARA+ L S MQS    Y+ L         CL+NL GLFRE +D    KQPSSSL S +RR FNDY  LIFN+EN   LVPGHAFKNNISF
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDD----KQPSSSLVSFERRFFNDYRNLIFNVEN--GLVPGHAFKNNISF

Query:  LEVHESMLQTHSSSKIQRQFY
        LEV ES+L THSSS+IQ QFY
Subjt:  LEVHESMLQTHSSSKIQRQFY

A0A6J1DKX4 putative transcription factor bHLH0412.7e-2961.86Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC-------CLLNLDGLFREVDD----KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEV
        +D+VFSL E +RAT L+  M SFH IYI +        CLLNLD L+RE DD    +Q SSSL SF+RR FNDY  L+FNV+N LVPGHAF NNISFLE+
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC-------CLLNLDGLFREVDD----KQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEV

Query:  HESMLQTHSSSKIQRQFY
         ES+LQTH+S +IQRQFY
Subjt:  HESMLQTHSSSKIQRQFY

A0A6J1FCH4 uncharacterized protein LOC1114441438.5e-3164.96Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDDKQPSSSLVSFERRFFNDYRNLIFNVEN--GLVPGHAFKNNISFLEVH
        MD VFSL EA RAT L++ MQSFHP YI L         CLLNLD LFRE D  QPSSSL SFERR F++Y+ L+FNVEN   LVPGHAF NNI FLE+H
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDDKQPSSSLVSFERRFFNDYRNLIFNVEN--GLVPGHAFKNNISFLEVH

Query:  ESMLQTHSSSKIQRQFY
        +S+L THSSS+IQ  FY
Subjt:  ESMLQTHSSSKIQRQFY

A0A6J1HKA4 uncharacterized protein LOC1114653356.1e-2961.98Show/hide
Query:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDDKQPSSSLVSFERRFFNDYRNLIFNVE------NGLVPGHAFKNNISF
        MD VFSL EA RAT L++ MQSFHP YI L         CLLNLD LFRE D  QPSSSL SFERR F++Y+ LIF VE      N LVPGHAF NNI F
Subjt:  MDIVFSLHEAARATILQSFMQSFHPIYISLC--------CLLNLDGLFREVDDKQPSSSLVSFERRFFNDYRNLIFNVE------NGLVPGHAFKNNISF

Query:  LEVHESMLQTHSSSKIQRQFY
        LE+H+S+L  HSSS+IQ  FY
Subjt:  LEVHESMLQTHSSSKIQRQFY

SwissProt top hitse value%identityAlignment
Q9LTS4 Putative transcription factor bHLH0411.4e-0631.03Show/hide
Query:  IYISLCCLLNLDGLFREV-DDKQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVHESMLQTHSSSKIQRQFYDVSV
        + +S   L+++DG + E  ++   SSS  S  R  F++YR  +  ++NG VP  AF NN+ ++E+     Q  + +  QR FY + +
Subjt:  IYISLCCLLNLDGLFREV-DDKQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVHESMLQTHSSSKIQRQFYDVSV

Arabidopsis top hitse value%identityAlignment
AT5G56960.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.0e-0731.03Show/hide
Query:  IYISLCCLLNLDGLFREV-DDKQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVHESMLQTHSSSKIQRQFYDVSV
        + +S   L+++DG + E  ++   SSS  S  R  F++YR  +  ++NG VP  AF NN+ ++E+     Q  + +  QR FY + +
Subjt:  IYISLCCLLNLDGLFREV-DDKQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVHESMLQTHSSSKIQRQFYDVSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTGTATTTTCCCTCCATGAGGCTGCTAGAGCCACTATCCTTCAATCCTTTATGCAATCTTTTCACCCCATTTACATTTCCCTTTGTTGCTTGTTGAATCTTGA
TGGGTTGTTTCGAGAAGTTGATGATAAGCAACCAAGCAGTTCTTTGGTCAGTTTTGAACGGAGGTTTTTTAATGATTACAGGAATTTGATATTCAATGTGGAAAATGGCC
TTGTTCCTGGTCATGCTTTCAAGAACAATATTTCCTTTTTAGAGGTTCATGAATCTATGCTTCAAACCCACTCTTCTTCTAAAATCCAAAGGCAATTTTATGATGTAAGT
GTGATTTTTTTTAGGGATATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATTGTATTTTCCCTCCATGAGGCTGCTAGAGCCACTATCCTTCAATCCTTTATGCAATCTTTTCACCCCATTTACATTTCCCTTTGTTGCTTGTTGAATCTTGA
TGGGTTGTTTCGAGAAGTTGATGATAAGCAACCAAGCAGTTCTTTGGTCAGTTTTGAACGGAGGTTTTTTAATGATTACAGGAATTTGATATTCAATGTGGAAAATGGCC
TTGTTCCTGGTCATGCTTTCAAGAACAATATTTCCTTTTTAGAGGTTCATGAATCTATGCTTCAAACCCACTCTTCTTCTAAAATCCAAAGGCAATTTTATGATGTAAGT
GTGATTTTTTTTAGGGATATATAG
Protein sequenceShow/hide protein sequence
MDIVFSLHEAARATILQSFMQSFHPIYISLCCLLNLDGLFREVDDKQPSSSLVSFERRFFNDYRNLIFNVENGLVPGHAFKNNISFLEVHESMLQTHSSSKIQRQFYDVS
VIFFRDI