; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000166 (gene) of Chayote v1 genome

Gene IDSed0000166
OrganismSechium edule (Chayote v1)
Descriptionribosome-binding factor PSRP1, chloroplastic
Genome locationLG13:187716..190590
RNA-Seq ExpressionSed0000166
SyntenySed0000166
Gene Ontology termsGO:0045900 - negative regulation of translational elongation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0043022 - ribosome binding (molecular function)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR034694 - Ribosome hibernation promoting factor, long/plastid
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014676.1 Ribosome-binding factor PSRP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-12978.95Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSSSFSA--------------------LKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSS
        MAAL SS+QTN+L  HSLTPSSSSSSSS S+                    LK  +LSSH+S F NSCN    TI  APR RH + SF++RMSWDGPLSS
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSSSFSA--------------------LKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSS

Query:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        VKLI+Q KNLEL+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+R EEDAETVYASIDLVSSI+QRKLRKIKEK
Subjt:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        DSDHGRHMKGFDR K+R+PAPIVVED  EEEEVS EDGGE IDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
Subjt:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

Query:  ENGITEKVEPVTVEPAKEPSLAE
        E+G  EK+E VTVE A+E SLAE
Subjt:  ENGITEKVEPVTVEPAKEPSLAE

XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]3.3e-12980.13Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSS----------SFSALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLE
        MA L SS+Q N+L  HSL+P   SSS+           FSALK+ +LSS++S F NSC    TIETA R RH SNSF++RM+WDGPLSSVKLI+Q KNLE
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSS----------SFSALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLE

Query:  LSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        L+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+R EEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Subjt:  LSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV
        DR KVREPAPIVVED  EEEEV  EDGGEVIDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EK+EPV
Subjt:  DRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV

Query:  TVEPAKEPSLAE
        T+E  +EPSLAE
Subjt:  TVEPAKEPSLAE

XP_022141073.1 ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]5.2e-13583.12Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSSSF------------SALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKN
        MA L SS+ TN+L      PSSSS+ S+F            SALKI  LSSH+S F NSCN   TI+ APR RH +NSFT+RMSWDGPLSSVKLI+Q KN
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSSSF------------SALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKN

Query:  LELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMK
        LEL+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+RGEEDAETVYASIDLVSSIIQRKLRKIKEKDSD GRHMK
Subjt:  LELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMK

Query:  GFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVE
        GFDRLKVREPAPIVVEDEEEEEEVS+ED GEVIDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EK+E
Subjt:  GFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVE

Query:  PVTVEPAKEPSLAE
        PVTVEPA+EPSLAE
Subjt:  PVTVEPAKEPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]1.5e-12979.94Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSSS----------------FSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLI
        MAAL SS+QTN+L  HSLTPSSSSSSSS                 + LK  +LSSH+S F NSCN    TI  APR RH + SF++RMSWDGPLSSVKLI
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSSS----------------FSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLI

Query:  LQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH
        +Q KNLEL+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+R EEDAETVYASIDLVSSI+QRKLRKIKEKDSDH
Subjt:  LQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGI
        GRHMKGFDR K+REPAPIVVED  EEEEVS EDGGE IDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGI

Query:  TEKVEPVTVEPAKEPSLAE
         EK+E VTVE A+E SLAE
Subjt:  TEKVEPVTVEPAKEPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]1.5e-12980.13Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSS--------------SSSFSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQ
        MAAL SS+QTN+L  HSLTPSSSSS              S++ + LKI +LSSH+S F NSCN    TI  APR RH + SF++RMSWDGPLSSVKLI+Q
Subjt:  MAALISSIQTNILCGHSLTPSSSSS--------------SSSFSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQ

Query:  SKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGR
         KNLEL+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+R EEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGR
Subjt:  SKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGR

Query:  HMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITE
        HMKGFDR K+REPAPIVVED  EEEEVS EDGGE IDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G  E
Subjt:  HMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITE

Query:  KVEPVTVEPAKEPSLAE
        K+E VTVE A+E SLAE
Subjt:  KVEPVTVEPAKEPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic5.1e-12880.13Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSS----------SFSALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLE
        MA L SS+Q N+L  HSL P   SSS+           FSALK+ +LSS++S F NSC    TIETA R RH SNSF++RM+WDG LSSVKLI+Q KNLE
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSS----------SFSALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLE

Query:  LSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        L+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGV+R EEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Subjt:  LSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV
        DR KVREPAPIVVED  EEEEV  EDGGEVIDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EK+EPV
Subjt:  DRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV

Query:  TVEPAKEPSLAE
        TVE A+EPSLAE
Subjt:  TVEPAKEPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP15.1e-12880.13Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSS----------SFSALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLE
        MA L SS+Q N+L  HSL P   SSS+           FSALK+ +LSS++S F NSC    TIETA R RH SNSF++RM+WDG LSSVKLI+Q KNLE
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSS----------SFSALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLE

Query:  LSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        L+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGV+R EEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Subjt:  LSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV
        DR KVREPAPIVVED  EEEEV  EDGGEVIDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EK+EPV
Subjt:  DRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV

Query:  TVEPAKEPSLAE
        TVE A+EPSLAE
Subjt:  TVEPAKEPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic2.5e-13583.12Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSSSF------------SALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKN
        MA L SS+ TN+L      PSSSS+ S+F            SALKI  LSSH+S F NSCN   TI+ APR RH +NSFT+RMSWDGPLSSVKLI+Q KN
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSSSF------------SALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKN

Query:  LELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMK
        LEL+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+RGEEDAETVYASIDLVSSIIQRKLRKIKEKDSD GRHMK
Subjt:  LELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMK

Query:  GFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVE
        GFDRLKVREPAPIVVEDEEEEEEVS+ED GEVIDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EK+E
Subjt:  GFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVE

Query:  PVTVEPAKEPSLAE
        PVTVEPA+EPSLAE
Subjt:  PVTVEPAKEPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic7.1e-13079.94Show/hide
Query:  MAALISSIQTNILCGHSLTPSSSSSSSS----------------FSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLI
        MAAL SS+QTN+L  HSLTPSSSSSSSS                 + LK  +LSSH+S F NSCN    TI  APR RH + SF++RMSWDGPLSSVKLI
Subjt:  MAALISSIQTNILCGHSLTPSSSSSSSS----------------FSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLI

Query:  LQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH
        +Q KNLEL+EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+R EEDAETVYASIDLVSSI+QRKLRKIKEKDSDH
Subjt:  LQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH

Query:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGI
        GRHMKGFDR K+REPAPIVVED  EEEEVS EDGGE IDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G 
Subjt:  GRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGI

Query:  TEKVEPVTVEPAKEPSLAE
         EK+E VTVE A+E SLAE
Subjt:  TEKVEPVTVEPAKEPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic1.3e-12383.16Show/hide
Query:  TPSSSSSSSSFSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREV
        T  S  +S++ + LKI +LSSH+S F NSCN    TI  APR RH + SF++RMSWDGPLSSVKLI+Q KNLEL+EAVKKHVEEKVGKAVQKHSHLVREV
Subjt:  TPSSSSSSSSFSALKIQSLSSHSSGFINSCNF-LPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREV

Query:  DVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDG
        DVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+R EEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGRHMKGFDR K+REPAPIVVED  EEEEVS EDG
Subjt:  DVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDG

Query:  GEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPVTVEPAKEPSLAE
        GE IDEIVRTKYF+MPPLTVEEA+EQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG  EK+E VTVE A+E SLAE
Subjt:  GEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPVTVEPAKEPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic2.8e-9161.46Show/hide
Query:  LCGHSLTPSSSSSSSSFSALKIQS----LSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLELSEAVKKHVEEKVGKAVQ
        LC  ++  + + ++S  +++ + S    LSS  S F NSC+    +         +    V MSWDGPLSSVKLILQ +NLE+S+ V+ HVE+KVGK+V 
Subjt:  LCGHSLTPSSSSSSSSFSALKIQS----LSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLELSEAVKKHVEEKVGKAVQ

Query:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEE
        KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGVIR EEDAE++Y+SIDLVSSIIQRKLRKIK+K SDHGRHMKGF+R KVR+P P+ +  EE 
Subjt:  KHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEE

Query:  EEE-------VSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPVTVEPAKEPSLA
         EE       VSVED  + I+E+VRTKYF+MPPLT+ EAVEQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+ G TEK+E + V+  K+PS A
Subjt:  EEE-------VSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPVTVEPAKEPSLA

Query:  E
        E
Subjt:  E

P47908 Ribosome hibernation promotion factor8.0e-3039Show/hide
Query:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        +KL++Q  N+ ++E++  +VE K+ KA +       +VDV LSV      +     + EVT++     VIR +E +E +YASIDLVS  I R+LRK KEK
Subjt:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        +     H        V+E    V+ ++   + +  +   E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P74518 Ribosome hibernation promotion factor1.2e-3342.72Show/hide
Query:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKI
        +KL++Q  N+ ++EA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     VIR +E +E +YASIDLV+  I R+LRK 
Subjt:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKI

Query:  KEK--DSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG
        KE+  D  HG        +K  E    +VED+  EE +  +   E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG
Subjt:  KEK--DSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG

Query:  LIIPKE
        +I P +
Subjt:  LIIPKE

Q4L4H7 Ribosome hibernation promotion factor3.2e-1832.18Show/hide
Query:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEK
        ++  +   NL +++A++ ++E+K+GK ++++ + V      + V+  +        + EVT+   K+  +R EE  + +YA IDLV+S ++R++RK K +
Subjt:  VKLILQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEK

Query:  -DSDHGRHMKGFDRLKVREPAPIVVEDE----EEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG
         +  H  H          EP   V E +    E  ++V+ E   +   EI+R+K F++ P+  EEAV Q++ + HDFY F + ET   +I+YKRKDG YG
Subjt:  -DSDHGRHMKGFDRLKVREPAPIVVEDE----EEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYG

Query:  LI
        LI
Subjt:  LI

Q9RVE7 Ribosome hibernation promotion factor3.7e-1933.51Show/hide
Query:  LQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH
        L  +N+E++E ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L     G+IR EE    +YA+ID  S +++R+LRK K      
Subjt:  LQSKNLELSEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDH

Query:  GRHMKGFDRLKVRE-PAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         R+MK     +    P P   E   +    +++D  E   EIVR K F + P++ E+AV Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  GRHMKGFDRLKVRE-PAPIVVEDEEEEEEVSVEDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative1.9e-9865.71Show/hide
Query:  MAALISSIQTNI-LCGHSL-TPSSSSSSSSFSALKIQSLSSHS--SGFINSCNFLPTIETAPRIRHG--SNSFTVRMSWDGPLSSVKLILQSKNLELSEA
        MA L+   QT    CG  + TP  SSSS+  S + +    S    S F+    +    E   ++RH    +S  V+MSWDGPL+SVKLI+Q KNLELSE 
Subjt:  MAALISSIQTNI-LCGHSL-TPSSSSSSSSFSALKIQSLSSHS--SGFINSCNFLPTIETAPRIRHG--SNSFTVRMSWDGPLSSVKLILQSKNLELSEA

Query:  VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLK
        +K+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV+R EEDAETVYA IDLVS+IIQRKLRKIKEKDSDHGRHMKGF+RLK
Subjt:  VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLK

Query:  VREPA-PIVVEDEEEEEEVSV---EDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV
        VREP    VVED E+  + SV   E+  ++I EIVRTK F MPPLTV EAVEQL+ + HDFYGF+NEETGEINI+YKRK+GGYGLIIPK++G  EKVEP+
Subjt:  VREPA-PIVVEDEEEEEEVSV---EDGGEVIDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPV

Query:  TVEPAKEPSLAE
          E   E S AE
Subjt:  TVEPAKEPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCTGATATCTTCCATACAAACGAATATCCTTTGCGGCCATTCCTTAACTCCATCTTCATCTTCCTCTTCCTCTTCCTTCTCTGCTCTCAAAATTCAGTCCCT
TTCTTCCCATAGTTCTGGTTTCATCAATTCCTGCAACTTTCTTCCAACCATTGAAACCGCACCGCGCATCCGCCATGGTTCTAACTCTTTCACTGTTCGAATGTCCTGGG
ACGGCCCCCTCTCCTCTGTCAAATTAATTCTCCAATCCAAAAATTTGGAGTTATCTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGGAAGGCGGTTCAGAAGCAC
AGTCACTTAGTGAGAGAAGTGGATGTCAGGCTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGGCCAAGAATAAGAAGATGCGAGGTTACTTTGTTCACGAAGAAGCATGG
AGTTATTCGGGGAGAGGAAGATGCCGAGACCGTCTATGCGAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCATG
GTCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCTCCAATAGTAGTTGAAGATGAGGAAGAGGAAGAGGAAGTTTCTGTAGAAGATGGTGGAGAAGTT
ATTGATGAGATTGTTCGGACAAAATACTTCAATATGCCACCTTTGACAGTTGAAGAAGCAGTTGAACAACTCAAAAATATTGACCACGATTTCTACGGTTTTCGGAATGA
AGAAACAGGTGAGATAAACATATTATATAAAAGAAAGGATGGAGGATATGGACTTATCATCCCCAAAGAAAATGGAATAACGGAGAAAGTAGAACCTGTCACGGTTGAAC
CAGCCAAAGAACCTTCCTTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCTGATATCTTCCATACAAACGAATATCCTTTGCGGCCATTCCTTAACTCCATCTTCATCTTCCTCTTCCTCTTCCTTCTCTGCTCTCAAAATTCAGTCCCT
TTCTTCCCATAGTTCTGGTTTCATCAATTCCTGCAACTTTCTTCCAACCATTGAAACCGCACCGCGCATCCGCCATGGTTCTAACTCTTTCACTGTTCGAATGTCCTGGG
ACGGCCCCCTCTCCTCTGTCAAATTAATTCTCCAATCCAAAAATTTGGAGTTATCTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGGAAGGCGGTTCAGAAGCAC
AGTCACTTAGTGAGAGAAGTGGATGTCAGGCTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGGCCAAGAATAAGAAGATGCGAGGTTACTTTGTTCACGAAGAAGCATGG
AGTTATTCGGGGAGAGGAAGATGCCGAGACCGTCTATGCGAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCATG
GTCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCTCCAATAGTAGTTGAAGATGAGGAAGAGGAAGAGGAAGTTTCTGTAGAAGATGGTGGAGAAGTT
ATTGATGAGATTGTTCGGACAAAATACTTCAATATGCCACCTTTGACAGTTGAAGAAGCAGTTGAACAACTCAAAAATATTGACCACGATTTCTACGGTTTTCGGAATGA
AGAAACAGGTGAGATAAACATATTATATAAAAGAAAGGATGGAGGATATGGACTTATCATCCCCAAAGAAAATGGAATAACGGAGAAAGTAGAACCTGTCACGGTTGAAC
CAGCCAAAGAACCTTCCTTGGCGGAATGA
Protein sequenceShow/hide protein sequence
MAALISSIQTNILCGHSLTPSSSSSSSSFSALKIQSLSSHSSGFINSCNFLPTIETAPRIRHGSNSFTVRMSWDGPLSSVKLILQSKNLELSEAVKKHVEEKVGKAVQKH
SHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVIRGEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEEEVSVEDGGEV
IDEIVRTKYFNMPPLTVEEAVEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGITEKVEPVTVEPAKEPSLAE