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Sed0000195 (gene) of Chayote v1 genome

Gene IDSed0000195
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding protein CML10
Genome locationLG11:23985407..23985852
RNA-Seq ExpressionSed0000195
SyntenySed0000195
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]1.1e-3079.35Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS
        MGNSKS  Y RVLVP +EE+LANVFK+HDRDGDG LTKEELKQAF+YLGSRFS+FRV+EALR ADTNGDGVISM EM  LI YA+T KY IS
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2875.28Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKY
        MGNSKS  Y RVLVPLTEE+LA +FKSHDRDGDGKLTKEELKQAF YLGSRFSSFR  EALR AD +GDG I+M EM  LI Y +  KY
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKY

KAG6585663.1 hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2878.82Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQ
        MGN+KS  Y RVLVP TEE+LA +FKSHDRDGDGKL+KEELKQAF YLGSRFSSFRVKEALR ADTNGDG ISM EM  LI Y +
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQ

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2878.82Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQ
        MGN+KS  Y RVLVP TEE+LA +FKSHDRDGDGKL+KEELKQAF YLGSRFSSFRVKEALR ADTNGDG ISM EM  LI Y +
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQ

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2977.53Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKY
        MGN+KS  Y RVLVP TEE+LA +FKSHDRDGDGKL+KEELKQAF YLGSRFSSFRVKEALR ADTNGDG ISM EM  LI Y +  KY
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKY

TrEMBL top hitse value%identityAlignment
A0A0A0LP43 Uncharacterized protein3.6e-1657.83Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHY
        MG S  + +      LTE E+A VFK+HD+DGDG+LTKEELK AFKYLG +F++FRV +AL  AD N D VIS  EM  LI Y
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHY

A0A0A0LRB6 Uncharacterized protein2.5e-3078.26Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS
        MGNSKS  Y RVLVP +EE+LANVFK+HDRDGDG LTKEELKQAF+YLGSRF +FRV+EALR ADTNGDGVISM EM  LI YA+T KY IS
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS

A0A2N9FYQ0 Uncharacterized protein5.0e-1850.57Show/hide
Query:  KSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYI
        K + + R  +P TEE+L N+FKSHD DGDGKL+++E+K+AFKYLGSR+ ++R  +A+  AD + DG I   E+K L+ YA  C Y I
Subjt:  KSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein5.1e-3179.35Show/hide
Query:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS
        MGNSKS  Y RVLVP +EE+LANVFK+HDRDGDG LTKEELKQAF+YLGSRFS+FRV+EALR ADTNGDGVISM EM  LI YA+T KY IS
Subjt:  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS

A0A7N2KRS3 Uncharacterized protein2.2e-1852.87Show/hide
Query:  KSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYI
        K++ + R  VP  E++L N+FKSHD DGDGKL+++ELK AFKYLGSR+ ++R  +ALR AD N DG I+  E+K L+ YA  C Y +
Subjt:  KSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYI

SwissProt top hitse value%identityAlignment
P05933 Calmodulin7.7e-0845.31Show/hide
Query:  EEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        EEE+   FK  D+DG+G +T EEL      LG R S   V + +R ADT+GDGVI+  E   +I
Subjt:  EEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

P24044 Calmodulin6.5e-0740Show/hide
Query:  TEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        TEEEL   F+  DRDGDG ++ +EL+     LG + ++  V E +R AD +GDG I+  E   ++
Subjt:  TEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

P62203 Calmodulin6.5e-0740Show/hide
Query:  TEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        TEEEL   F+  DRDGDG ++ +EL+     LG + ++  V E +R AD +GDG I+  E   ++
Subjt:  TEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

Q9FZ75 Probable calcium-binding protein CML158.5e-0739.71Show/hide
Query:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        V +  E+L  +FKS DRDG+G ++  EL  A   +G   +   + E ++ ADTNGDGVIS  E  +++
Subjt:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

Q9LI84 Probable calcium-binding protein CML168.5e-0738.24Show/hide
Query:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        V + +E+L  VF+S DRDG+G +T  EL  +   +G   +   + E +  AD+NGDGVIS +E  +++
Subjt:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family6.0e-0839.71Show/hide
Query:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        V +  E+L  +FKS DRDG+G ++  EL  A   +G   +   + E ++ ADTNGDGVIS  E  +++
Subjt:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

AT3G25600.1 Calcium-binding EF-hand family protein6.0e-0838.24Show/hide
Query:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        V + +E+L  VF+S DRDG+G +T  EL  +   +G   +   + E +  AD+NGDGVIS +E  +++
Subjt:  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

AT3G51920.1 calmodulin 93.0e-0736.51Show/hide
Query:  EELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI
        +EL  VF+  DRDGDG +++ EL +  K +G + ++   +  +R AD +GDG +S HE   ++
Subjt:  EELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLI

AT4G03290.1 EF hand calcium-binding protein family5.1e-0739.34Show/hide
Query:  ELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNL
        EL  VF+  D+DGDGK+T +EL ++FK LG       + + ++  D NGDG + + E   L
Subjt:  ELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNL

AT4G12860.1 EF hand calcium-binding protein family6.6e-0739.34Show/hide
Query:  ELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNL
        EL+ VF+  D++GDGK+ K ELK  FK +G       + E +   D NGDG + + E  +L
Subjt:  ELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTCGAAAAGTATACGCTACATCCGAGTCTTGGTTCCGCTGACAGAAGAGGAACTCGCTAACGTTTTTAAGAGCCACGACCGAGATGGTGACGGAAAGCTGAC
AAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCGCGCTTCAGCTCCTTCAGAGTCAAAGAAGCCCTACGTTTTGCCGATACCAACGGTGACGGAGTCATCAGCA
TGCATGAGATGAAAAATCTTATTCACTATGCCCAAACTTGTAAATATTATATATCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAATTTCATCCCCTTCCATCGTCTTCTCGTTCCATGGGGAACTCGAAAAGTATACGCTACATCCGAGTCTTGGTTCCGCTGACAGAAGAGGAACTCGCTAACGTTTTT
AAGAGCCACGACCGAGATGGTGACGGAAAGCTGACAAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCGCGCTTCAGCTCCTTCAGAGTCAAAGAAGCCCTACG
TTTTGCCGATACCAACGGTGACGGAGTCATCAGCATGCATGAGATGAAAAATCTTATTCACTATGCCCAAACTTGTAAATATTATATATCTTAGTTAAAACTATGCATAT
GTTTTCTCAAACGAATATGTTAAATTAGTTATTGTTTATGCTTCATGTGTGTATTATTGTGTATTTAAATTAGTGATAAACAAAATTGGTTGAAATTAAAACCTCCAACA
TCTAGG
Protein sequenceShow/hide protein sequence
MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS