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Sed0000205 (gene) of Chayote v1 genome

Gene IDSed0000205
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationLG07:43579997..43580543
RNA-Seq ExpressionSed0000205
SyntenySed0000205
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]2.8e-3388.51Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SSTS EF FQT+SNSYNFNGPTGK +GFS+SADPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

KAG6607585.1 hypothetical protein SDJN03_00927, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3186.21Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSK+FPKY SSTS EF F+TQSNSYNFNG   KGSGFSSSADPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSD RYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]1.4e-3287.36Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SSTS EF FQT+SNSYNFNGPT K +GFS+SADPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]2.6e-3185.06Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SS S EF FQT+SNSYNFNGPT K +GFS+S DPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

XP_023536368.1 uncharacterized protein LOC111797558 [Cucurbita pepo subsp. pepo]3.1e-3286.21Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SS S EF FQT+SNSYNFNGPTGK +GFS+S DPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein6.7e-3387.36Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SSTS EF FQT+SNSYNFNGPT K +GFS+SADPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 81.4e-3388.51Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SSTS EF FQT+SNSYNFNGPTGK +GFS+SADPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

A0A6J1ABS7 uncharacterized protein LOC1104164454.7e-2670.11Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFP+Y SS S EFDF+ +SNSYNFNGP  K +GF++S DPEL+RK+RIASYNVF ME K+KS V++SVKW K+KFSD+RYG+
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366831.3e-3185.06Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SS S EF FQT+SNSYNFNGPT K +GFS+S DPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRYGL
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726834.8e-3183.91Show/hide
Query:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        MEKSKSFPKY SS S EF FQT+SNSYNFNGPTG  +GFS+S DPELQRKRRIASYNVFNMENKVKS VKNS KW KTKFSDIRY L
Subjt:  MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)1.3e-0737Show/hide
Query:  EKSKSFP----------KYLSSTSDEFDFQT----QSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        EKS+S P           Y +ST + +   T     SN+ +      K  GF    + E+QRK+R+ASYNV+ +E +VK  +K S KWFK   S+  YGL
Subjt:  EKSKSFP----------KYLSSTSDEFDFQT----QSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

AT3G05725.1 Protein of unknown function (DUF3511)2.0e-0543.18Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL
        DPE++RKRR+A Y +++ E K+K  ++ S KW K + S I +G+
Subjt:  DPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL

AT3G62640.1 Protein of unknown function (DUF3511)5.9e-0546.51Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYG
        D E +RK+RIA+Y  + +E KVKS VK    W K ++S I +G
Subjt:  DPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYG

AT4G09890.1 Protein of unknown function (DUF3511)4.8e-1550.54Show/hide
Query:  MEKSKSFPKYLSS-TSDEFDF-QTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFS----DIRYGL
        M+ SKS+ +Y SS ++DEF + Q +SNSYNFNGP         + DPE++RK+R+ASYN+F  E K+KS +KNS KW K KFS     IRY +
Subjt:  MEKSKSFPKYLSS-TSDEFDF-QTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFS----DIRYGL

AT5G11970.1 Protein of unknown function (DUF3511)9.7e-0848.84Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYG
        DPELQRK+R+ASY ++ +E KVK   +NS +W K +++ + YG
Subjt:  DPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCAAATCATTTCCCAAGTACTTGTCCTCGACTTCGGACGAGTTCGATTTCCAAACCCAATCCAACTCTTACAATTTCAATGGCCCGACTGGCAAGGGGAG
CGGGTTTTCGTCCTCCGCCGATCCCGAGCTCCAGAGGAAGAGAAGGATTGCATCTTATAATGTTTTCAACATGGAAAACAAGGTCAAGTCCAGAGTAAAGAACAGTGTCA
AGTGGTTCAAAACAAAGTTTAGTGACATTCGTTATGGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
CTCTTTATAAAAACCATCCAACACAAACCCAACTCCTAGTTTAATTTTGTAGTTACAAGAGAGCCTGCAGAGAAAAGGGCCAAAAGGCTAATTCCAGGCTATATGGAGAA
GAGCAAATCATTTCCCAAGTACTTGTCCTCGACTTCGGACGAGTTCGATTTCCAAACCCAATCCAACTCTTACAATTTCAATGGCCCGACTGGCAAGGGGAGCGGGTTTT
CGTCCTCCGCCGATCCCGAGCTCCAGAGGAAGAGAAGGATTGCATCTTATAATGTTTTCAACATGGAAAACAAGGTCAAGTCCAGAGTAAAGAACAGTGTCAAGTGGTTC
AAAACAAAGTTTAGTGACATTCGTTATGGTTTGTAAGTTTATTAACAATTAAGGGGTTTTTTTCTTTTACTTTTCTTCTTCCTTTGTCATGTAAACAGTTTGGTCTTTGC
TTTTGTTATCTTCAAAGATGTTGAACAAAATTGAAGATATAATTAAAGGGTTTGGAAGGGGTGTGTTTGGTTGTGGCTTTGTTTCTCCATACATACACACACACACA
Protein sequenceShow/hide protein sequence
MEKSKSFPKYLSSTSDEFDFQTQSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSRVKNSVKWFKTKFSDIRYGL