; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000228 (gene) of Chayote v1 genome

Gene IDSed0000228
OrganismSechium edule (Chayote v1)
DescriptionAT-rich interactive domain protein
Genome locationLG08:2109112..2111001
RNA-Seq ExpressionSed0000228
SyntenySed0000228
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589553.1 hypothetical protein SDJN03_14976, partial [Cucurbita argyrosperma subsp. sororia]4.4e-6972.46Show/hide
Query:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG
        MALTIT   A    GGGIL++ +TR P NQ+L RR+A   PS EART LH+V +KKSS R GR D KNRRSS T+TKEQ+E+Q   EE+RNR A      
Subjt:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG

Query:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT
         I ++ GVAFDV+ N+PELPGLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPE S+ DVFESNPT
Subjt:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT

Query:  EVAPSLE
        EVAPSLE
Subjt:  EVAPSLE

XP_008453388.1 PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo]9.8e-6973.56Show/hide
Query:  MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERD
        M LTIT   A AG  GGIL++  TR PP N  L RR+A   PS EART LH+VQAKKSS RTGRFD KNRRSS TT KEQ +E   EEE+RNR AG E  
Subjt:  MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERD

Query:  GPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNP
         PIV++ GV FDV+ N+PELPGLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPE S+ DVFESNP
Subjt:  GPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNP

Query:  TEVAPSLE
        TEVAPSLE
Subjt:  TEVAPSLE

XP_022134616.1 uncharacterized protein LOC111006843 [Momordica charantia]1.5e-7778.26Show/hide
Query:  MALTITTARAA--AGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG
        MALTIT   AA  +GGGIL++ +T+ P NQ LLRR+A  PPSNEART LH+VQAKKSS RTGRFD KNRRSS TTTKEQ+E    EEE+RNR A  ERDG
Subjt:  MALTITTARAA--AGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG

Query:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT
        P V++ GVAFDV+ N+PELPGLQPDFWEG +WDP GFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPE S+ DVFESNPT
Subjt:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT

Query:  EVAPSLE
        EVAPSLE
Subjt:  EVAPSLE

XP_022987248.1 uncharacterized protein LOC111484859 [Cucurbita maxima]3.4e-6971.5Show/hide
Query:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG
        MALTIT   A    GGGIL++ +TR P NQ L RR+A   PS EART LH+V +KKSS R GR D KNRRSS +T    KE++E EEE+RNR A      
Subjt:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG

Query:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT
         I ++ GVAFDV+ N+PELPGLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPE S+ DVFESNPT
Subjt:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT

Query:  EVAPSLE
        EVAPSLE
Subjt:  EVAPSLE

XP_038876354.1 uncharacterized protein LOC120068690 [Benincasa hispida]7.7e-7474.88Show/hide
Query:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG
        MALTIT   A    GGGIL++ +TR P NQ LLRR+A  PPS EART L++VQAKKSS RTGRFDGKNRRSS TT       QE EEE+RNR A   RD 
Subjt:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG

Query:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT
        P V++ GVAFDV+ N+PELPGLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFKDTPAYKESVQT+EILEEPE S+ DVFESNPT
Subjt:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT

Query:  EVAPSLE
        EVAPSLE
Subjt:  EVAPSLE

TrEMBL top hitse value%identityAlignment
A0A1S3BW57 uncharacterized protein LOC1034941204.7e-6973.56Show/hide
Query:  MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERD
        M LTIT   A AG  GGIL++  TR PP N  L RR+A   PS EART LH+VQAKKSS RTGRFD KNRRSS TT KEQ +E   EEE+RNR AG E  
Subjt:  MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERD

Query:  GPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNP
         PIV++ GV FDV+ N+PELPGLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPE S+ DVFESNP
Subjt:  GPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNP

Query:  TEVAPSLE
        TEVAPSLE
Subjt:  TEVAPSLE

A0A5A7UV79 Putative AT-rich interactive domain-containing protein 5A4.7e-6973.56Show/hide
Query:  MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERD
        M LTIT   A AG  GGIL++  TR PP N  L RR+A   PS EART LH+VQAKKSS RTGRFD KNRRSS TT KEQ +E   EEE+RNR AG E  
Subjt:  MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERD

Query:  GPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNP
         PIV++ GV FDV+ N+PELPGLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EPE S+ DVFESNP
Subjt:  GPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNP

Query:  TEVAPSLE
        TEVAPSLE
Subjt:  TEVAPSLE

A0A6J1BYA9 uncharacterized protein LOC1110068437.3e-7878.26Show/hide
Query:  MALTITTARAA--AGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG
        MALTIT   AA  +GGGIL++ +T+ P NQ LLRR+A  PPSNEART LH+VQAKKSS RTGRFD KNRRSS TTTKEQ+E    EEE+RNR A  ERDG
Subjt:  MALTITTARAA--AGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG

Query:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT
        P V++ GVAFDV+ N+PELPGLQPDFWEG +WDP GFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQE+LEEPE S+ DVFESNPT
Subjt:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT

Query:  EVAPSLE
        EVAPSLE
Subjt:  EVAPSLE

A0A6J1E7K1 uncharacterized protein LOC1114301296.2e-6971.98Show/hide
Query:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG
        MALTIT   A    GGGIL++ +TR P NQ+L RR+A   PS EART LH+V +KKSS R GR D KNRRSS T+TKEQ+E+Q   EE++NR A      
Subjt:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG

Query:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT
         I ++ GVAFDV+ N+PELPGLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPE S+ DVFESNPT
Subjt:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT

Query:  EVAPSLE
        EVAPSLE
Subjt:  EVAPSLE

A0A6J1JIX0 uncharacterized protein LOC1114848591.6e-6971.5Show/hide
Query:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG
        MALTIT   A    GGGIL++ +TR P NQ L RR+A   PS EART LH+V +KKSS R GR D KNRRSS +T    KE++E EEE+RNR A      
Subjt:  MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDG

Query:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT
         I ++ GVAFDV+ N+PELPGLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPE S+ DVFESNPT
Subjt:  PIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPT

Query:  EVAPSLE
        EVAPSLE
Subjt:  EVAPSLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73885.1 unknown protein3.1e-2847.92Show/hide
Query:  FDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNE
        FDG+N  S      E  +   +      R  G  +D P           +  + +LPGL+PD +EG +WD  GFF++YLWAFGI FALI+ G+A  TYNE
Subjt:  FDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNE

Query:  GATDFKDTPAYKESVQTQEILEEPEGS-SADVFESNPTEVAPSL
        GATDFK+TP YKE++Q++++L+E E S S DVFESNPTEVAP++
Subjt:  GATDFKDTPAYKESVQTQEILEEPEGS-SADVFESNPTEVAPSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTGACCATAACCACCGCCAGAGCCGCCGCCGGCGGTGGAATCCTCCACCAAATCACCACCAGAAATCCTCCTAACCAACTCCTCCTCCGCCGCAGCGCGTTCTC
TCCGCCGTCCAACGAAGCCCGCACCGCCCTCCACATCGTTCAGGCCAAGAAATCCTCATCTCGAACCGGCCGATTCGACGGTAAGAACCGACGGAGCTCGGCGACGACGA
CTAAGGAACAGAAAGAAGAACAGGAACTAGAAGAAGAAGATCGGAATCGGGCGGCGGGATTTGAAAGAGACGGTCCGATCGTTGATAGCGGCGGCGTAGCGTTTGATGTG
GAGGCGAATATGCCGGAGTTGCCTGGCCTTCAGCCGGATTTCTGGGAGGGCTCGCAGTGGGATCCGTTCGGCTTCTTCCTCGAATACTTGTGGGCTTTTGGCATCGCTTT
TGCGCTTATTGCTTGTGGGATTGCTGTCACTACATATAACGAAGGAGCAACCGATTTTAAGGACACGCCTGCGTATAAAGAATCGGTTCAAACTCAAGAGATATTAGAAG
AACCCGAGGGATCGAGCGCAGATGTCTTTGAATCCAATCCAACTGAGGTGGCTCCTAGTTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
TAACTATCTTAAAAATCTCAATATCCCTCTCCTTATCCGCTCGTAAAACCTTCCTCTCCATTTCTCAGACTCTGAGCTCACTCTCCTCCACTCAAATGGCTCTGACCATA
ACCACCGCCAGAGCCGCCGCCGGCGGTGGAATCCTCCACCAAATCACCACCAGAAATCCTCCTAACCAACTCCTCCTCCGCCGCAGCGCGTTCTCTCCGCCGTCCAACGA
AGCCCGCACCGCCCTCCACATCGTTCAGGCCAAGAAATCCTCATCTCGAACCGGCCGATTCGACGGTAAGAACCGACGGAGCTCGGCGACGACGACTAAGGAACAGAAAG
AAGAACAGGAACTAGAAGAAGAAGATCGGAATCGGGCGGCGGGATTTGAAAGAGACGGTCCGATCGTTGATAGCGGCGGCGTAGCGTTTGATGTGGAGGCGAATATGCCG
GAGTTGCCTGGCCTTCAGCCGGATTTCTGGGAGGGCTCGCAGTGGGATCCGTTCGGCTTCTTCCTCGAATACTTGTGGGCTTTTGGCATCGCTTTTGCGCTTATTGCTTG
TGGGATTGCTGTCACTACATATAACGAAGGAGCAACCGATTTTAAGGACACGCCTGCGTATAAAGAATCGGTTCAAACTCAAGAGATATTAGAAGAACCCGAGGGATCGA
GCGCAGATGTCTTTGAATCCAATCCAACTGAGGTGGCTCCTAGTTTGGAATGATCTTGATATTTCGGTATCGAAAAAAGATTACACAACCTGGATAGGTTATCACCCTGG
CAAAGTAACATAGGGTACTGTGTGAATTTGTAATGGCATATTTCTCTAGGTATGTTATGACAACTTTGTCTTATTGTATCTAGTCAAGATTTTGATTTTATATGTCTTAG
TTTTCTTATTGGTATATTGTTTATTTAGGTCATTTTGATTTCTTTCATTCTATCAATCTGTTATGGCCTTTGTGATGTTGACTTA
Protein sequenceShow/hide protein sequence
MALTITTARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDV
EANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPTEVAPSLE