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Sed0000245 (gene) of Chayote v1 genome

Gene IDSed0000245
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationLG11:21175102..21175741
RNA-Seq ExpressionSed0000245
SyntenySed0000245
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064729.1 hypothetical protein E6C27_scaffold82G00330 [Cucumis melo var. makuwa]1.4e-2871.29Show/hide
Query:  MDDERRGY--GRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRF-SDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGW
        MDD+RR    G  SMEIE+YYGP        +++++S  K K T G SSKSWRF +DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGW
Subjt:  MDDERRGY--GRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRF-SDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGW

Query:  W
        W
Subjt:  W

KAG6585752.1 hypothetical protein SDJN03_18485, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2969.81Show/hide
Query:  GRPS-MEIERYYGPPRPPPP-SFAQTKISGNKPKITCG--------------FSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ
        GR S MEIE YYGPPRPPPP S+ QT+ISG K K T G               +SK WRF DPEFQRKKRVASYKMYSVEGKMKGSFR SFRWLK KYTQ
Subjt:  GRPS-MEIERYYGPPRPPPP-SFAQTKISGNKPKITCG--------------FSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ

Query:  MLYGWW
        +LYGWW
Subjt:  MLYGWW

KAG6598609.1 hypothetical protein SDJN03_08387, partial [Cucurbita argyrosperma subsp. sororia]8.1e-2972.16Show/hide
Query:  DERRG-YGRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        + RRG YG  SM+IE YYGPP+        ++I G K K + G SSKS++FSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
Subjt:  DERRG-YGRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW

KAG7020663.1 hypothetical protein SDJN02_17349, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-2969.16Show/hide
Query:  GRPS-MEIERYYGPPRPPPP-SFAQTKISGNKPKITCG---------------FSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYT
        GR S MEIE YYGPPRPPPP S+ QT+ISG K K T G                +SK WRF DPEFQRKKRVASYKMYSVEGKMKGSFR SFRWLK KYT
Subjt:  GRPS-MEIERYYGPPRPPPP-SFAQTKISGNKPKITCG---------------FSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYT

Query:  QMLYGWW
        Q+LYGWW
Subjt:  QMLYGWW

KAG7029545.1 hypothetical protein SDJN02_07884, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-3173.74Show/hide
Query:  MDDERRG-YGRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        MDD+RRG YG  SM+IE YYGPP+        ++I G K K + G SSKS++FSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
Subjt:  MDDERRG-YGRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW

TrEMBL top hitse value%identityAlignment
A0A0A0KFK3 Uncharacterized protein1.4e-2674.71Show/hide
Query:  MEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRF-SDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        MEIE+YYGP        +++++S  K K T G SSKSWRF +DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
Subjt:  MEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRF-SDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW

A0A5A7VGY1 Uncharacterized protein6.7e-2971.29Show/hide
Query:  MDDERRGY--GRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRF-SDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGW
        MDD+RR    G  SMEIE+YYGP        +++++S  K K T G SSKSWRF +DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGW
Subjt:  MDDERRGY--GRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRF-SDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGW

Query:  W
        W
Subjt:  W

A0A5E4E7K0 PREDICTED: DUF35111.5e-2562.39Show/hide
Query:  GYGRPSMEIERYYGPPRPPPP--------SFAQTKISGN--------KPKITCGFSSKS-WRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDK
        G G  +M++E YYGPPRPP          S+AQT+++ N        K KIT G SSKS W   DPE QRKKRVASYKMYSVEGKMKGSFRKSFRWLKDK
Subjt:  GYGRPSMEIERYYGPPRPPPP--------SFAQTKISGN--------KPKITCGFSSKS-WRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDK

Query:  YTQMLYGWW
         TQ++YGWW
Subjt:  YTQMLYGWW

A0A5N6RKJ1 Uncharacterized protein2.4e-2660.55Show/hide
Query:  RGYGRPSMEIERYYGPPRPPP----------PSFAQTKISGN------KPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDK
        R YG  +M++  YYGPP P P           S+ QT++  N      K K   G SSKSW F DPEFQRKKRVASYKMYSVEGKMKGS R+SFRWLKDK
Subjt:  RGYGRPSMEIERYYGPPRPPP----------PSFAQTKISGN------KPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDK

Query:  YTQMLYGWW
        YTQ+LYGWW
Subjt:  YTQMLYGWW

A0A6P3ZT47 uncharacterized protein LOC1074200716.9e-2657.98Show/hide
Query:  MDDERR----GYGRPSMEIERYYGPPRPPP---------PSFAQTKISGN--------KPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSF
        M+D  R     YG   M++E YYGPP   P          S++QT++  N        K K T G SS+SW F+DPEFQRKKRVASYKMYSVEGKMKGSF
Subjt:  MDDERR----GYGRPSMEIERYYGPPRPPP---------PSFAQTKISGN--------KPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSF

Query:  RKSFRWLKDKYTQMLYGWW
        RKSFRWLKDKYTQ++YGWW
Subjt:  RKSFRWLKDKYTQMLYGWW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)1.2e-0946.15Show/hide
Query:  SGNKPKITCGFSSKSWR-FSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        S NK K +     K ++   + E QRKKRVASY +Y VEG++KGS +KSF+W K+  +  +YG W
Subjt:  SGNKPKITCGFSSKSWR-FSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW

AT2G19460.1 Protein of unknown function (DUF3511)2.7e-1462.5Show/hide
Query:  PKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQML
        PK     SS SW F DP+ QRKKRV SY+ Y+VEGK+KGSFRKSF+W+KDK  ++L
Subjt:  PKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQML

AT3G13910.1 Protein of unknown function (DUF3511)3.3e-1272.09Show/hide
Query:  SSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKD
        +S+SW FSDPE +RK+RVA YK+YSVE KMKGS RKSF+W KD
Subjt:  SSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKD

AT3G62640.1 Protein of unknown function (DUF3511)2.4e-1039.74Show/hide
Query:  YGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYG
        + P  PPPP       S +K + T    +  WR  D E +RKKR+A+YK Y++EGK+K + +K F W+KD+Y+ +++G
Subjt:  YGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYG

AT5G11970.1 Protein of unknown function (DUF3511)1.2e-1951Show/hide
Query:  RRGYGRPSMEIERYYGPPRPPPPSFA------QTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        +R YG   M+I+ Y+G       S++      +  I   K + +    SKSW  +DPE QRKKRVASYKMY VEGK+KGSFR SFRWLK +YTQ++YGWW
Subjt:  RRGYGRPSMEIERYYGPPRPPPPSFA------QTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGAGAGGAGAGGTTATGGAAGGCCATCCATGGAAATTGAAAGGTATTATGGCCCTCCAAGGCCACCTCCTCCCTCCTTTGCACAAACCAAGATTTCAGGCAA
CAAACCCAAAATCACATGTGGGTTTTCCTCAAAATCATGGAGATTTTCAGACCCTGAGTTTCAGAGGAAGAAGAGAGTTGCCAGTTACAAGATGTATTCTGTTGAAGGAA
AGATGAAGGGCTCTTTTAGAAAGAGTTTCAGATGGCTTAAGGATAAATACACCCAAATGCTTTATGGCTGGTGGTGA
mRNA sequenceShow/hide mRNA sequence
TTTCTAAAAAATAAAATAATAAAAAAATCTCAAGTCTGTCCAAGTTAAAATACCAAGGCCAACCCATCATCCCTTTTCTTCATGTTCCTCCTCCACCATGGATGATGAGA
GGAGAGGTTATGGAAGGCCATCCATGGAAATTGAAAGGTATTATGGCCCTCCAAGGCCACCTCCTCCCTCCTTTGCACAAACCAAGATTTCAGGCAACAAACCCAAAATC
ACATGTGGGTTTTCCTCAAAATCATGGAGATTTTCAGACCCTGAGTTTCAGAGGAAGAAGAGAGTTGCCAGTTACAAGATGTATTCTGTTGAAGGAAAGATGAAGGGCTC
TTTTAGAAAGAGTTTCAGATGGCTTAAGGATAAATACACCCAAATGCTTTATGGCTGGTGGTGATCACTCTCACTTCTTTTATCATTCAAAACTATATCTGTATTTTGCA
AATTTCCATTCAATTGCTAGTATTAGCCTATTTGTATCTGCTCTGAGATTGATCTGTAAGAAGTTTCTGTTTGGTTTAATGTTTGTTGTTCATCTCTTTTTATCTGCTTG
TTCTATTGGGTTTAACTCTTTTTGGAGTTTTGAATATGTTCAAATGTAAACAAGTCTAAGTTTGAAAATAAATTTGTTTGATTTGATTCA
Protein sequenceShow/hide protein sequence
MDDERRGYGRPSMEIERYYGPPRPPPPSFAQTKISGNKPKITCGFSSKSWRFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW