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Sed0000251 (gene) of Chayote v1 genome

Gene IDSed0000251
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:3694062..3696311
RNA-Seq ExpressionSed0000251
SyntenySed0000251
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138679.1 uncharacterized protein LOC101205088 [Cucumis sativus]1.9e-4380.53Show/hide
Query:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR
        PKSPF WFS LPKFDFRLPFP N   KPP  V+ E R A +DA KPEFVRFPKAEL VA+VEAEADVSGKTSNP V+WQVYALGGFLILSWAW RWKERR
Subjt:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR

Query:  SQRRSNDEDEDED
         QRRSND+DEDED
Subjt:  SQRRSNDEDEDED

XP_008456569.1 PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo]1.8e-4176.72Show/hide
Query:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR
        PKSPF WFS LPKFDFRLPFP N   K P  V+ E R A +DA KPEFVRFPKAEL VA+VEAEADVSGKTSNP V+WQVYALGGFLILSWAW RWKERR
Subjt:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR

Query:  SQRRSNDEDEDEDEDS
         QRRSND+DED+  D+
Subjt:  SQRRSNDEDEDEDEDS

XP_022133498.1 uncharacterized protein LOC111006063 [Momordica charantia]1.1e-3872.73Show/hide
Query:  ETPKS--PFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRN----AADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWA
        ETPKS  P +WFS LPKF FRLP P   A KPP+AV+ E +N    A DDA KPEFVRFPKA++AVA+VEAEAD+SGKTSNP VIWQVYALGGFLILSWA
Subjt:  ETPKS--PFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRN----AADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWA

Query:  WERWKERRSQRRSNDEDEDED
        W RWKERR QRR ND+++DED
Subjt:  WERWKERRSQRRSNDEDEDED

XP_023550789.1 uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]3.1e-3871.9Show/hide
Query:  ETPKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKE
        E+PK PF WFS LPKFD RLP P N   KPP+ V+ E     DDA KPEFVRFPKA LAV +VE EADVSGKTSNP VIWQVYALGGFLILSWAW RWKE
Subjt:  ETPKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKE

Query:  RRSQRRSNDEDEDEDEDSPDT
        RR +RRS  +D+DE+EDS DT
Subjt:  RRSQRRSNDEDEDEDEDSPDT

XP_038886165.1 uncharacterized protein LOC120076415 [Benincasa hispida]3.6e-4276.67Show/hide
Query:  ETPKS--PFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERW
        ++PKS  PF WFS LPKFDFRLPFP N   KPP+ V+ E R A DDA KPEFVRFPKAEL VA+VEAEADVSGKTSNP VIWQVYALGGFLILSWAW RW
Subjt:  ETPKS--PFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERW

Query:  KERRSQRRSNDEDEDEDEDS
        KERR QRRSND++EDED  +
Subjt:  KERRSQRRSNDEDEDEDEDS

TrEMBL top hitse value%identityAlignment
A0A0A0LSR5 Uncharacterized protein9.2e-4480.53Show/hide
Query:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR
        PKSPF WFS LPKFDFRLPFP N   KPP  V+ E R A +DA KPEFVRFPKAEL VA+VEAEADVSGKTSNP V+WQVYALGGFLILSWAW RWKERR
Subjt:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR

Query:  SQRRSNDEDEDED
         QRRSND+DEDED
Subjt:  SQRRSNDEDEDED

A0A1S3C3J3 uncharacterized protein LOC1034964858.6e-4276.72Show/hide
Query:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR
        PKSPF WFS LPKFDFRLPFP N   K P  V+ E R A +DA KPEFVRFPKAEL VA+VEAEADVSGKTSNP V+WQVYALGGFLILSWAW RWKERR
Subjt:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR

Query:  SQRRSNDEDEDEDEDS
         QRRSND+DED+  D+
Subjt:  SQRRSNDEDEDEDEDS

A0A5D3CKR2 Uncharacterized protein8.6e-4276.72Show/hide
Query:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR
        PKSPF WFS LPKFDFRLPFP N   K P  V+ E R A +DA KPEFVRFPKAEL VA+VEAEADVSGKTSNP V+WQVYALGGFLILSWAW RWKERR
Subjt:  PKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERR

Query:  SQRRSNDEDEDEDEDS
         QRRSND+DED+  D+
Subjt:  SQRRSNDEDEDEDEDS

A0A6J1BZA3 uncharacterized protein LOC1110060635.2e-3972.73Show/hide
Query:  ETPKS--PFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRN----AADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWA
        ETPKS  P +WFS LPKF FRLP P   A KPP+AV+ E +N    A DDA KPEFVRFPKA++AVA+VEAEAD+SGKTSNP VIWQVYALGGFLILSWA
Subjt:  ETPKS--PFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRN----AADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWA

Query:  WERWKERRSQRRSNDEDEDED
        W RWKERR QRR ND+++DED
Subjt:  WERWKERRSQRRSNDEDEDED

A0A6J1JVP7 uncharacterized protein LOC1114892984.4e-3871.07Show/hide
Query:  ETPKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKE
        E+PK PF WFS LPKFD RLP P N   KPP+ V+ E     +DA KPEFVRFPKA LAV +VE EADVSGKTSNP VIWQVYALGGFLILSWAW RWKE
Subjt:  ETPKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKE

Query:  RRSQRRSNDEDEDEDEDSPDT
        RR +RRS  +D+DE+EDS DT
Subjt:  RRSQRRSNDEDEDEDEDSPDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52230.1 unknown protein4.6e-1141.96Show/hide
Query:  FDFRLPFPPNA---ANKPPSAVLVEPRNAADDAPKPEFVRFP-KAELAVATVEAEAD-VSGKTSNPVVIWQVYALGGFLILSWAWERWKER--RSQRRSN
        F F  P PP A   AN P      EP  +       E V FP     +   ++ EA+  SG+TSN V++WQVYALGGFL+L WAW RW ER  RS ++  
Subjt:  FDFRLPFPPNA---ANKPPSAVLVEPRNAADDAPKPEFVRFP-KAELAVATVEAEAD-VSGKTSNPVVIWQVYALGGFLILSWAWERWKER--RSQRRSN

Query:  DEDEDEDEDSPD
          D+D+ +D  D
Subjt:  DEDEDEDEDSPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAAACCCCTAAATCCCCTTTCCATTGGTTTTCTCTTCTTCCCAAATTCGATTTCCGATTGCCTTTCCCGCCCAACGCCGCCAATAAACCGCCTTCTGCGGTGCT
TGTTGAACCCCGAAACGCCGCCGACGACGCTCCGAAGCCGGAGTTCGTCAGGTTTCCTAAAGCAGAGTTGGCCGTCGCTACGGTGGAGGCGGAGGCCGATGTCTCCGGCA
AAACCTCCAATCCGGTGGTCATCTGGCAGGTATATGCTCTTGGAGGGTTTCTAATTTTGAGTTGGGCATGGGAAAGATGGAAGGAGAGAAGGTCCCAAAGACGTTCAAAC
GATGAAGATGAGGACGAGGACGAGGATTCCCCGGATACATAA
mRNA sequenceShow/hide mRNA sequence
AAAGCATTGGATTATCCGCCGCTTGAAGAGCAACGCCATGACAAGTATTTGATCCCACCTTTTCTCCTCTTTCAACATTTCAAAAACTCAAAAATGTCTGAAACCCCTAA
ATCCCCTTTCCATTGGTTTTCTCTTCTTCCCAAATTCGATTTCCGATTGCCTTTCCCGCCCAACGCCGCCAATAAACCGCCTTCTGCGGTGCTTGTTGAACCCCGAAACG
CCGCCGACGACGCTCCGAAGCCGGAGTTCGTCAGGTTTCCTAAAGCAGAGTTGGCCGTCGCTACGGTGGAGGCGGAGGCCGATGTCTCCGGCAAAACCTCCAATCCGGTG
GTCATCTGGCAGGTATATGCTCTTGGAGGGTTTCTAATTTTGAGTTGGGCATGGGAAAGATGGAAGGAGAGAAGGTCCCAAAGACGTTCAAACGATGAAGATGAGGACGA
GGACGAGGATTCCCCGGATACATAATTTTGTGTTTACCATGAAAAAAGGCCTTAATAAATGTGATAGTTACAGTTTTAATGCTAGAAAGAATCAATCTTGAGTTTTACAT
CGTTTAGTTGTAATTTTGGGTTATGAATCAGTCATTTCCCAACCCTTTTGTTGATCCTTGAACATGATCTTAGTGTTAAACAAAATCTGTCTAATTGAGGTTCTCTGAAC
TTTTTGGTACAAAGGCAACAATTTTTAATGTCAATAAGAG
Protein sequenceShow/hide protein sequence
MSETPKSPFHWFSLLPKFDFRLPFPPNAANKPPSAVLVEPRNAADDAPKPEFVRFPKAELAVATVEAEADVSGKTSNPVVIWQVYALGGFLILSWAWERWKERRSQRRSN
DEDEDEDEDSPDT