CuGenDBv2

Gene ID	Sed0000290
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG12:32854427..32855174
RNA-Seq Expression	Sed0000290
Synteny	Sed0000290
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587786.1 hypothetical protein SDJN03_16351, partial [Cucurbita argyrosperma subsp. sororia]

5.8e-27

64.29

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Query:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG
        + GGG +KKR++K+R KKK IHKVIDYLLSD YLFAP++SP PFNS+ +PRK      DIEIRER KD R  ++K+ DYLKSDCY+YA +V PQSF G
Subjt:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG

KAG7035711.1 hypothetical protein SDJN02_02509, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.8e-27

64.29

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Query:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG
        + GGG +KKR++K+R KKK IHKVIDYLLSD YLFAP++SP PFNS+ +PRK      DIEIRER KD R  ++K+ DYLKSDCY+YA +V PQSF G
Subjt:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG

XP_022933890.1 uncharacterized protein LOC111441170 isoform X1 [Cucurbita moschata]

5.8e-27

64.29

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Query:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG
        + GGG +KKR++K+R KKK IHKVIDYLLSD YLFAP++SP PFNS+ +PRK      DIEIRER KD R  ++K+ DYLKSDCY+YA +V PQSF G
Subjt:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG

XP_022968868.1 uncharacterized protein LOC111468025 [Cucurbita maxima]

6.4e-26

63.27

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Query:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG
        + GGG +KKR++K+R KKK IHKVIDYLLSD  LFAP++SP PFNS+ +PRK      DIEIRER KD R  ++K+ DYLKSDCY+YA +V PQSF G
Subjt:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG

XP_023532011.1 uncharacterized protein LOC111794104 [Cucurbita pepo subsp. pepo]

1.7e-26

63.27

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Query:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG
        + GGG +KKR++K+R KKK IHKVIDYLLSD YLFAP++SP PFNS+ +PRK      DIE RER KD R  ++K+ DYLKSDCY+YA +V PQSF G
Subjt:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9M0 uncharacterized protein LOC103487306 isoform X2

2.1e-22

66.67

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Query:  GGDCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAP-IVSPYPF-NSFPSPRKDIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQS
        GG  GGGI KKR+I KR+KKK IHKVIDYLLSD YLFAP ++SP P  NS  +P + IEIR RTKD R LV+K +DYLKSDCY+YA +V P+S
Subjt:  GGDCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAP-IVSPYPF-NSFPSPRKDIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQS

A0A1S3B9N8 uncharacterized protein LOC103487306 isoform X3

2.1e-22

66.67

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Query:  GGDCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAP-IVSPYPF-NSFPSPRKDIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQS
        GG  GGGI KKR+I KR+KKK IHKVIDYLLSD YLFAP ++SP P  NS  +P + IEIR RTKD R LV+K +DYLKSDCY+YA +V P+S
Subjt:  GGDCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAP-IVSPYPF-NSFPSPRKDIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQS

A0A5D3B7P7 Uncharacterized protein

2.1e-22

66.67

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Query:  GGDCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAP-IVSPYPF-NSFPSPRKDIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQS
        GG  GGGI KKR+I KR+KKK IHKVIDYLLSD YLFAP ++SP P  NS  +P + IEIR RTKD R LV+K +DYLKSDCY+YA +V P+S
Subjt:  GGDCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAP-IVSPYPF-NSFPSPRKDIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQS

A0A6J1F636 uncharacterized protein LOC111441170 isoform X1

2.8e-27

64.29

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Query:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG
        + GGG +KKR++K+R KKK IHKVIDYLLSD YLFAP++SP PFNS+ +PRK      DIEIRER KD R  ++K+ DYLKSDCY+YA +V PQSF G
Subjt:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG

A0A6J1HZC1 uncharacterized protein LOC111468025

3.1e-26

63.27

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Query:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG
        + GGG +KKR++K+R KKK IHKVIDYLLSD  LFAP++SP PFNS+ +PRK      DIEIRER KD R  ++K+ DYLKSDCY+YA +V PQSF G
Subjt:  DCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRK------DIEIRERTKDKRGLVEKIEDYLKSDCYLYAPMVEPQSFTG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G57790.1 unknown protein

3.7e-11

35.79

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Query:  KRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVS-----------PYPFNSFPSPRKDIEIR-------ERTKDKRGLVEKIEDYLKSDCYLYAPMV
        ++ +K++  ++ +  ++ YL SD+YLFAP+ S           P P NS PS   DI +        E+   KR + EK+++YLKSDCY+Y+PM+
Subjt:  KRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVS-----------PYPFNSFPSPRKDIEIR-------ERTKDKRGLVEKIEDYLKSDCYLYAPMV

AT5G57790.2 unknown protein

3.7e-11

35.79

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Query:  KRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVS-----------PYPFNSFPSPRKDIEIR-------ERTKDKRGLVEKIEDYLKSDCYLYAPMV
        ++ +K++  ++ +  ++ YL SD+YLFAP+ S           P P NS PS   DI +        E+   KR + EK+++YLKSDCY+Y+PM+
Subjt:  KRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVS-----------PYPFNSFPSPRKDIEIR-------ERTKDKRGLVEKIEDYLKSDCYLYAPMV

Sequences

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CDS sequence

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mRNA sequence

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ATGAGGCCCCAATTTGGACTCTGTTTCTCAGACACAGAGAAATTGAAGAAATGGCGAAGAAAATGGTGTGGCGGCGGCGGCGGAGACGGCGGCGACTGCGGCGGCGGGAT
TCTAAAGAAGAGAATCATAAAGAAGAGGAACAAGAAGAAAACGATTCACAAAGTGATCGATTATCTGTTATCGGATTCTTACTTATTTGCTCCAATTGTTTCTCCTTATC
CTTTTAATTCTTTTCCCTCACCCAGAAAAGATATTGAAATTAGGGAACGCACAAAAGATAAGCGGGGTTTGGTGGAGAAGATTGAGGATTACTTGAAATCTGATTGCTAC
TTGTATGCTCCCATGGTTGAACCTCAATCCTTTACAGGTACTTTTTATTTCTTGATTTAACATCATTCAAAATATGGTATCCAGCACGTGAATTCGAACCTTGATAAATT
GTGAAAATGGTATAAATATAAATTTAGTCTAAGAATGTTATGGCTGTTTGTTTGACATATTTATGTAGTATCTGGGTCAACAAGTTTGTTTGACATATTTAGGTTAAGGA
ATTATATTGAGGAATTAAAAATAAGTGGTTAAAAATAATTGAGTAATTATAAAAATTTAAAAAGGATCCTTATGGCAGG

Protein sequence

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MRPQFGLCFSDTEKLKKWRRKWCGGGGGDGGDCGGGILKKRIIKKRNKKKTIHKVIDYLLSDSYLFAPIVSPYPFNSFPSPRKDIEIRERTKDKRGLVEKIEDYLKSDCY
LYAPMVEPQSFTGTFYFLI

Sed0000290 (gene) of Chayote v1 genome