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Sed0000300 (gene) of Chayote v1 genome

Gene IDSed0000300
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG04:47043782..47044153
RNA-Seq ExpressionSed0000300
SyntenySed0000300
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]5.3e-3782.14Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        M +RHLLKRN+GVS +PKGYCAVYVG+SQKKRF+IP++YLN PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF + ISH+NDL
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.1e-3487.34Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIIS
        MGIR LLKRNQGVSTIPKGYCAVYVGE+QKKRFVIP+++LN+ CFQELL QTEE+FGYHHPMGGLTIHCRDDIFTD+IS
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIIS

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.7e-3583.33Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        M + HLLKR+QGVS+IPKGYCAVYVGESQKKRF+IP+SYLN+PCFQELL QTEEEFGYHHPMGGLTIHC+D IFT++IS LNDL
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]7.6e-2872.62Show/hide
Query:  MGIRHLLKR--NQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLN
        M I  LL+R   +GV+ +PKGYCAVYVGE QKKRFVIPV+YLN+PCFQ LL Q EEEFGY+HPMGGLTI CR+DIFT++IS LN
Subjt:  MGIRHLLKR--NQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLN

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.3e-3888.1Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        MG+R LLKRNQGVS +PKGYCAVYVGESQKKRFVIP+SYLN+PCFQELLCQ EEEFGY+HPMGGLTIHCRDDIFTD+IS LNDL
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein5.2e-3884.52Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        M ++HLLKRNQGVS +PKGYCAVYVGESQKKRFVIP++YLN PCFQ+LLCQTEEEFGY+HPMGGLTIHCRDDIFTD+IS++NDL
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

A0A0A0K5U4 Uncharacterized protein8.2e-3683.33Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        M + HLLKR+QGVS+IPKGYCAVYVGESQKKRF+IP+SYLN+PCFQELL QTEEEFGYHHPMGGLTIHC+D IFT++IS LNDL
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

A0A0A0K5V1 Uncharacterized protein1.8e-3071.59Show/hide
Query:  MGIRHLLKR-----NQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLND
        MG+R LL+R     NQ VS +PKGYCAVYVGE+QKKRFVIP++YLN+PCFQ+LL QT EEF Y+HPMGGLT HC DDIF D+ISHLN+
Subjt:  MGIRHLLKR-----NQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLND

A0A5A7U363 Auxin-induced protein 15A-like2.6e-3782.14Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        M +RHLLKRN+GVS +PKGYCAVYVG+SQKKRF+IP++YLN PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF + ISH+NDL
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

A0A6J1C4W2 auxin-responsive protein SAUR24-like6.1e-3988.1Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        MG+R LLKRNQGVS +PKGYCAVYVGESQKKRFVIP+SYLN+PCFQELLCQ EEEFGY+HPMGGLTIHCRDDIFTD+IS LNDL
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A58.5e-2266.67Show/hide
Query:  IPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        +PKGY AVYVG+ + +RF IPVSYLNEP FQELL Q EEEFGY HPMGGLTI C+++ F ++ +HLN+L
Subjt:  IPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

P33080 Auxin-induced protein X10A1.9e-2166.67Show/hide
Query:  IPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL
        +PKGY  VYVG+ + +RF+IPVSYLN+P FQ+LL Q EEEFGY HPMGGLTI C++D F  + SHLNDL
Subjt:  IPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL

Q9FJF7 Auxin-responsive protein SAUR223.8e-2256.1Show/hide
Query:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL
        +G + +L R+   VS  PKG+ AVYVGESQKKR+++P+SYLN+P FQ LL ++E+EFG+ HPMGGLTI C +D F ++ S L
Subjt:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL

Q9FJG0 Auxin-responsive protein SAUR201.5e-2156.25Show/hide
Query:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIIS
        +G + +L R+    S  PKG+ AVYVGESQKKR+++P+SYLN+P FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S
Subjt:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIIS

Q9FK62 Auxin-responsive protein SAUR247.7e-2358.54Show/hide
Query:  MGIRHLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL
        +G + +L R+ G  S  PKG+ AVYVGESQKKR+++PVSYLN+P FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S L
Subjt:  MGIRHLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL

Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family1.0e-2256.25Show/hide
Query:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIIS
        +G + +L R+    S  PKG+ AVYVGESQKKR+++P+SYLN+P FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S
Subjt:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIIS

AT5G18030.1 SAUR-like auxin-responsive protein family2.3e-2255.56Show/hide
Query:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL
        +G + +L R+   S  PKG+ AVYVGESQKKR+++P+SYL++P FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S L
Subjt:  MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL

AT5G18050.1 SAUR-like auxin-responsive protein family2.7e-2356.1Show/hide
Query:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL
        +G + +L R+   VS  PKG+ AVYVGESQKKR+++P+SYLN+P FQ LL ++E+EFG+ HPMGGLTI C +D F ++ S L
Subjt:  MGIRHLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL

AT5G18060.1 SAUR-like auxin-responsive protein family2.3e-2262.86Show/hide
Query:  VSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLN
        VS  PKG+ AVYVGESQKKR+++P+SYLN+P FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S L+
Subjt:  VSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLN

AT5G18080.1 SAUR-like auxin-responsive protein family5.5e-2458.54Show/hide
Query:  MGIRHLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL
        +G + +L R+ G  S  PKG+ AVYVGESQKKR+++PVSYLN+P FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S L
Subjt:  MGIRHLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCAACGATTCCCAAGGGCTATTGTGCTGTCTATGTTGGAGAGAGCCAAAAGAAGCGGTTCGTGATTCCAGT
TTCTTACTTGAATGAACCTTGTTTTCAAGAGTTACTTTGTCAGACTGAGGAAGAATTCGGTTACCATCATCCGATGGGTGGTCTTACTATTCATTGCCGAGACGACATCT
TCACCGATATCATCTCTCATTTGAATGATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATTCTTAGTCAAAAGAAACTTTCCTCTTTCAAAACTTGTTGTATACAACATGGGAATTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCAACGATTCCCAAGGGCTATT
GTGCTGTCTATGTTGGAGAGAGCCAAAAGAAGCGGTTCGTGATTCCAGTTTCTTACTTGAATGAACCTTGTTTTCAAGAGTTACTTTGTCAGACTGAGGAAGAATTCGGT
TACCATCATCCGATGGGTGGTCTTACTATTCATTGCCGAGACGACATCTTCACCGATATCATCTCTCATTTGAATGATTTATGAGAGATACATTGACATTTATAGCATAC
AAATCTTGTAGAATAGACAATAGAGATATAGATACAACCAGA
Protein sequenceShow/hide protein sequence
MGIRHLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPVSYLNEPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFTDIISHLNDL