; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000315 (gene) of Chayote v1 genome

Gene IDSed0000315
OrganismSechium edule (Chayote v1)
DescriptionZinc finger BED domain-containing protein DAYSLEEPER-like
Genome locationLG10:8717770..8719553
RNA-Seq ExpressionSed0000315
SyntenySed0000315
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0043039 - tRNA aminoacylation (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44253.1 hypothetical protein Csa_016011 [Cucumis sativus]6.0e-2458.93Show/hide
Query:  KFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKS-SSITEE--DISCSSKEVDSSSPR---LNKSTPIDAEVLE
        ++EKYWSVIH VLAI T+LDPRFKMRLIEFYF QIY SH  VE++RV++LC +L+  Y S SSI EE    S S+ + D SS +    NK TP+DA+VLE
Subjt:  KFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKS-SSITEE--DISCSSKEVDSSSPR---LNKSTPIDAEVLE

Query:  TILHDQDSDDED
         + HDQD DD++
Subjt:  TILHDQDSDDED

TYK23151.1 zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa]9.0e-2058.06Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKST
        MA+RMI+KFEKYWSVIH  LAI T LDP+FKMRLIEFYFPQIY SH   E++RV++LC +L+ +Y S S T E+   S+    S+S R   S+
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKST

XP_023738785.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Lactuca sativa]5.7e-1454.32Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKE
        MA  MI KF++YWS IH VLAI TILDPRFKM+LIE+YFP+IY   S  EV+R++ L  EL+  YK     E   S ++ E
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKE

XP_023742636.1 zinc finger BED domain-containing protein RICESLEEPER 2 [Lactuca sativa]8.7e-1555.56Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKE
        MA  MIAKF++YWS+IH VLAI TILDPRFKM+LIE+YFP+IY   S  EV+R++ L  EL+  YK     E   S ++ E
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKE

XP_038884881.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]1.6e-2171.62Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEED
        MA+RMIAKFEKYWSVIH VLAI T+LDPRFKMRLI+FYFPQIY  H TVE++RV+DLC +L+ +Y S+S T E+
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEED

TrEMBL top hitse value%identityAlignment
A0A0A0K403 DUF4413 domain-containing protein2.9e-2458.93Show/hide
Query:  KFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKS-SSITEE--DISCSSKEVDSSSPR---LNKSTPIDAEVLE
        ++EKYWSVIH VLAI T+LDPRFKMRLIEFYF QIY SH  VE++RV++LC +L+  Y S SSI EE    S S+ + D SS +    NK TP+DA+VLE
Subjt:  KFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKS-SSITEE--DISCSSKEVDSSSPR---LNKSTPIDAEVLE

Query:  TILHDQDSDDED
         + HDQD DD++
Subjt:  TILHDQDSDDED

A0A2N9EE68 Uncharacterized protein8.0e-1436.22Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDI--SCSSKEV-------------DSS
        M  RM+ KF+ YW+VIH+++A+ TILDPR+K+ L+E+YFP IY   +  E+QR++D+C E++  Y S  + +E    +C+S++V              S 
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDI--SCSSKEV-------------DSS

Query:  SPRLNKSTPIDAEVLETILHDQDSDDE
          +   ST  +   ++ IL D D +DE
Subjt:  SPRLNKSTPIDAEVLETILHDQDSDDE

A0A2N9I292 Uncharacterized protein8.0e-1446.43Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDI--SCSSKEV
        MA RM+ KF+ YW+VIH V+A+ TILDPR+K+ L+E+YFP IY   +  E+QR++D+C E++  Y S  + +E    +C+S++V
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDI--SCSSKEV

A0A5C7H408 DUF4413 domain-containing protein8.0e-1451.35Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEED
        MA  M+ KF+KYW VIH +LAI TILDPRFK++LIE+YFP+IY + S   + RV+ +C +L+N Y+  +   +D
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEED

A0A5D3DHK7 Zinc finger BED domain-containing protein DAYSLEEPER-like4.4e-2058.06Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKST
        MA+RMI+KFEKYWSVIH  LAI T LDP+FKMRLIEFYFPQIY SH   E++RV++LC +L+ +Y S S T E+   S+    S+S R   S+
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKST

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.8e-0743.08Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYY
        +A  M  +F+KYW   + VLAI  ++DPRFKM+L+EF + +IY   +   V+ V D   EL N Y
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYY

P03010 Putative AC9 transposase1.2e-0640.58Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSS
        MA  M  KFEKYW V +  LA+   LDPR+K  LIEFY  + +     V V     + ++L  +Y S S
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSS

P08770 Putative AC transposase1.2e-0640.58Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSS
        MA  M  KFEKYW V +  LA+   LDPR+K  LIEFY  + +     V V     + ++L  +Y S S
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSS

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 29.1e-0741.54Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYY
        +A  M  +F+KYW   + VLAI  ++DPRFKM+L+EF + +IY   +   V+ V D   EL   Y
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYY

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 31.0e-0529.9Show/hide
Query:  MIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKSTPIDAEVLE
        M  +F+KYW   + VLAI  ++DPRFKM+L+EF + +I+   +   V+ V D   EL + Y +      D   +      + P  ++    D  + E
Subjt:  MIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKSTPIDAEVLE

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain9.3e-0738.46Show/hide
Query:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYY
        +A  M  K +KYW     VLA+  ++DPRFKM+L+EF F +I+   +   ++ V D   EL   Y
Subjt:  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAAGAATGATTGCTAAGTTCGAAAAATATTGGAGCGTGATTCATGATGTATTGGCAATAACAACAATTTTAGATCCTAGGTTTAAGATGAGATTGATTGAATT
TTATTTCCCTCAAATCTATAGATCTCATTCTACTGTTGAAGTGCAACGTGTTAAAGATCTGTGCAAAGAATTGATTAATTATTATAAGTCAAGTTCAATTACAGAGGAAG
ACATTTCATGTTCTTCAAAGGAGGTGGATAGTTCTAGTCCTAGACTTAACAAATCTACTCCCATAGATGCCGAAGTGTTGGAGACTATTCTCCATGATCAAGATTCCGAT
GATGAGGACAGGAACGGGGAAGGCATTCCCAGGCCCTGCCCCACCTCGATCCATCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAAGAATGATTGCTAAGTTCGAAAAATATTGGAGCGTGATTCATGATGTATTGGCAATAACAACAATTTTAGATCCTAGGTTTAAGATGAGATTGATTGAATT
TTATTTCCCTCAAATCTATAGATCTCATTCTACTGTTGAAGTGCAACGTGTTAAAGATCTGTGCAAAGAATTGATTAATTATTATAAGTCAAGTTCAATTACAGAGGAAG
ACATTTCATGTTCTTCAAAGGAGGTGGATAGTTCTAGTCCTAGACTTAACAAATCTACTCCCATAGATGCCGAAGTGTTGGAGACTATTCTCCATGATCAAGATTCCGAT
GATGAGGACAGGAACGGGGAAGGCATTCCCAGGCCCTGCCCCACCTCGATCCATCTCTAA
Protein sequenceShow/hide protein sequence
MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKSTPIDAEVLETILHDQDSD
DEDRNGEGIPRPCPTSIHL