| GenBank top hits | e value | %identity | Alignment |
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| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 8.2e-242 | 86.44 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
MMATAAIIGLGA+KRLLNSSS Y DFTEKV Y ND+RLGQ+ S TKSVV+ SA+FSPSYPPSNRH+Q IKAVKE VDTP+SPTAEPWL N TIWEDE
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
Query: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
ETDLKCTVE LLLLQKSMLEKQWNLSFE+T STD PRGK E K PVTCSGVSARQRR+S KRKIQSK+ F A+PKISKQL+P +ISPELL NRL+GYVKG
Subjt: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
LVSEE+L H+EVVRLSKKIKVGLA+EE KTRLKERL CEPSE+QLAISL+ISR ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKV+LQEKGITPS+DRIAESLNMSKKKVKNAT+A SKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
Query: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
AFPSLNGLPGETHH YIADN LENNPWHGTDTW LK EVNKLI+MTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AK R
Subjt: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 9.3e-246 | 88.43 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQG-IKAVKERVDTPASPTAEPWLQN-TIWED
MMAT AIIGLGA+KRLLNSSS Y DFTEK+ YANDYRLGQ+ SPTKSVV+ SSANFSPSYP SNRH Q IKAVKE V+TP+SPTAEPWL N TIWED
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQG-IKAVKERVDTPASPTAEPWLQN-TIWED
Query: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
EETDLKCTVE LLLLQKSMLEKQWNLSFE+T STD+PR K K PVTCSGVSARQRR+S KRKIQSK+ F A+PKISKQLRP TISPELL NRLKGYVK
Subjt: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
Query: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
GL+SEELLSHAEVVRLSKKIKVGLA+EE KTRLKERLGCEPSEDQLAISLKISR ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGG
Subjt: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKV+LQEKGITPSLDRIAESLNMSKKKVKNAT+A SKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
Query: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
EAFPSLNGLPGETHH YIADN LENNPWHGTDTWILKAEVNKLI+MTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AKT
Subjt: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 1.8e-244 | 87.82 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
MMATAAIIGLGA+KRLLNSSS Y DF EK+ YAND+RLGQS SPTKSVV+ SSANFSPS+P SNRH Q IKAVKE VDTP+SPT EPWLQN T WEDE
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
Query: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
E DLKCTVE LLLLQKSMLEKQWNLSFE+T TD RG+ + K PVTCSGVSARQRR+S KRKIQSKN F +PKISKQLR +TISPELL RLKGYVKG
Subjt: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
LVSEELLSHAEVVRLSKKIKVGLA+EERKTRLKERLGCEPSEDQLAISLKISR ELRSR IECSLA+EKLAMSNVRLVMSIAQRY++MGAEM DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKVRLQEKGITPSLDRIAESLNMSKKKVKNAT+A SKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
Query: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
AFPSLNGLPGETHH YIADN LEN+PWHGTDTWILKAEVNKLI+MTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AKTR
Subjt: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 7.4e-243 | 86.84 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
MMATAAIIGLGA+KRLLNSSS Y DFTEKV Y ND+RLGQ+ S TKSVV+ SA+FSPSYPPSNRH+Q IKAVKE VDTP+SPTAEPWL N TIWEDE
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
Query: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
ETDLKCTVE LLLLQKSMLEKQWNLSFE+T STDVPRGK E K PVTCSGVSARQRR+S KRKIQSK+ F A+PKISKQL+P +ISPELL NRL+GYVKG
Subjt: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
LVSEE+L H+EVVRLSKKIKVGLA+EE KTRLKERL CEPSE+QLAISL+ISR ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKV+LQEKGITPS+DRIAESLNMSKKKVKNAT+A SKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
Query: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
AFPSLNGLPGETHH YIADN LENNPWHGTDTWILK EVNKLI+MTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AK R
Subjt: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 4.5e-248 | 89.22 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYA-NDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWED
MMATAAIIGLGA+KRLLNSSS Y DFTEK+ Y ND+RLGQ+ SPTKSVV+ SSANFSPSYP SNRH Q IKAVKE VDTP+SPTAEPWL N TIWED
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYA-NDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWED
Query: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
EE DLKCTVE LLLLQKSMLEKQWNLSFE+T STD PRGK E K PVTCSGVSARQRR+S KRKIQSK+ F A+PKISKQLRP TISPELL NRLKGYVK
Subjt: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
Query: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
GL+SEELLSHAEVVRLSKKIKVGLA+EERKTRLKERLGCEPSEDQLAISLKISR ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGG
Subjt: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKVRLQEKGITPSLDRIAESLNMSKKKVKNAT+A SKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
Query: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
EAFPSLNGLPGETHH YIADN LENNPWHGTDTWILKAEVNKLI+MTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AKT
Subjt: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 4.5e-246 | 88.43 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQG-IKAVKERVDTPASPTAEPWLQN-TIWED
MMAT AIIGLGA+KRLLNSSS Y DFTEK+ YANDYRLGQ+ SPTKSVV+ SSANFSPSYP SNRH Q IKAVKE V+TP+SPTAEPWL N TIWED
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQG-IKAVKERVDTPASPTAEPWLQN-TIWED
Query: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
EETDLKCTVE LLLLQKSMLEKQWNLSFE+T STD+PR K K PVTCSGVSARQRR+S KRKIQSK+ F A+PKISKQLRP TISPELL NRLKGYVK
Subjt: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
Query: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
GL+SEELLSHAEVVRLSKKIKVGLA+EE KTRLKERLGCEPSEDQLAISLKISR ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGG
Subjt: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKV+LQEKGITPSLDRIAESLNMSKKKVKNAT+A SKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
Query: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
EAFPSLNGLPGETHH YIADN LENNPWHGTDTWILKAEVNKLI+MTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AKT
Subjt: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 4.5e-246 | 88.43 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQG-IKAVKERVDTPASPTAEPWLQN-TIWED
MMAT AIIGLGA+KRLLNSSS Y DFTEK+ YANDYRLGQ+ SPTKSVV+ SSANFSPSYP SNRH Q IKAVKE V+TP+SPTAEPWL N TIWED
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQG-IKAVKERVDTPASPTAEPWLQN-TIWED
Query: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
EETDLKCTVE LLLLQKSMLEKQWNLSFE+T STD+PR K K PVTCSGVSARQRR+S KRKIQSK+ F A+PKISKQLRP TISPELL NRLKGYVK
Subjt: EETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVK
Query: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
GL+SEELLSHAEVVRLSKKIKVGLA+EE KTRLKERLGCEPSEDQLAISLKISR ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGG
Subjt: GLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKV+LQEKGITPSLDRIAESLNMSKKKVKNAT+A SKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDR
Query: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
EAFPSLNGLPGETHH YIADN LENNPWHGTDTWILKAEVNKLI+MTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AKT
Subjt: EAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 8.5e-245 | 87.82 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
MMATAAIIGLGA+KRLLNSSS Y DF EK+ YAND+RLGQS SPTKSVV+ SSANFSPS+P SNRH Q IKAVKE VDTP+SPT EPWLQN T WEDE
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
Query: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
E DLKCTVE LLLLQKSMLEKQWNLSFE+T TD RG+ + K PVTCSGVSARQRR+S KRKIQSKN F +PKISKQLR +TISPELL RLKGYVKG
Subjt: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
LVSEELLSHAEVVRLSKKIKVGLA+EERKTRLKERLGCEPSEDQLAISLKISR ELRSR IECSLA+EKLAMSNVRLVMSIAQRY++MGAEM DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKVRLQEKGITPSLDRIAESLNMSKKKVKNAT+A SKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
Query: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
AFPSLNGLPGETHH YIADN LEN+PWHGTDTWILKAEVNKLI+MTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AKTR
Subjt: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 1.3e-240 | 86.05 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
MMATAAIIGLGA+KRLLNSSS Y DFTEKV Y ND+RLGQ+ S TKSVV+ SA+FSPSYPPSNRH+Q IKAVKE VDTP+SPTAEPWL N TIWEDE
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
Query: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
ETDLKCTVE LLLLQKSMLEKQWNLSFE+T STDVPRGK E K PVTCSGVSARQRR++ KRKIQSK+ F A+PKISKQ +P +ISPELL NRL+GYVKG
Subjt: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
LVSEE+L H+EVVRLSKKIKVGLA+EE KTRLKERL CEPSE+QLAISL+IS ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKV+LQEKGITPS+DRIAESLNMSKKKVKNAT+A SKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
Query: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
AFPSLNGLPGETHH YIADN LENNPWHGTDTW LK EVNKLI+MTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AK R
Subjt: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 5.7e-241 | 86.05 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
MMATAAIIGLGA+KRLLNSSS Y DFTEKV Y ND+RLGQ+ S TK VV+ SA+FSPSY PSNRH+Q IKAVKE VDTP+SPTAEPWL N TIWEDE
Subjt: MMATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQN-TIWEDE
Query: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
ETDLKCTVE LLLLQKSMLEKQWNLSFE+T STD PRGK E K PVTCSGVSARQRR+S KRKIQSK+ F A+PKISKQL+P ISPELL NRL+GYVKG
Subjt: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
LVSEE+L H+EVVRLSKKIKVGLA+EE KTRLKERL C+PSE+QLAISL+ISR ELRSR +ECSLAREKLAMSNVRLVMSIAQRY++MGAEM DLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR LVENSRTLRLPTHLH R+GLIR AKV+LQEKGITPS+DRIAESLNMSKKKVKNAT+A SKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDRE
Query: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
AFPSLNGLPGETHH YIADN LENNPWHGTDTWILK EVNKLI+MTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKK AK R
Subjt: AFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 7.9e-38 | 32.36 | Show/hide |
Query: MENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKI---SKQLRPTTISPELLHNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLAIEERKTRLKER
+E + V+ + S RQ +R + + P + S + ++ E+ HN Y++ S +LL+ E LS I+ L +E +T L ER
Subjt: MENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKI---SKQLRPTTISPELLHNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLAIEERKTRLKER
Query: LGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLV
G +P+ Q A + + + LR R +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V + L
Subjt: LGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLV
Query: ENSRTLRLPTHLHGRIGLIRKAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWI
+ SR +RLP H+ +++A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD + D I
Subjt: ENSRTLRLPTHLHGRIGLIRKAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWI
Query: ---LKAEVNKLISMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTRKMEAMLL
++ +++K++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: ---LKAEVNKLISMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTRKMEAMLL
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| O24629 RNA polymerase sigma factor sigA | 5.1e-178 | 64.74 | Show/hide |
Query: MATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQNTIWEDEET
MATAA+IGL KRLL+SS + D TEK ND+ Q + TKS + ++N+SPS+P SNRH Q KA+KE VD + T +PWL N D+E
Subjt: MATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQNTIWEDEET
Query: DLKC---------TVEPLLLLQKSMLEKQWNLSFEETASTDVP-RGKMENK--APVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELL
+ +C +VE +LLLQKSMLEK WNLSFE+ S++ P +G + K +TCSG+SARQRR+ K+K + +S
Subjt: DLKC---------TVEPLLLLQKSMLEKQWNLSFEETASTDVP-RGKMENK--APVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELL
Query: HNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL +++ K+RLK+RLGCEPS++QLA+SLKISR EL++ +EC LAREKLAMSNVRLVMSIAQRY+++GA
Subjt: HNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGA
Query: EMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQA
EM DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSR LV+NSRTLRLPTHLH R+GLIR AK+RLQEKGITPS+DRIAESLNMS+KKV+NAT+A
Subjt: EMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQA
Query: TSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
SKVFSLDR+AFPSLNGLPGETHH YIAD LENNPWHG D LK EV+KLIS TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVAL
Subjt: TSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
Query: EKLKKTAKTRKMEAMLLKH
EKLK A+ RKMEAM+LK+
Subjt: EKLKKTAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 3.0e-37 | 29.78 | Show/hide |
Query: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
+ DL+ +P + L ++E+ +L + D E P T + + +R+ QSK E I + Y++
Subjt: ETDLKCTVEPLLLLQKSMLEKQWNLSFEETASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELLHNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
+ LL E + L++KI L +E + RL E+L +P + + A ++++ R R A++K+ SN+RLV+SIA++Y + G DL+Q G
Subjt: LVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRK-AKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLD-
+GL+R EKFD KG+K STY WWIRQ ++R + + SRT+RLP HL+ I I+K K+ QE G P+ + IA + M+ +K++ ++ SL+
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRK-AKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLD-
Query: ---REAFPSLNGL---PGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALE
+E L GET ++ N +L+ ++ K++ +L RER+++RL +GLD+ T EEI + ++RER+RQ+ AL
Subjt: ---REAFPSLNGL---PGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLK
KL+
Subjt: KLK
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| P38023 RNA polymerase sigma factor SigA1 | 3.5e-38 | 34.85 | Show/hide |
Query: YVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLV
Y++ + LL E + L+++I LA+E + L E+L PS+ + A ++ E R R A++K+ SN+RLV+SIA++Y + G DL+
Subjt: YVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLV
Query: QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRK-AKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVF
Q G +GL+R EKFD KG+K STY WWIRQ ++R + + SRT+RLP HL+ I I+K K+ QE G P+ + IA + M+ +K++ ++
Subjt: QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRK-AKVRLQEKGITPSLDRIAESLNMSKKKVKNATQATSKVF
Query: SLD----REAFPSLNGL---PGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGL
SL+ +E L GET +A N +L+ ++ ++S TL RER+++RL +GLD+ T EEI + ++RER+RQ+
Subjt: SLD----REAFPSLNGL---PGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGL
Query: VALEKLK
AL KL+
Subjt: VALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 3.2e-124 | 49.34 | Show/hide |
Query: MMATAAIIGLGASKRLLNSSSCYFD-FTEKVSYANDYRLG----------QSPASPTKSVVMVTSSANFSPSYPPSNR---------HLQGIKAVKERVD
M AT A+IGL A RLL++S D +KVS G S A P + +T+ A P R H A+
Subjt: MMATAAIIGLGASKRLLNSSSCYFD-FTEKVSYANDYRLG----------QSPASPTKSVVMVTSSANFSPSYPPSNR---------HLQGIKAVKERVD
Query: TPASPTAEPWLQNTIWEDEETDLKCTVEPLLLLQKSMLEKQWNLSFEE--------TASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAE
P PT P + DL+ ++E ++LLQ+SMLEKQW L F++ A D K V S VSARQRR+S +R+ ++KN
Subjt: TPASPTAEPWLQNTIWEDEETDLKCTVEPLLLLQKSMLEKQWNLSFEE--------TASTDVPRGKMENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAE
Query: PKISKQLRPTTISPELLHNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMS
+SPEL+ +R + Y++G VS+ELL+H +VV LS KIK G+ +++++++LKE+LG EPS QLA SLKIS ELRSR E LARE L MS
Subjt: PKISKQLRPTTISPELLHNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMS
Query: NVRLVMSIAQRYNHMGAEMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRI
N+RLV+SIAQ+Y+++G E+ DL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSR L ENS+T RLPT+LH R+ IR AK L+++GI P+++ I
Subjt: NVRLVMSIAQRYNHMGAEMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRI
Query: AESLNMSKKKVKNATQATSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISK
A SLN+S+KKV NAT+A +KV SLD++AFPSLNGLPGET H YI D ++ N+PWHG + W LK EVNKL++ TL +RER+IIRLYHG+ +C TWE+IS+
Subjt: AESLNMSKKKVKNATQATSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISK
Query: RIGLSRERVRQVGLVALEKLKKTAKTRKMEAML
+ GLSRERVRQVGL+A+EKLK A+ + +EA+L
Subjt: RIGLSRERVRQVGLVALEKLKKTAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 5.6e-39 | 32.36 | Show/hide |
Query: MENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKI---SKQLRPTTISPELLHNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLAIEERKTRLKER
+E + V+ + S RQ +R + + P + S + ++ E+ HN Y++ S +LL+ E LS I+ L +E +T L ER
Subjt: MENKAPVTCSGVSARQRRVSLKRKIQSKNAFNAEPKI---SKQLRPTTISPELLHNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLAIEERKTRLKER
Query: LGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLV
G +P+ Q A + + + LR R +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V + L
Subjt: LGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLV
Query: ENSRTLRLPTHLHGRIGLIRKAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWI
+ SR +RLP H+ +++A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD + D I
Subjt: ENSRTLRLPTHLHGRIGLIRKAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATQATSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWI
Query: ---LKAEVNKLISMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTRKMEAMLL
++ +++K++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: ---LKAEVNKLISMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKTAKTRKMEAMLL
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| AT1G64860.1 sigma factor A | 3.6e-179 | 64.74 | Show/hide |
Query: MATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQNTIWEDEET
MATAA+IGL KRLL+SS + D TEK ND+ Q + TKS + ++N+SPS+P SNRH Q KA+KE VD + T +PWL N D+E
Subjt: MATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQNTIWEDEET
Query: DLKC---------TVEPLLLLQKSMLEKQWNLSFEETASTDVP-RGKMENK--APVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELL
+ +C +VE +LLLQKSMLEK WNLSFE+ S++ P +G + K +TCSG+SARQRR+ K+K + +S
Subjt: DLKC---------TVEPLLLLQKSMLEKQWNLSFEETASTDVP-RGKMENK--APVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELL
Query: HNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL +++ K+RLK+RLGCEPS++QLA+SLKISR EL++ +EC LAREKLAMSNVRLVMSIAQRY+++GA
Subjt: HNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGA
Query: EMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQA
EM DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSR LV+NSRTLRLPTHLH R+GLIR AK+RLQEKGITPS+DRIAESLNMS+KKV+NAT+A
Subjt: EMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQA
Query: TSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
SKVFSLDR+AFPSLNGLPGETHH YIAD LENNPWHG D LK EV+KLIS TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVAL
Subjt: TSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
Query: EKLKKTAKTRKMEAMLLKH
EKLK A+ RKMEAM+LK+
Subjt: EKLKKTAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 5.1e-165 | 63.51 | Show/hide |
Query: MATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQNTIWEDEET
MATAA+IGL KRLL+SS + D TEK ND+ Q + TKS + ++N+SPS+P SNRH Q KA+KE VD + T +PWL N D+E
Subjt: MATAAIIGLGASKRLLNSSSCYFDFTEKVSYANDYRLGQSPASPTKSVVMVTSSANFSPSYPPSNRHLQGIKAVKERVDTPASPTAEPWLQNTIWEDEET
Query: DLKC---------TVEPLLLLQKSMLEKQWNLSFEETASTDVP-RGKMENK--APVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELL
+ +C +VE +LLLQKSMLEK WNLSFE+ S++ P +G + K +TCSG+SARQRR+ K+K + +S
Subjt: DLKC---------TVEPLLLLQKSMLEKQWNLSFEETASTDVP-RGKMENK--APVTCSGVSARQRRVSLKRKIQSKNAFNAEPKISKQLRPTTISPELL
Query: HNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL +++ K+RLK+RLGCEPS++QLA+SLKISR EL++ +EC LAREKLAMSNVRLVMSIAQRY+++GA
Subjt: HNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGA
Query: EMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQA
EM DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSR LV+NSRTLRLPTHLH R+GLIR AK+RLQEKGITPS+DRIAESLNMS+KKV+NAT+A
Subjt: EMVDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEKGITPSLDRIAESLNMSKKKVKNATQA
Query: TSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRI
SKVFSLDR+AFPSLNGLPGETHH YIAD LENNPWHG D LK EV+KLIS TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: TSKVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.1e-34 | 31.63 | Show/hide |
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMV
L+ ++ G +++LL+ E L I+ L +E+ KT+L+ + GCEP+ + A ++ IS L+S +REKL +N+RLV+ IA++Y + G
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELRSREIECSLAREKLAMSNVRLVMSIAQRYNHMGAEMV
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATQATS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + + + +NSRT+RLP +++ +G + +A K +QE PS + +A + +S +K+ T
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATQATS
Query: KVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+++ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKTAKTRKMEA
+LK+ + + A
Subjt: KLKKTAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 3.5e-33 | 34.98 | Show/hide |
Query: VKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELR--SREIEC--SLAREKLAMSNVRLVMSIAQRYNHMGAEMV
V G LS E V+L +K G +E T ++E + +++ L R + + + EI C AREK+ RLV+SIA Y G +
Subjt: VKGLVSEELLSHAEVVRLSKKIKVGLAIEERKTRLKERLGCEPSEDQLAISLKISRVELR--SREIEC--SLAREKLAMSNVRLVMSIAQRYNHMGAEMV
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATQATS
DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + R + SR ++LP + + +A L K PS + IAE LN++ V+ A + +
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRVLVENSRTLRLPTHLHGRIGLIRKAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATQATS
Query: KVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALE
SLDR A + G I E P +K E+ +L+ +L RE ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+
Subjt: KVFSLDREAFPSLNGLPGETHHCYIADNHLENNPWHGTDTWILKAEVNKLISMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALE
Query: KLK
KL+
Subjt: KLK
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