; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000366 (gene) of Chayote v1 genome

Gene IDSed0000366
OrganismSechium edule (Chayote v1)
DescriptionPol protein
Genome locationLG07:32852978..32854026
RNA-Seq ExpressionSed0000366
SyntenySed0000366
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041424.1 pol protein [Cucumis melo var. makuwa]1.5e-12162.43Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  V               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPM+GVLRF +RGKLSP FVGPFEILER+G VAYRLALPP+LSAVH VFHVSMLR+YVPDPSH+VD EPL+++E+LS+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YP+LF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

KAA0043401.1 pol protein [Cucumis melo var. makuwa]9.0e-12261.85Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYG+ CRSPV    +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFE+G  VFLKVAPM+GVLRF +RGKLSP FVGPFEILERIG VAYRLALPP+LSAVH VFH+SMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

KAA0051522.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.3e-12462.72Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT R F+ IWV+V+RLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                R LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I M PFEALYGK CRSPV+   +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPMRGVLRF +RGKLSPHFVGPFE+LERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PVG
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LRNREI  VK+ WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

KAA0053234.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.0e-12262.43Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT + F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPMRGVLRF +RGKLS HFVGPFEILERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LR++EI LVKV WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

KAA0060848.1 pol protein [Cucumis melo var. makuwa]5.3e-12262.72Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPMRGVLRF KRGKLSP FVGPFEILERIG VAYRLALPP+L+  H VFHVSMLR+YVPDPSH+VD+EPL+++E++S+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        ILA E K LRN+EI LVKV WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

TrEMBL top hitse value%identityAlignment
A0A5A7TDB5 Pol protein7.4e-12262.43Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  V               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPM+GVLRF +RGKLSP FVGPFEILER+G VAYRLALPP+LSAVH VFHVSMLR+YVPDPSH+VD EPL+++E+LS+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YP+LF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

A0A5A7TPA9 Pol protein4.4e-12261.85Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYG+ CRSPV    +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFE+G  VFLKVAPM+GVLRF +RGKLSP FVGPFEILERIG VAYRLALPP+LSAVH VFH+SMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

A0A5A7U6Z4 Ty3-gypsy retrotransposon protein2.1e-12462.72Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT R F+ IWV+V+RLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                R LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I M PFEALYGK CRSPV+   +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPMRGVLRF +RGKLSPHFVGPFE+LERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PVG
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LRNREI  VK+ WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

A0A5A7UDB1 Reverse transcriptase4.4e-12262.43Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI+GLPRT + F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPMRGVLRF +RGKLS HFVGPFEILERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        +LA E K LR++EI LVKV WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

A0A5A7UZZ4 Pol protein2.6e-12262.72Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER
        MDFI GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP                + LQ  +GT   FST FHPQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP----------------RALQKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR
        +NQ+LEDMLRAC L+FPGSWD +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  +               +YADVR
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV---------------AYADVR

Query:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
        R+DLEFEVG  VFLKVAPMRGVLRF KRGKLSP FVGPFEILERIG VAYRLALPP+L+  H VFHVSMLR+YVPDPSH+VD+EPL+++E++S+ E+PV 
Subjt:  RRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG

Query:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ
        ILA E K LRN+EI LVKV WR+  +EEATWERED+MR +YPELF+
Subjt:  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein7.9e-2831.87Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER
        MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +                         FS  + PQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR
         NQ +E +LR      P +W  ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V  +L   N  +  Y D++ +
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR

Query:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY
        ++ EF+ G  V +K     G L   K  KL+P F GPF +L++ G   Y L LP ++  +  S FHVS L +Y
Subjt:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY

P0CT35 Transposon Tf2-2 polyprotein7.9e-2831.87Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER
        MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +                         FS  + PQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR
         NQ +E +LR      P +W  ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V  +L   N  +  Y D++ +
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR

Query:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY
        ++ EF+ G  V +K     G L   K  KL+P F GPF +L++ G   Y L LP ++  +  S FHVS L +Y
Subjt:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY

P0CT36 Transposon Tf2-3 polyprotein7.9e-2831.87Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER
        MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +                         FS  + PQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR
         NQ +E +LR      P +W  ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V  +L   N  +  Y D++ +
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR

Query:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY
        ++ EF+ G  V +K     G L   K  KL+P F GPF +L++ G   Y L LP ++  +  S FHVS L +Y
Subjt:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY

P0CT41 Transposon Tf2-12 polyprotein7.9e-2831.87Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER
        MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +                         FS  + PQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR
         NQ +E +LR      P +W  ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V  +L   N  +  Y D++ +
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR

Query:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY
        ++ EF+ G  V +K     G L   K  KL+P F GPF +L++ G   Y L LP ++  +  S FHVS L +Y
Subjt:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY

Q9UR07 Transposon Tf2-11 polyprotein7.9e-2831.87Show/hide
Query:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER
        MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +                         FS  + PQTDGQTER
Subjt:  MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL----------------QKGLGTECSFSTTFHPQTDGQTER

Query:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR
         NQ +E +LR      P +W  ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V  +L   N  +  Y D++ +
Subjt:  VNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WVPSYLRLTN-GVVAYADVRRR

Query:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY
        ++ EF+ G  V +K     G L   K  KL+P F GPF +L++ G   Y L LP ++  +  S FHVS L +Y
Subjt:  DL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTTATTTCTGGCTTGCCGAGGACTCCGAGGAAGTTCTCTCAGATTTGGGTGATAGTCGATCGATTGACTAAGAGCGCACACTTCATTCCCGGTAGAGACACTTA
TACCGTGGAACAGTGGGCGCAGTTGTTTTTGGAGCAGATCATTCGCTATCACGGTGTGCCTAGAGCGCTCCAGAAGGGTTTAGGCACTGAGTGCAGCTTCAGCACAACTT
TTCACCCTCAGACCGATGGACAGACTGAGAGGGTGAACCAGATTCTCGAAGATATGTTGAGGGCTTGTGTGTTGGATTTCCCGGGCAGTTGGGACCAGTATCTGTATCTG
ATGGAGTTTGCATATAACAACGATTATCGATCGGCGATCGAGATGGCTCCATTCGAGGCTTTGTATGGCAAGCGTTGCCGATCTCCCGTGTTCGGGAAGAGGTTGGTGAT
AGGCGAGTTTTGGGTCCCGAGTTATCTGCGCTTGACCAATGGTGTCGTCGCTTATGCCGATGTTCGGCGTCGGGATTTGGAATTTGAGGTTGGTCAACATGTTTTCTTGA
AGGTCGCACCGATGCGAGGTGTTTTGAGGTTTGGCAAGCGTGGAAAGCTGAGTCCCCATTTTGTTGGCCCGTTTGAGATTCTGGAGAGGATCGGCAAGGTTGCTTATAGA
TTAGCCTTGCCTCCGACATTGTCGGCAGTGCACAGTGTATTTCATGTATCGATGTTGAGGCAGTACGTGCCGGACCCATCGCACATTGTAGATTTTGAGCCCTTGCAGCT
GAATGAGGATTTGAGCTTTGAGGAAAAGCCAGTGGGGATTCTTGCTTTTGAGACAAAGGCACTGCGAAATCGTGAAATCCGGCTGGTAAAGGTTCAGTGGAGGAGTCAGA
GTTTAGAGGAAGCCACTTGGGAGCGGGAGGATGAGATGAGATTGCAGTATCCCGAGCTGTTTCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTTATTTCTGGCTTGCCGAGGACTCCGAGGAAGTTCTCTCAGATTTGGGTGATAGTCGATCGATTGACTAAGAGCGCACACTTCATTCCCGGTAGAGACACTTA
TACCGTGGAACAGTGGGCGCAGTTGTTTTTGGAGCAGATCATTCGCTATCACGGTGTGCCTAGAGCGCTCCAGAAGGGTTTAGGCACTGAGTGCAGCTTCAGCACAACTT
TTCACCCTCAGACCGATGGACAGACTGAGAGGGTGAACCAGATTCTCGAAGATATGTTGAGGGCTTGTGTGTTGGATTTCCCGGGCAGTTGGGACCAGTATCTGTATCTG
ATGGAGTTTGCATATAACAACGATTATCGATCGGCGATCGAGATGGCTCCATTCGAGGCTTTGTATGGCAAGCGTTGCCGATCTCCCGTGTTCGGGAAGAGGTTGGTGAT
AGGCGAGTTTTGGGTCCCGAGTTATCTGCGCTTGACCAATGGTGTCGTCGCTTATGCCGATGTTCGGCGTCGGGATTTGGAATTTGAGGTTGGTCAACATGTTTTCTTGA
AGGTCGCACCGATGCGAGGTGTTTTGAGGTTTGGCAAGCGTGGAAAGCTGAGTCCCCATTTTGTTGGCCCGTTTGAGATTCTGGAGAGGATCGGCAAGGTTGCTTATAGA
TTAGCCTTGCCTCCGACATTGTCGGCAGTGCACAGTGTATTTCATGTATCGATGTTGAGGCAGTACGTGCCGGACCCATCGCACATTGTAGATTTTGAGCCCTTGCAGCT
GAATGAGGATTTGAGCTTTGAGGAAAAGCCAGTGGGGATTCTTGCTTTTGAGACAAAGGCACTGCGAAATCGTGAAATCCGGCTGGTAAAGGTTCAGTGGAGGAGTCAGA
GTTTAGAGGAAGCCACTTGGGAGCGGGAGGATGAGATGAGATTGCAGTATCCCGAGCTGTTTCAATCTTAA
Protein sequenceShow/hide protein sequence
MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSWDQYLYL
MEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVVAYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYR
LALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQS