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Sed0000457 (gene) of Chayote v1 genome

Gene IDSed0000457
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:35154662..35155259
RNA-Seq ExpressionSed0000457
SyntenySed0000457
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578478.1 hypothetical protein SDJN03_22926, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1565.43Show/hide
Query:  MANLFKPTNLFFAFAIILFLSVSSSSARVLHDQSPS-AVPEFKPDIPA---DHTAALLLGFLPKGVIPPSGPSRKTNDLHT
        MA LFK   LFF FA+ILF+S SSSSAR+L DQS S AVPE K DIPA        L+LGFLPKG IPPSGPS+ TND +T
Subjt:  MANLFKPTNLFFAFAIILFLSVSSSSARVLHDQSPS-AVPEFKPDIPA---DHTAALLLGFLPKGVIPPSGPSRKTNDLHT

KAG6602588.1 hypothetical protein SDJN03_07821, partial [Cucurbita argyrosperma subsp. sororia]6.4e-1358.62Show/hide
Query:  MANLFKPTNLFFAFAIILFLSV-SSSSARVLHD--QSPSAVPEFKPDIPADHT-------AALLLGFLPKGVIPPSGPSRKTNDLHT
        MANLFK +      A+IL LSV SSSSAR+L D   SP+A+P+ K D PADHT        ALLLGFLPKG IPPSGPS+ TN+L++
Subjt:  MANLFKPTNLFFAFAIILFLSV-SSSSARVLHD--QSPSAVPEFKPDIPADHT-------AALLLGFLPKGVIPPSGPSRKTNDLHT

KGN45830.1 hypothetical protein Csa_005505 [Cucumis sativus]6.0e-1159.3Show/hide
Query:  MANLFKPTNL-FFAFAIILFLSVSSSSARVLHDQSPSAVPEFKPDIPADHTA-------ALLLGFLPK-GVIPPSGPSRKTNDLHT
        MANLFK   L FF F +IL +SVSSSSAR+L  QS S  P  K DIPAD  A       +LLLGFLPK G IPPSGPS+ TN+ +T
Subjt:  MANLFKPTNL-FFAFAIILFLSVSSSSARVLHDQSPSAVPEFKPDIPADHTA-------ALLLGFLPK-GVIPPSGPSRKTNDLHT

TrEMBL top hitse value%identityAlignment
A0A0A0K7U2 Uncharacterized protein2.9e-1159.3Show/hide
Query:  MANLFKPTNL-FFAFAIILFLSVSSSSARVLHDQSPSAVPEFKPDIPADHTA-------ALLLGFLPK-GVIPPSGPSRKTNDLHT
        MANLFK   L FF F +IL +SVSSSSAR+L  QS S  P  K DIPAD  A       +LLLGFLPK G IPPSGPS+ TN+ +T
Subjt:  MANLFKPTNL-FFAFAIILFLSVSSSSARVLHDQSPSAVPEFKPDIPADHTA-------ALLLGFLPK-GVIPPSGPSRKTNDLHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATCTCTTCAAACCCACAAATCTCTTCTTTGCTTTTGCCATAATTCTTTTCCTCTCTGTTTCATCTTCATCTGCCAGAGTTTTGCACGATCAATCTCCTTCCGC
CGTGCCGGAGTTCAAGCCTGACATTCCGGCGGATCATACGGCGGCTCTGCTTCTTGGGTTTCTGCCAAAGGGGGTAATTCCGCCGTCGGGGCCGAGCAGAAAGACCAACG
ATTTGCACACCTAG
mRNA sequenceShow/hide mRNA sequence
TTTCAACCAAAATCACCTTCTTTTTAACTTCATTCACACACACTTTAAAAATCCCCCAACCAAATCAAAACCATTTCCACATTCAATTTCACATCTCCCATTTCTTCCTT
CCTCTCAAAGCTTCCACTTTTATTCTGTTCTTCAATGGCTAATCTCTTCAAACCCACAAATCTCTTCTTTGCTTTTGCCATAATTCTTTTCCTCTCTGTTTCATCTTCAT
CTGCCAGAGTTTTGCACGATCAATCTCCTTCCGCCGTGCCGGAGTTCAAGCCTGACATTCCGGCGGATCATACGGCGGCTCTGCTTCTTGGGTTTCTGCCAAAGGGGGTA
ATTCCGCCGTCGGGGCCGAGCAGAAAGACCAACGATTTGCACACCTAGAAATTTTTTTGTAACTCTTTTGGTTTTGTGTAATTGTTAATTATTTGTTTTGTATAGTTTAA
TGACTCATTAAAAGGGTGGGGTAGATTTAATTCATTCATTGTTTCATTATTATGCAATTATTTGTATTGTTATTCATCATTGGATTATTATGTTTTTAGGACAAAACTTT
GGATCCCTGGAACTGAGTTTCAATTAAAAGAACAACATTTGTTTGATC
Protein sequenceShow/hide protein sequence
MANLFKPTNLFFAFAIILFLSVSSSSARVLHDQSPSAVPEFKPDIPADHTAALLLGFLPKGVIPPSGPSRKTNDLHT