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Sed0000482 (gene) of Chayote v1 genome

Gene IDSed0000482
OrganismSechium edule (Chayote v1)
Descriptionberberine bridge enzyme-like 18
Genome locationLG05:35130012..35131555
RNA-Seq ExpressionSed0000482
SyntenySed0000482
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR016166 - FAD-binding domain, PCMH-type
IPR016169 - FAD-binding, type PCMH, subdomain 2
IPR036318 - FAD-binding, type PCMH-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445684.1 PREDICTED: tetrahydrocannabinolic acid synthase-like [Cucumis melo]3.9e-4387.25Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRK+GLAADNVIDA LVDANG+V DKESMGEDLFWAIRGGGGGSFGIVVAWK+KLVPVP TVT+CST R LEEDAIKLIH W YVGNKL EN+YLGIIL
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

XP_022927113.1 berberine bridge enzyme-like 28 [Cucurbita moschata]6.2e-4182.35Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRKYGLAADNV+DA LVDANGRVHD+ESMGEDLFWAIRGGGGGSFGIVVAWKVKLV VPA VT+CST R +E+DAIKLIH W YV N+L +NL+LGI+L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

XP_023001021.1 berberine bridge enzyme-like 18 [Cucurbita maxima]6.2e-4182.35Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRKYGLAADNV+DA LVDANGRVHD+ESMGEDLFWAIRGGGGGSFGIVVAWKVKLV VPA VT+CST R +E+DAIKLIH W YV N+L +NL+LGI+L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

XP_038895508.1 berberine bridge enzyme-like 28 [Benincasa hispida]4.3e-4285.29Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRK+GLAADNVIDA LVDANG+VHD+ESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVT CST R LE DAIKL+H W YV NKL ENL+LGI+L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

XP_038895543.1 berberine bridge enzyme-like 18 [Benincasa hispida]2.7e-4487.25Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRK+GLAADNVIDA LVDANG+VHD+ESMGEDLFWAIRGGGGGSFGIVVAWK+KLVPVPATVT+CST+R LEEDAIKL+H W YV NKL ENLYLGIIL
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

TrEMBL top hitse value%identityAlignment
A0A1S3BDA8 tetrahydrocannabinolic acid synthase-like1.9e-4387.25Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRK+GLAADNVIDA LVDANG+V DKESMGEDLFWAIRGGGGGSFGIVVAWK+KLVPVP TVT+CST R LEEDAIKLIH W YVGNKL EN+YLGIIL
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

A0A5A7TU57 Tetrahydrocannabinolic acid synthase-like1.9e-4387.25Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRK+GLAADNVIDA LVDANG+V DKESMGEDLFWAIRGGGGGSFGIVVAWK+KLVPVP TVT+CST R LEEDAIKLIH W YVGNKL EN+YLGIIL
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

A0A5D3C1A1 Tetrahydrocannabinolic acid synthase-like1.5e-4080.39Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRK+GLAADNVIDA LVDANG+VHD++SMGEDLFWAIRGGGGGSFGIVVAWK+KLV VPATVT+CST R L+ D IKL+H W YV NKL ENL+LGI+L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

A0A6J1EK38 berberine bridge enzyme-like 283.0e-4182.35Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRKYGLAADNV+DA LVDANGRVHD+ESMGEDLFWAIRGGGGGSFGIVVAWKVKLV VPA VT+CST R +E+DAIKLIH W YV N+L +NL+LGI+L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

A0A6J1KHF6 berberine bridge enzyme-like 183.0e-4182.35Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        MLRKYGLAADNV+DA LVDANGRVHD+ESMGEDLFWAIRGGGGGSFGIVVAWKVKLV VPA VT+CST R +E+DAIKLIH W YV N+L +NL+LGI+L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TG
        TG
Subjt:  TG

SwissProt top hitse value%identityAlignment
A0A2S1XB67 O-acetylstemmadenine oxidase3.6e-3158.33Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        +LRKYGLAADN+IDA +VDA GR+ D+ESMGEDLFWAIRGGGG SFG++V+WKVKLV VP  VTV    +  EE  + L+H W Y+ +KL E+L+L + +
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TGRISAPN
            S+ N
Subjt:  TGRISAPN

O64743 Berberine bridge enzyme-like 152.1e-3156.44Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        M+RK+GL ADNV+DA +VDANG++ D+ +MGED+FWAIRGGGGGSFG+++AWK+KLVPVPATVTV +  + LE+D  K+++ W  + +KL ++L++ +I+
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  T
        +
Subjt:  T

Q93ZA3 Berberine bridge enzyme-like 132.7e-3152.94Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        M+RK+GL ADNV+DA +VDA+G++ ++ +MGED+FWAIRGGGGGSFG+++AWK+KLVPVP  VTV +  R LE+D  KL++ W  V +KL E+L++ +I+
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TGRISAPNLLTKKKKEKKI
              P   T K KE+ I
Subjt:  TGRISAPNLLTKKKKEKKI

Q9FKV0 Berberine bridge enzyme-like 249.7e-2957.43Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDA-IKLIHHWLYVGNKLGENLYLGII
        ++RKYGLA DNV+D  +VDANG++ D+ +MGEDLFWAIRGGGG SFGIV+AWK+KLVPVP TVTV +  + LE+DA +K I  W  + +K+ E +++ ++
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDA-IKLIHHWLYVGNKLGENLYLGII

Query:  L
        L
Subjt:  L

Q9SA89 Berberine bridge enzyme-like 123.7e-2853.47Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        M+RK+GL  D+V+DAT+VDANG++HD++SM EDLFWAIRGGGGGSFG+V+A+KVKLV VP TVTV    + ++E+A+ +++ W +V  +    L++ ++L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  T
        +
Subjt:  T

Arabidopsis top hitse value%identityAlignment
AT1G30740.1 FAD-binding Berberine family protein2.6e-2953.47Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        M+RK+GL  D+V+DAT+VDANG++HD++SM EDLFWAIRGGGGGSFG+V+A+KVKLV VP TVTV    + ++E+A+ +++ W +V  +    L++ ++L
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  T
        +
Subjt:  T

AT1G30760.1 FAD-binding Berberine family protein1.9e-3252.94Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        M+RK+GL ADNV+DA +VDA+G++ ++ +MGED+FWAIRGGGGGSFG+++AWK+KLVPVP  VTV +  R LE+D  KL++ W  V +KL E+L++ +I+
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  TGRISAPNLLTKKKKEKKI
              P   T K KE+ I
Subjt:  TGRISAPNLLTKKKKEKKI

AT2G34790.1 FAD-binding Berberine family protein1.5e-3256.44Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL
        M+RK+GL ADNV+DA +VDANG++ D+ +MGED+FWAIRGGGGGSFG+++AWK+KLVPVPATVTV +  + LE+D  K+++ W  + +KL ++L++ +I+
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIIL

Query:  T
        +
Subjt:  T

AT5G44380.1 FAD-binding Berberine family protein6.9e-3057.43Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDA-IKLIHHWLYVGNKLGENLYLGII
        ++RKYGLA DNV+D  +VDANG++ D+ +MGEDLFWAIRGGGG SFGIV+AWK+KLVPVP TVTV +  + LE+DA +K I  W  + +K+ E +++ ++
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDA-IKLIHHWLYVGNKLGENLYLGII

Query:  L
        L
Subjt:  L

AT5G44440.1 FAD-binding Berberine family protein2.6e-2954.17Show/hide
Query:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYL
        +LRKYGLAADN+IDA +VDA+GR+ D+++MGED FWAIRGGGG SFG++++WKVKLV VP+T+TV   ++  +++A+++I  W Y  +K+ ++L++
Subjt:  MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGGAAATATGGGCTTGCGGCTGATAATGTAATAGATGCAACATTGGTGGATGCTAATGGGAGGGTTCATGATAAAGAGTCAATGGGGGAGGATTTGTTTTGGGC
GATCCGAGGCGGCGGCGGAGGGAGCTTCGGAATCGTTGTGGCTTGGAAGGTGAAGCTGGTTCCAGTTCCAGCGACTGTGACGGTCTGCTCAACAAAGAGAAAATTGGAGG
AAGATGCAATCAAGCTCATCCATCATTGGCTATATGTTGGAAACAAATTAGGCGAAAATCTATACCTTGGCATCATTTTGACTGGTCGAATCTCTGCTCCAAATTTGTTA
ACCAAAAAAAAGAAAGAAAAGAAAATCGAAGTCCCAAGGCATTTGCAAATTGAGCTAAACATGGTTGACTCAAGTTGTTGGGCTAATGGGCTTTTCAGTTCAGCGCACAA
TCAGACGAACGACAGTAAGAACGTAAATTCCGTACACCACAGCGAATCAACGAAACCAATTGCGACCGAGCGCGCGCGGAAGCTCCAGCACCAATCCAGTTATCCTCGCG
CTTGTACCGAGCCACCTGGAGGCTGGAGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGGAAATATGGGCTTGCGGCTGATAATGTAATAGATGCAACATTGGTGGATGCTAATGGGAGGGTTCATGATAAAGAGTCAATGGGGGAGGATTTGTTTTGGGC
GATCCGAGGCGGCGGCGGAGGGAGCTTCGGAATCGTTGTGGCTTGGAAGGTGAAGCTGGTTCCAGTTCCAGCGACTGTGACGGTCTGCTCAACAAAGAGAAAATTGGAGG
AAGATGCAATCAAGCTCATCCATCATTGGCTATATGTTGGAAACAAATTAGGCGAAAATCTATACCTTGGCATCATTTTGACTGGTCGAATCTCTGCTCCAAATTTGTTA
ACCAAAAAAAAGAAAGAAAAGAAAATCGAAGTCCCAAGGCATTTGCAAATTGAGCTAAACATGGTTGACTCAAGTTGTTGGGCTAATGGGCTTTTCAGTTCAGCGCACAA
TCAGACGAACGACAGTAAGAACGTAAATTCCGTACACCACAGCGAATCAACGAAACCAATTGCGACCGAGCGCGCGCGGAAGCTCCAGCACCAATCCAGTTATCCTCGCG
CTTGTACCGAGCCACCTGGAGGCTGGAGCTATTGA
Protein sequenceShow/hide protein sequence
MLRKYGLAADNVIDATLVDANGRVHDKESMGEDLFWAIRGGGGGSFGIVVAWKVKLVPVPATVTVCSTKRKLEEDAIKLIHHWLYVGNKLGENLYLGIILTGRISAPNLL
TKKKKEKKIEVPRHLQIELNMVDSSCWANGLFSSAHNQTNDSKNVNSVHHSESTKPIATERARKLQHQSSYPRACTEPPGGWSY