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Sed0000508 (gene) of Chayote v1 genome

Gene IDSed0000508
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis abundant protein group 8 protein
Genome locationLG01:18032397..18032889
RNA-Seq ExpressionSed0000508
SyntenySed0000508
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]1.9e-2267.03Show/hide
Query:  KEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI
        ++GQ Q M +    +EKA VE+LLPLESSPYVKYKDL++YK K YG EGH+EPKP     GGGTDAPTLSGSG+PEV+P  ID VT+QGLI
Subjt:  KEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI

KAG6608652.1 hypothetical protein SDJN03_01994, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2572.34Show/hide
Query:  MSNKEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI
        M   E   QQM+ +  E+EK SVEELLPLESSPYVKYKDL+DYK+K YG EGH+EPKP     GGGTDAPTLSGSGFPEV P +IDAVTRQGLI
Subjt:  MSNKEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]6.3e-2669.89Show/hide
Query:  EGQAQQMKEKLG--EQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLIP
        + Q Q     +G  E+EKASVEELLPLESSPYVKYKDL++YK + YG EGH+EPKP  G GGGGTDAPTLSG+GFPEVKP  ID  T QGLIP
Subjt:  EGQAQQMKEKLG--EQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLIP

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]5.9e-2468.42Show/hide
Query:  MSNKEGQAQQMKEKLGE-QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI
        MSN E + QQ ++ + E +EK SVEELLPLESSPYVKYKDL++YK K YG EGH+EPKP     GGGTDAPTLSGSGFPEVKP  ID VT  GL+
Subjt:  MSNKEGQAQQMKEKLGE-QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]1.2e-2469.47Show/hide
Query:  MSNKEGQAQQMKEKLGE-QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI
        MSN E + QQ ++ + E +EKASVEELLPLESSPYVKYKDL++YK K YG EGH+EPKP     GGGTDAPTLSGSGFPEVKP  ID VT  GL+
Subjt:  MSNKEGQAQQMKEKLGE-QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein7.8e-2272.73Show/hide
Query:  QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI
        +EKA VE+LLPLESSPYVKYKDL++YK K YG EGH+ PKP     GGGTDAPTLSGSG PEV+P  ID VT+QGLI
Subjt:  QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein9.2e-2367.03Show/hide
Query:  KEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI
        ++GQ Q M +    +EKA VE+LLPLESSPYVKYKDL++YK K YG EGH+EPKP     GGGTDAPTLSGSG+PEV+P  ID VT+QGLI
Subjt:  KEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI

A0A6J1C2A9 uncharacterized protein LOC1110076213.1e-2669.89Show/hide
Query:  EGQAQQMKEKLG--EQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLIP
        + Q Q     +G  E+EKASVEELLPLESSPYVKYKDL++YK + YG EGH+EPKP  G GGGGTDAPTLSG+GFPEVKP  ID  T QGLIP
Subjt:  EGQAQQMKEKLG--EQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLIP

A0A6J1FA12 uncharacterized protein LOC1114436392.9e-2468.42Show/hide
Query:  MSNKEGQAQQMKEKLGE-QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI
        MSN E + QQ ++ + E +EK SVEELLPLESSPYVKYKDL++YK K YG EGH+EPKP     GGGTDAPTLSGSGFPEVKP  ID VT  GL+
Subjt:  MSNKEGQAQQMKEKLGE-QEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLI

A0A7J7C4J8 Uncharacterized protein2.9e-1656.99Show/hide
Query:  MSNKEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGL
        MSN   Q  Q  E   EQ+K SV E LP+ESSPYVKY +L+DYK KAYGTEGH+   P   GGGGGTDAPT+SGSG  + K   +D   R G+
Subjt:  MSNKEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 64.9e-0843.33Show/hide
Query:  QMKEKLGEQEKASVE-ELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLS-----GSGFPEVKPVAIDAVTRQGL
        Q K    EQE   V+ + L    +PY+ Y +L+DYK K YG +GH EPK   G GGG TDAPT S     G G       + DA+ RQG+
Subjt:  QMKEKLGEQEKASVE-ELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLS-----GSGFPEVKPVAIDAVTRQGL

AT2G23110.2 Late embryogenesis abundant protein, group 64.9e-0843.33Show/hide
Query:  QMKEKLGEQEKASVE-ELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLS-----GSGFPEVKPVAIDAVTRQGL
        Q K    EQE   V+ + L    +PY+ Y +L+DYK K YG +GH EPK   G GGG TDAPT S     G G       + DA+ RQG+
Subjt:  QMKEKLGEQEKASVE-ELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLS-----GSGFPEVKPVAIDAVTRQGL

AT2G23120.1 Late embryogenesis abundant protein, group 62.7e-0656.45Show/hide
Query:  EKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSG
        EK  EQ K   +  LP + SPY+    L+DYK KAYG EGH EP P  G GGG TDAPT SG
Subjt:  EKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 66.5e-1351.39Show/hide
Query:  KASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQ
        K+  ++ LPLE+SPY KY+D++DYK  AYGT GH + KP H  GGG TDAPT SG    +  P AID+  ++
Subjt:  KASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAACAAGGAAGGGCAGGCGCAGCAAATGAAGGAAAAATTAGGAGAACAAGAGAAGGCTTCGGTGGAAGAATTGTTGCCATTGGAGAGCAGTCCGTACGTGAAATA
CAAAGACTTGGATGACTACAAAGACAAGGCCTATGGGACAGAGGGACATGTCGAGCCCAAGCCCGAACATGGCGGTGGCGGTGGCGGCACCGATGCACCCACCTTGTCCG
GCAGTGGCTTCCCGGAGGTCAAGCCCGTCGCCATTGACGCCGTCACCCGACAAGGCCTTATCCCCCATGATTAA
mRNA sequenceShow/hide mRNA sequence
GTGGAAAATGTCGAACAAGGAAGGGCAGGCGCAGCAAATGAAGGAAAAATTAGGAGAACAAGAGAAGGCTTCGGTGGAAGAATTGTTGCCATTGGAGAGCAGTCCGTACG
TGAAATACAAAGACTTGGATGACTACAAAGACAAGGCCTATGGGACAGAGGGACATGTCGAGCCCAAGCCCGAACATGGCGGTGGCGGTGGCGGCACCGATGCACCCACC
TTGTCCGGCAGTGGCTTCCCGGAGGTCAAGCCCGTCGCCATTGACGCCGTCACCCGACAAGGCCTTATCCCCCATGATTAAATTAATCTCATCCTTCTTAATTATGTATT
CTCTAAATTTGCATCTCTTTTTGGCTTCCATTCATTCAACAATCGTGTATTCTAAATTTTGATCTCAACCACAAGTAAAGATATATTTTTTTATCTTTTTGATATTGGAA
AACTGTAATCGGTGAGCTGTTATCACAAAATAATTACGAATGTAGTCGATTTT
Protein sequenceShow/hide protein sequence
MSNKEGQAQQMKEKLGEQEKASVEELLPLESSPYVKYKDLDDYKDKAYGTEGHVEPKPEHGGGGGGTDAPTLSGSGFPEVKPVAIDAVTRQGLIPHD