; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000512 (gene) of Chayote v1 genome

Gene IDSed0000512
OrganismSechium edule (Chayote v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationLG05:10890078..10891668
RNA-Seq ExpressionSed0000512
SyntenySed0000512
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7057084.1 unnamed protein product [Microthlaspi erraticum]1.3e-2959.68Show/hide
Query:  LRHSSSPGRCDDAGSVLEGHLSLPDYSKSH-------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAI
        L H +  G   +   +L  HLSLP  S ++       + ++L  SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQE VPN+DKQ NTS+MLDLA+
Subjt:  LRHSSSPGRCDDAGSVLEGHLSLPDYSKSH-------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAI

Query:  EYIKDLQKQVQALSNDHKNCSCDK
        +YIKDLQ+Q Q LS +  NC C+K
Subjt:  EYIKDLQKQVQALSNDHKNCSCDK

KAF7818986.1 transcription factor bHLH130 [Senna tora]4.8e-2965.18Show/hide
Query:  GRCDDAGSVLEGHLSLP----DYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQV
        G   +   +L  HLSLP    D S   +LL+L  SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQE VP++DKQ NT++MLDLA+EYIKDLQKQ 
Subjt:  GRCDDAGSVLEGHLSLP----DYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQV

Query:  QALSNDHKNCSC
        ++LS    NC C
Subjt:  QALSNDHKNCSC

QFU95358.1 basic helix-loop-helix DNA-binding superfamily protein 130b [Rhaphiolepis bibas]2.2e-2964.86Show/hide
Query:  GRCDDAGSVLEGHLSLPDYSKS---HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ
        G  ++   VL  HLSLP  S      + L+L  SVPCK+ AKRGCATHPRSIAERVRRTRISER+RKLQE VPN+DKQ NT++MLDLA++YIKDLQKQ +
Subjt:  GRCDDAGSVLEGHLSLPDYSKS---HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ

Query:  ALSNDHKNCSC
         LSN  +NC+C
Subjt:  ALSNDHKNCSC

XP_022148801.1 transcription factor bHLH130-like isoform X1 [Momordica charantia]3.9e-3948.1Show/hide
Query:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS
        DRKLCE+FV+RPSSPETERIFA+FMTSGSG                                     +PP PN +I              +CS L+R SS
Subjt:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS

Query:  SPGR--------CDDAGSVLEGH-------LSLPDYSKSH------------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPN
        SP +         + AG   E         + L      H              L LS SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQ+ VPN
Subjt:  SPGR--------CDDAGSVLEGH-------LSLPDYSKSH------------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPN

Query:  IDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        +D+QANTSEMLDLAI+YIK LQKQVQ LSN+H+NC C
Subjt:  IDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

XP_022148802.1 transcription factor bHLH130-like isoform X2 [Momordica charantia]6.7e-3947.46Show/hide
Query:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS
        DRKLCE+FV+RPSSPETERIFA+FMTSGSG                                     +PP PN +I              +CS L+R SS
Subjt:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS

Query:  SPGRC------------------DDAGSVLEGHLSLPDYSKSHE--------LLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNI
        SP +                   D    ++    S   + K+           L LS SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQ+ VPN+
Subjt:  SPGRC------------------DDAGSVLEGHLSLPDYSKSHE--------LLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNI

Query:  DKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        D+QANTSEMLDLAI+YIK LQKQVQ LSN+H+NC C
Subjt:  DKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

TrEMBL top hitse value%identityAlignment
A0A1J3CQZ4 BHLH domain-containing protein1.4e-2959.84Show/hide
Query:  LRHSSSPGRCDDAGSVLEGHLSLPDYSKSH-------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAI
        L H +  G   +   +L  HLSLP  S ++       + ++L  SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQE VPN+DKQ NTS+MLDLA+
Subjt:  LRHSSSPGRCDDAGSVLEGHLSLPDYSKSH-------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAI

Query:  EYIKDLQKQVQALSNDHKNCSC
        +YIKDLQ+Q + LS D  NC C
Subjt:  EYIKDLQKQVQALSNDHKNCSC

A0A5P9Q3L4 Basic helix-loop-helix DNA-binding superfamily protein 130b1.1e-2964.86Show/hide
Query:  GRCDDAGSVLEGHLSLPDYSKS---HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ
        G  ++   VL  HLSLP  S      + L+L  SVPCK+ AKRGCATHPRSIAERVRRTRISER+RKLQE VPN+DKQ NT++MLDLA++YIKDLQKQ +
Subjt:  GRCDDAGSVLEGHLSLPDYSKS---HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ

Query:  ALSNDHKNCSC
         LSN  +NC+C
Subjt:  ALSNDHKNCSC

A0A6D2KX64 BHLH domain-containing protein6.2e-3059.68Show/hide
Query:  LRHSSSPGRCDDAGSVLEGHLSLPDYSKSH-------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAI
        L H +  G   +   +L  HLSLP  S ++       + ++L  SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQE VPN+DKQ NTS+MLDLA+
Subjt:  LRHSSSPGRCDDAGSVLEGHLSLPDYSKSH-------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAI

Query:  EYIKDLQKQVQALSNDHKNCSCDK
        +YIKDLQ+Q Q LS +  NC C+K
Subjt:  EYIKDLQKQVQALSNDHKNCSCDK

A0A6J1D620 transcription factor bHLH130-like isoform X23.3e-3947.46Show/hide
Query:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS
        DRKLCE+FV+RPSSPETERIFA+FMTSGSG                                     +PP PN +I              +CS L+R SS
Subjt:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS

Query:  SPGRC------------------DDAGSVLEGHLSLPDYSKSHE--------LLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNI
        SP +                   D    ++    S   + K+           L LS SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQ+ VPN+
Subjt:  SPGRC------------------DDAGSVLEGHLSLPDYSKSHE--------LLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNI

Query:  DKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        D+QANTSEMLDLAI+YIK LQKQVQ LSN+H+NC C
Subjt:  DKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

A0A6J1D6H0 transcription factor bHLH130-like isoform X11.9e-3948.1Show/hide
Query:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS
        DRKLCE+FV+RPSSPETERIFA+FMTSGSG                                     +PP PN +I              +CS L+R SS
Subjt:  DRKLCEEFVNRPSSPETERIFARFMTSGSG-------------------------------------QPPSPNNTI--------------HCSLLLRHSS

Query:  SPGR--------CDDAGSVLEGH-------LSLPDYSKSH------------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPN
        SP +         + AG   E         + L      H              L LS SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQ+ VPN
Subjt:  SPGR--------CDDAGSVLEGH-------LSLPDYSKSH------------ELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPN

Query:  IDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        +D+QANTSEMLDLAI+YIK LQKQVQ LSN+H+NC C
Subjt:  IDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

SwissProt top hitse value%identityAlignment
Q66GR3 Transcription factor bHLH1302.0e-3060.87Show/hide
Query:  GRCDDAGSVLEGHLSLPDYSKS-------HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQ
        G   +   +L  HLSLP  S +        + L+L  SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQE VPN+DKQ NTS+MLDLA++YIKDLQ
Subjt:  GRCDDAGSVLEGHLSLPDYSKS-------HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQ

Query:  KQVQALSNDHKNCSC
        +Q + L+++  NC C
Subjt:  KQVQALSNDHKNCSC

Q8H102 Transcription factor bHLH1288.3e-2456.76Show/hide
Query:  RCDDAGSVLEGHLSLP-DYSKSH--ELLRL-SHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ
        R  D  S L    SLP D S ++    ++L   SVPCKI AKRGCATHPRSIAER RRTRIS +++KLQ+ VPN+DKQ + S+MLDLA+++IK LQ Q+Q
Subjt:  RCDDAGSVLEGHLSLP-DYSKSH--ELLRL-SHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ

Query:  ALSNDHKNCSC
         L  D +NC+C
Subjt:  ALSNDHKNCSC

Q9C690 Transcription factor bHLH1224.3e-2865.66Show/hide
Query:  LEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        L  H+SLP      E L LS S+PCKI AKRGCATHPRSIAERVRRT+ISER+RKLQ+ VPN+D Q NT++MLDLA++YIKDLQ+QV+AL      C C
Subjt:  LEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

Q9C8P8 Transcription factor bHLH805.7e-2569.23Show/hide
Query:  SVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        SVPC++ AKRGCATHPRSIAERVRRTRIS+RIR+LQE VPN+DKQ NT++ML+ A+EY+K LQ Q+Q L+   K C C
Subjt:  SVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

Q9M0R0 Transcription factor bHLH813.7e-2456.31Show/hide
Query:  AGSVLEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKN
        +G V  G  S+ D +  +    +  SV  ++ AKRGCATHPRSIAERVRRTRIS+RIRKLQE VPN+DKQ NT++ML+ A+EY+K LQ+Q+Q L+ + K 
Subjt:  AGSVLEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKN

Query:  CSC
        C+C
Subjt:  CSC

Arabidopsis top hitse value%identityAlignment
AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.9e-2556.76Show/hide
Query:  RCDDAGSVLEGHLSLP-DYSKSH--ELLRL-SHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ
        R  D  S L    SLP D S ++    ++L   SVPCKI AKRGCATHPRSIAER RRTRIS +++KLQ+ VPN+DKQ + S+MLDLA+++IK LQ Q+Q
Subjt:  RCDDAGSVLEGHLSLP-DYSKSH--ELLRL-SHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQ

Query:  ALSNDHKNCSC
         L  D +NC+C
Subjt:  ALSNDHKNCSC

AT1G35460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.1e-2669.23Show/hide
Query:  SVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        SVPC++ AKRGCATHPRSIAERVRRTRIS+RIR+LQE VPN+DKQ NT++ML+ A+EY+K LQ Q+Q L+   K C C
Subjt:  SVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.0e-2965.66Show/hide
Query:  LEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC
        L  H+SLP      E L LS S+PCKI AKRGCATHPRSIAERVRRT+ISER+RKLQ+ VPN+D Q NT++MLDLA++YIKDLQ+QV+AL      C C
Subjt:  LEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSC

AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-3160.87Show/hide
Query:  GRCDDAGSVLEGHLSLPDYSKS-------HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQ
        G   +   +L  HLSLP  S +        + L+L  SVPCKI AKRGCATHPRSIAERVRRTRISER+RKLQE VPN+DKQ NTS+MLDLA++YIKDLQ
Subjt:  GRCDDAGSVLEGHLSLPDYSKS-------HELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQ

Query:  KQVQALSNDHKNCSC
        +Q + L+++  NC C
Subjt:  KQVQALSNDHKNCSC

AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.6e-2556.31Show/hide
Query:  AGSVLEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKN
        +G V  G  S+ D +  +    +  SV  ++ AKRGCATHPRSIAERVRRTRIS+RIRKLQE VPN+DKQ NT++ML+ A+EY+K LQ+Q+Q L+ + K 
Subjt:  AGSVLEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIAERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKN

Query:  CSC
        C+C
Subjt:  CSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGGATAGGGAGCAAGAACATGACCGGAAATTATGCGAAGAGTTCGTAAACAGGCCATCCAGCCCTGAAACGGAGCGAATTTTCGCTCGATTCATGACCAGTGG
GAGTGGCCAACCCCCTTCACCAAACAACACCATTCATTGTAGTCTGCTTCTTCGGCACAGCAGCTCCCCTGGTAGATGTGACGATGCCGGGTCTGTGTTGGAGGGTCACT
TGAGTTTGCCTGATTATTCAAAATCCCATGAGCTTCTCCGCTTATCCCACTCTGTTCCTTGCAAAATTAGCGCCAAGCGGGGATGTGCAACTCACCCTAGAAGCATTGCC
GAGAGGGTTAGGCGAACAAGAATAAGTGAAAGGATAAGGAAATTACAGGAACATGTGCCCAATATAGATAAGCAAGCAAACACATCAGAAATGTTGGACTTGGCTATCGA
GTACATAAAGGACCTTCAGAAACAAGTGCAGGCGCTATCAAATGATCATAAAAATTGCAGCTGCGATAAACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGGATAGGGAGCAAGAACATGACCGGAAATTATGCGAAGAGTTCGTAAACAGGCCATCCAGCCCTGAAACGGAGCGAATTTTCGCTCGATTCATGACCAGTGG
GAGTGGCCAACCCCCTTCACCAAACAACACCATTCATTGTAGTCTGCTTCTTCGGCACAGCAGCTCCCCTGGTAGATGTGACGATGCCGGGTCTGTGTTGGAGGGTCACT
TGAGTTTGCCTGATTATTCAAAATCCCATGAGCTTCTCCGCTTATCCCACTCTGTTCCTTGCAAAATTAGCGCCAAGCGGGGATGTGCAACTCACCCTAGAAGCATTGCC
GAGAGGGTTAGGCGAACAAGAATAAGTGAAAGGATAAGGAAATTACAGGAACATGTGCCCAATATAGATAAGCAAGCAAACACATCAGAAATGTTGGACTTGGCTATCGA
GTACATAAAGGACCTTCAGAAACAAGTGCAGGCGCTATCAAATGATCATAAAAATTGCAGCTGCGATAAACACTAG
Protein sequenceShow/hide protein sequence
MEWDREQEHDRKLCEEFVNRPSSPETERIFARFMTSGSGQPPSPNNTIHCSLLLRHSSSPGRCDDAGSVLEGHLSLPDYSKSHELLRLSHSVPCKISAKRGCATHPRSIA
ERVRRTRISERIRKLQEHVPNIDKQANTSEMLDLAIEYIKDLQKQVQALSNDHKNCSCDKH