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Sed0000514 (gene) of Chayote v1 genome

Gene IDSed0000514
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:20453543..20454519
RNA-Seq ExpressionSed0000514
SyntenySed0000514
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027858.1 hypothetical protein SDJN02_09035 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-4168.29Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---
        MA+  D FLALF CYAVVSEVTNAS+WDSRKLLDPASK NS  T+PV PLISP  S N S+S+ PVD  KKQ EPP P  APNNSSS +D K LNNS   
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL
         S NVSE GN  KPL+T K N TE G QSSN E CDGVPDNKKCRD  KLVAC QNN+I   +L
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL

XP_022935129.1 uncharacterized protein LOC111442092 [Cucurbita moschata]1.3e-4065.41Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---
        MA+ RD FLALFLC+AVVSEVTNAS+WDSRKLL+PAS  NS  T+  SP+ISP+ S+N S+S+ PV   KKQ+EPP P  +PNNSSS ++  +LNNS   
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI
         S  VSETG+  KP++TKKENGTEA   SS  ETCDGVPDNKKCRD NKL+AC Q+NLI
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI

XP_022941631.1 uncharacterized protein LOC111446930 [Cucurbita moschata]2.2e-4067.68Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---
        MA+  D FLALF CYAVVSEVTNAS+WDSRKLLDPASK NS  T+PV PLISP  S N S+S+ PVD  KKQ EPP P  APNNSSS +D K LNNS   
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL
         S NVSE GN  KPL+T   N TE G QSSN E CDGVPDNKKCRD  KLVAC QNN+I   +L
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL

XP_022971211.1 uncharacterized protein LOC111470002 [Cucurbita maxima]1.6e-4067.07Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---
        MA+  D FLALF CYAVVSEVTNAS+WDSRKLLDPASK NS  T+PV PLISP  SMN S+S+ PVD  KK+ EPP P  APNNSSS +D K LNNS   
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL
         S NVSE GN  KPL+T K N TE G QSSN E CDGVPDNKKCRD  KLVAC ++N+I   +L
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL

XP_038904076.1 uncharacterized protein LOC120090465 [Benincasa hispida]6.1e-4369.18Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNN---S
        MA+ RD FLALF CYAVVSEVTNA+ WDSRKLL+PAS  NS  T+P SPLISPVPS+N+S+ SVPV+  KK  EPPLP  APN SSS VD K+LNN   S
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNN---S

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI
         SP +SETG+  KP +TKKENGTE    SSN ETCDGVPDN KCRD  KLVAC Q+NLI
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI

TrEMBL top hitse value%identityAlignment
A0A6J1DSQ9 uncharacterized protein LOC111024051 isoform X11.5e-3963.03Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVN--STAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNSGS-
        MA+ RDWFLALF  YAVVSEVT+AS+WDSRKLLDPA K N  +T+ VSP+I+P  S+N+S+ SVPV+  KK  EPP PA+  NNS S VD K+L+NS S 
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVN--STAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNSGS-

Query:  ---PNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL
           P VSETGN  KP  TKK N TEAGPQSSN E CDG+ D KKCRD  KLVAC ++NLI   +L
Subjt:  ---PNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL

A0A6J1DXQ4 uncharacterized protein LOC111024051 isoform X23.4e-3964.38Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVN--STAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNSGS-
        MA+ RDWFLALF  YAVVSEVT+AS+WDSRKLLDPA K N  +T+ VSP+I+P  S+N+S+ SVPV+  KK  EPP PA+  NNS S VD K+L+NS S 
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVN--STAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNSGS-

Query:  ---PNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI
           P VSETGN  KP  TKK N TEAGPQSSN E CDG+ D KKCRD  KLVAC ++NLI
Subjt:  ---PNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI

A0A6J1F4I5 uncharacterized protein LOC1114420926.1e-4165.41Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---
        MA+ RD FLALFLC+AVVSEVTNAS+WDSRKLL+PAS  NS  T+  SP+ISP+ S+N S+S+ PV   KKQ+EPP P  +PNNSSS ++  +LNNS   
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI
         S  VSETG+  KP++TKKENGTEA   SS  ETCDGVPDNKKCRD NKL+AC Q+NLI
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLI

A0A6J1FLM5 uncharacterized protein LOC1114469301.0e-4067.68Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---
        MA+  D FLALF CYAVVSEVTNAS+WDSRKLLDPASK NS  T+PV PLISP  S N S+S+ PVD  KKQ EPP P  APNNSSS +D K LNNS   
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL
         S NVSE GN  KPL+T   N TE G QSSN E CDGVPDNKKCRD  KLVAC QNN+I   +L
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL

A0A6J1I2Q4 uncharacterized protein LOC1114700028.0e-4167.07Show/hide
Query:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---
        MA+  D FLALF CYAVVSEVTNAS+WDSRKLLDPASK NS  T+PV PLISP  SMN S+S+ PVD  KK+ EPP P  APNNSSS +D K LNNS   
Subjt:  MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNS--TAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNS---

Query:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL
         S NVSE GN  KPL+T K N TE G QSSN E CDGVPDNKKCRD  KLVAC ++N+I   +L
Subjt:  GSPNVSETGNEEKPLETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGCACAGAGACTGGTTTCTGGCATTGTTCTTGTGTTACGCAGTCGTTTCGGAGGTAACCAATGCTTCGGTTTGGGATTCAAGAAAGTTGCTAGACCCGGCTTC
TAAAGTTAACTCCACCGCACCAGTTTCCCCTCTCATCAGTCCTGTTCCTTCCATGAATGATTCGAATTCTTCTGTACCCGTTGATGCAAACAAGAAGCAAATGGAACCAC
CCCTGCCTGCGGTTGCACCCAACAATTCATCTTCCAAAGTCGATTTGAAAATACTCAATAATTCGGGTTCACCTAATGTAAGCGAGACTGGCAATGAAGAAAAGCCTTTG
GAGACGAAGAAGGAGAACGGGACTGAAGCCGGTCCTCAATCAAGTAATGGTGAAACTTGTGATGGGGTACCCGACAATAAGAAGTGCAGGGACCACAACAAGTTGGTTGC
TTGTTTCCAAAACAATCTTATTGGTAAATATGAATTGCTCTTCGGCCTTATTACCCTTTTAAGCTTCATTTTTTTCTGGCGTGGATTCTAA
mRNA sequenceShow/hide mRNA sequence
GCTGAAATTTTCTCTCCTCTCTACACAGCTTTTTTTATTTTTTTTATCAATCTCCATCAGCAGCCAACACAACTCGAAGATCCCAAATAAAAGGAAATCCCAGAATTTGA
AGCTTTTGAAAAATTTCTCTCAAACCATCTTTCAGTTTGTCGCAATTCTATACACACTGCACAAATCTGGGTTGTGATTCTAAGCTGTTGTTTTGATTTTGATTGTAATT
TTGATTTTGCTTTGTGCGACTAAAAATTGAATTCTGGGAGAATGAAATTTGCAAGAGCAGTTTCTGAAATTCCAAAGCCCAGAGGGTAGAGAATAATAATTATTATCCTG
ATTGCTTGGGTTCCAATTCAATGGCGGTGCACAGAGACTGGTTTCTGGCATTGTTCTTGTGTTACGCAGTCGTTTCGGAGGTAACCAATGCTTCGGTTTGGGATTCAAGA
AAGTTGCTAGACCCGGCTTCTAAAGTTAACTCCACCGCACCAGTTTCCCCTCTCATCAGTCCTGTTCCTTCCATGAATGATTCGAATTCTTCTGTACCCGTTGATGCAAA
CAAGAAGCAAATGGAACCACCCCTGCCTGCGGTTGCACCCAACAATTCATCTTCCAAAGTCGATTTGAAAATACTCAATAATTCGGGTTCACCTAATGTAAGCGAGACTG
GCAATGAAGAAAAGCCTTTGGAGACGAAGAAGGAGAACGGGACTGAAGCCGGTCCTCAATCAAGTAATGGTGAAACTTGTGATGGGGTACCCGACAATAAGAAGTGCAGG
GACCACAACAAGTTGGTTGCTTGTTTCCAAAACAATCTTATTGGTAAATATGAATTGCTCTTCGGCCTTATTACCCTTTTAAGCTTCATTTTTTTCTGGCGTGGATTCTA
A
Protein sequenceShow/hide protein sequence
MAVHRDWFLALFLCYAVVSEVTNASVWDSRKLLDPASKVNSTAPVSPLISPVPSMNDSNSSVPVDANKKQMEPPLPAVAPNNSSSKVDLKILNNSGSPNVSETGNEEKPL
ETKKENGTEAGPQSSNGETCDGVPDNKKCRDHNKLVACFQNNLIGKYELLFGLITLLSFIFFWRGF