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Sed0000516 (gene) of Chayote v1 genome

Gene IDSed0000516
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationContig00297:91301..92961
RNA-Seq ExpressionSed0000516
SyntenySed0000516
Gene Ontology termsNA
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8363220.1 hypothetical protein BUALT_BualtPtG0005200 [Buddleja alternifolia]2.0e-4653.01Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLSLSRIHTSLY
        MGAGHARSRYLNRKEGDAEGRASDWSEVVT   SHMDSSMCSSAPDPEMWIIQGTLAWRT PVRTG                                  
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLSLSRIHTSLY

Query:  QYMDSYLSST--GLEKAAINRIFLILASRKRKEELEILFPFFRRDQEIDLAESIDSLPI-----GWTVGAMIY-----FTGEVSGSSPGWPS--------
          MDSYLSST  GLEKAAINRI LIL S  RKEE EILFP FRRDQEI  +     L +     G ++ A  +      +  ++   P  P         
Subjt:  QYMDSYLSST--GLEKAAINRIFLILASRKRKEELEILFPFFRRDQEIDLAESIDSLPI-----GWTVGAMIY-----FTGEVSGSSPGWPS--------

Query:  ---YAPLGLGGYSSVGRAPLLQLGRCDYGL--------MSNCPGGNDSI
           +APLG GGYSSVGRAP LQLGRCDYG          S  PG  D +
Subjt:  ---YAPLGLGGYSSVGRAPLLQLGRCDYGL--------MSNCPGGNDSI

KAG8369108.1 hypothetical protein BUALT_Bualt15G0116300 [Buddleja alternifolia]1.9e-3644.53Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLSLSRIHTSLY
        MGAGHARSRYLNRKEGDAEGRASDWSEVVT   SHMDSSMCSSAPDPEMWII GTLAWRT PVRTG                                  
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLSLSRIHTSLY

Query:  QYMDSYLSSTGLEKAAINRIFLILASRKRKEELEILFPFFRRDQEIDLAESIDSLPI-----GWTVGAMIY-----FTGEVSGSSPGWPS----------
          MDSYLSSTGL  A++ +      +   + +   + PF   DQEI  +     L +     G ++ A  +      +  ++   P  P           
Subjt:  QYMDSYLSSTGLEKAAINRIFLILASRKRKEELEILFPFFRRDQEIDLAESIDSLPI-----GWTVGAMIY-----FTGEVSGSSPGWPS----------

Query:  -YAPLGLGGYSSVGRAPLLQLGRCDYGL--------MSNCPGGNDSI
         +APLG GGYSSVGRAP LQLGRCDYG          S  PG  D +
Subjt:  -YAPLGLGGYSSVGRAPLLQLGRCDYGL--------MSNCPGGNDSI

XP_027337204.1 uncharacterized protein LOC113850851 [Abrus precatorius]1.2e-3590.11Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS
        MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTL  R       IQCRSNFLFTRGIRAVRGGPPRLLS
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS

XP_027338909.1 uncharacterized protein LOC113852744 [Abrus precatorius]4.3e-4159.28Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS---------
        MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTL  R       IQCRSNFLFTRGIRAVRGGPPRLLS         
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS---------

Query:  ----LSRIHTSLY--------QYMDSYLSST---------------------------GLEKAAINRIFLILASRKRKEELEILFPFFRRDQEI
            LS  H   +        +++ +YL                              GLEK AINRIF IL S  RKEE EILFP F+RDQEI
Subjt:  ----LSRIHTSLY--------QYMDSYLSST---------------------------GLEKAAINRIFLILASRKRKEELEILFPFFRRDQEI

XP_027344495.1 uncharacterized protein LOC113856973 [Abrus precatorius]3.3e-4158.97Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS---------
        MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTL  R       IQCRSNFLFTRGIRAVRGGPPRLLS         
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS---------

Query:  ----LSRIHTSLY--------QYMDSYLSST---------------------------GLEKAAINRIFLILASRKRKEELEILFPFFRRDQEID
            LS  H   +        +++ +YL                              GLEK AINRIF IL S  RKEE EILFP F+RDQEI+
Subjt:  ----LSRIHTSLY--------QYMDSYLSST---------------------------GLEKAAINRIFLILASRKRKEELEILFPFFRRDQEID

TrEMBL top hitse value%identityAlignment
A0A2U1KL25 Uncharacterized protein ycf684.0e-3256.52Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCR
        MGAGHARSRYLNRKEGDAEGRASDWSEVVTR                              ALSHMDSSMCSSAPDPEMWIIQGTLAWRT PVRTG++  
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCR

Query:  SNFLFTRGIRAVR-GGPPRLLSLSRIHTSLYQYMDSYLSSTGLEKAAIN---RIFLILASR
         +  F   + + R GG     SL       YQ MDSYLSSTGLEKA I     I+L L S+
Subjt:  SNFLFTRGIRAVR-GGPPRLLSLSRIHTSLYQYMDSYLSSTGLEKAAIN---RIFLILASR

A0A371IGX7 Uncharacterized protein ycf68 (Fragment)3.6e-3387.78Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPV-RTG----IQCRSNFLFTRGIRAVRGG
        MGAGHARSRYLNRKEGDAEGRASDWSEVVT   SHMDSSMCSSAPDPEMWIIQGTLAWRTSP  R G    IQCRSNFLFTRGIRA+RGG
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPV-RTG----IQCRSNFLFTRGIRAVRGG

A0A6N2M157 Uncharacterized protein ycf681.3e-3542.96Show/hide
Query:  GAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWR
        G    R RYLNRK GDAEGRASDWSEVVT                                           ALSHMDSSMCSSAPDPEMWIIQGTLAWR
Subjt:  GAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------------------ALSHMDSSMCSSAPDPEMWIIQGTLAWR

Query:  TSPV-RTG----IQCRSNFLFTRGIRAVRGGPPRLLSLSRIHTSLYQYMDSYLSSTGLEKAAINR----IFLILASR----------------KRKEELE
        TSP  R G    IQCRSNFLFTRGIRAVRGGPP LLS       L  Y    L  +  E+    +    I+L L S+                 R +   
Subjt:  TSPV-RTG----IQCRSNFLFTRGIRAVRGGPPRLLSLSRIHTSLYQYMDSYLSSTGLEKAAINR----IFLILASR----------------KRKEELE

Query:  ILFPFFRRDQEIDLAESIDSLPIGWTVGAMIYFTGEVSGSSPGWPS-----------YAPLGLGGYSSVGRAPLLQLGRCDYGL
         L+  F +D+ +      + L +   VG  +    +     P  P            +APLG GGYSSVGRAPLLQLGRCDYGL
Subjt:  ILFPFFRRDQEIDLAESIDSLPIGWTVGAMIYFTGEVSGSSPGWPS-----------YAPLGLGGYSSVGRAPLLQLGRCDYGL

A0A6N2NK86 Uncharacterized protein ycf68 (Fragment)5.3e-3745.74Show/hide
Query:  GDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPV-RTG----IQCRSNFLFTRGIRAVRGGPPRLL-SLSRIH-TSLY-----QYM
        G  +G  + W      ALSHMDSSMCSSAPDPEMWIIQGTLAWRTSP  R G    IQCRSNFLFTRGIRAVRGGPP LL S   IH  S+Y     ++ 
Subjt:  GDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPV-RTG----IQCRSNFLFTRGIRAVRGGPPRLL-SLSRIH-TSLY-----QYM

Query:  DSYLSS-------TGLEKAAINRIFLILASRKRKEELEILFPFFRRDQEIDLA------------------ESIDSLPIGWTVGAMIY------------
        D  + +        GLEKAAINRIFL L S  RKEE EILFP FRRDQEI  +                  +S+ + PI   +G   +            
Subjt:  DSYLSS-------TGLEKAAINRIFLILASRKRKEELEILFPFFRRDQEIDLA------------------ESIDSLPIGWTVGAMIY------------

Query:  --FTGEVSGS----------------------------SPGWPS-----------YAPLGLGGYSSVGRAPLLQLGRCDYGL
          +TGE+  +                             P  P            +APLG GGYSSVGRAPLLQLGRCDYGL
Subjt:  --FTGEVSGS----------------------------SPGWPS-----------YAPLGLGGYSSVGRAPLLQLGRCDYGL

G7JVL4 Uncharacterized protein ycf683.6e-3385.71Show/hide
Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS
        MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSH+DSSMCSSAPDPEMWIIQGTL  R       IQCRSNFLFTRGIRAV+GGP  LLS
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLS

SwissProt top hitse value%identityAlignment
Q49KT9 Uncharacterized protein ycf689.7e-2058.1Show/hide
Query:  RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG-------------IQCRSNF--LFTRGIRAVR-GGPPRLLSLSRIHTSLYQYMDSYLSSTGLEK
        RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG             IQ RSN    F   + + R GG P   SL       YQ MDSYLSSTGL  
Subjt:  RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG-------------IQCRSNF--LFTRGIRAVR-GGPPRLLSLSRIHTSLYQYMDSYLSSTGLEK

Query:  AAINR
        A++ +
Subjt:  AAINR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGGCTCTCAGCCACATGGA
TAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGATCCAATGTAGATCCAACTTTC
TATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTCTCTCGAGAATCCATACATCCCTTTATCAGTATATGGACAGCTATCTCTCGAGCACA
GGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCGCTTCCCGAAAGCGAAAGGAAGAACTTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGA
TCTAGCCGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCCCAC
TTGGCCTCGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGATGTCTAATTGTCCAGGCGGTAATGATAGTATCTTGTAC
CTGAACCGGTGGCTCACTTTTTCTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGGCTCTCAGCCACATGGA
TAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGATCCAATGTAGATCCAACTTTC
TATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTCTCTCGAGAATCCATACATCCCTTTATCAGTATATGGACAGCTATCTCTCGAGCACA
GGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCGCTTCCCGAAAGCGAAAGGAAGAACTTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGA
TCTAGCCGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCCCAC
TTGGCCTCGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGATGTCTAATTGTCCAGGCGGTAATGATAGTATCTTGTAC
CTGAACCGGTGGCTCACTTTTTCTAAGTAA
Protein sequenceShow/hide protein sequence
MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGIQCRSNFLFTRGIRAVRGGPPRLLSLSRIHTSLYQYMDSYLSST
GLEKAAINRIFLILASRKRKEELEILFPFFRRDQEIDLAESIDSLPIGWTVGAMIYFTGEVSGSSPGWPSYAPLGLGGYSSVGRAPLLQLGRCDYGLMSNCPGGNDSILY
LNRWLTFSK