; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000547 (gene) of Chayote v1 genome

Gene IDSed0000547
OrganismSechium edule (Chayote v1)
DescriptionU4/U6 small nuclear ribonucleoprotein PRP4-like protein
Genome locationLG02:46252904..46256247
RNA-Seq ExpressionSed0000547
SyntenySed0000547
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0017070 - U6 snRNA binding (molecular function)
GO:0030621 - U4 snRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146749.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus]3.0e-7371.69Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKLMKVHEEE           EEEV+QYPF T     LLDARIDIAKYSI+ A+SRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAKLWSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW V +
Subjt:  QCIATVSHDRTIKLWSVNS

XP_008464716.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo]5.1e-7371.69Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKLMKVHEEE           EEEV+QYPF T     LLDARIDIAKYSI+ A+SRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAKLWSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW V +
Subjt:  QCIATVSHDRTIKLWSVNS

XP_022999661.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima]3.9e-7370.78Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKL+KVHEEE           EEEV+QYPF T     LLDARIDIAKYSIV AASRLERAKRKRDDPDEDVEAEMDWALRQAESL+LDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAK+WSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW + +
Subjt:  QCIATVSHDRTIKLWSVNS

XP_023525233.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita pepo subsp. pepo]6.6e-7370.78Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKL+KVHEEE           EEEV+QYPF T     LLDARIDIAKYSIV AA+RLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAK+WSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW + +
Subjt:  QCIATVSHDRTIKLWSVNS

XP_038885479.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida]8.7e-7371.69Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKLMKVHEEE           EEEV+QYPF T     LLDARIDIAKYSI+ AASRLERAKRKRDDPDEDVEAEMDWALRQA SLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAKLWSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW V +
Subjt:  QCIATVSHDRTIKLWSVNS

TrEMBL top hitse value%identityAlignment
A0A0A0KHD8 WD_REPEATS_REGION domain-containing protein1.4e-7371.69Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKLMKVHEEE           EEEV+QYPF T     LLDARIDIAKYSI+ A+SRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAKLWSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW V +
Subjt:  QCIATVSHDRTIKLWSVNS

A0A1S4E4U8 U4/U6 small nuclear ribonucleoprotein PRP4-like protein2.5e-7371.69Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKLMKVHEEE           EEEV+QYPF T     LLDARIDIAKYSI+ A+SRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAKLWSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW V +
Subjt:  QCIATVSHDRTIKLWSVNS

A0A6J1DAU7 U4/U6 small nuclear ribonucleoprotein PRP4-like protein2.3e-7169.86Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKL+K HEEE           EEEV+QYPF T     LL+ R+DIAKYSIV AASRLERAKRKRDDPDEDVEAEMDWALRQA SLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAKLWSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW V +
Subjt:  QCIATVSHDRTIKLWSVNS

A0A6J1G322 U4/U6 small nuclear ribonucleoprotein PRP4-like protein7.2e-7370.32Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKL+KVHEEE           EEEV+QYPF T     LLDARIDIAKYS+V AASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAK+WSMP VRKVSNF GHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW + +
Subjt:  QCIATVSHDRTIKLWSVNS

A0A6J1KDQ7 U4/U6 small nuclear ribonucleoprotein PRP4-like protein1.9e-7370.78Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS
        MARLDAEGQLEKL+KVHEEE           EEEV+QYPF T     LLDARIDIAKYSIV AASRLERAKRKRDDPDEDVEAEMDWALRQAESL+LDCS
Subjt:  MARLDAEGQLEKLMKVHEEE-----------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCS

Query:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG
        EIGDDRPLSGCSFS+DGK LATSSLSGVAK+WSMP VRKVSNFKGHTERVTDV FSPVNECLATAS D TARLWS +G            +  +     G
Subjt:  EIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDG

Query:  QCIATVSHDRTIKLWSVNS
        + + T S D+T +LW + +
Subjt:  QCIATVSHDRTIKLWSVNS

SwissProt top hitse value%identityAlignment
O22212 U4/U6 small nuclear ribonucleoprotein PRP4-like protein1.1e-5149.77Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGD
        + R D  GQL+KL+K HEE+       ++EV++YPF T     L +ARI+IAK+S+  AA R++RAKR+RDDPDED++AE  WAL+ A+ + LDCS  GD
Subjt:  MARLDAEGQLEKLMKVHEEE-------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGD

Query:  DRPLSGCSFSADGKSLATSSLSGVAKLWSMPLV-RKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDGQCI
        DRPL+GCSFS DGK LAT SLSGV KLW MP V   ++  K H ER TDV FSPV++CLATAS D TA+LW   G            +  +     G+ +
Subjt:  DRPLSGCSFSADGKSLATSSLSGVAKLWSMPLV-RKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDGQCI

Query:  ATVSHDRTIKLWSVNSKDE
         T S+D+T +LW +N+  E
Subjt:  ATVSHDRTIKLWSVNSKDE

O43172 U4/U6 small nuclear ribonucleoprotein Prp42.2e-1830.73Show/hide
Query:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS
        EK  K  EE ++        +L  AR+ IA YS+  A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS + K LAT+  S
Subjt:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS

Query:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPPIPNLGMI--RDGQCIATVSHDRTIKLWSV
        G+ KLWS+P    +   +GH   V  + F P +          LA+ + D + +LWS         + G  +    ++    G+ + T  +DR+ +LW +
Subjt:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPPIPNLGMI--RDGQCIATVSHDRTIKLWSV

Query:  NSKDE
         +++E
Subjt:  NSKDE

Q3MHE2 U4/U6 small nuclear ribonucleoprotein Prp42.2e-1830.73Show/hide
Query:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS
        EK  K  EE ++        +L  AR+ IA YS+  A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS + K LAT+  S
Subjt:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS

Query:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPP--IPNLGMIRDGQCIATVSHDRTIKLWSV
        G+ KLWS+P    +   +GH   V  + F P +          LA+ + D + +LWS         + G    +  +     G+ + T  +DR+ +LW +
Subjt:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPP--IPNLGMIRDGQCIATVSHDRTIKLWSV

Query:  NSKDE
         +++E
Subjt:  NSKDE

Q5NVD0 U4/U6 small nuclear ribonucleoprotein Prp42.2e-1830.73Show/hide
Query:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS
        EK  K  EE ++        +L  AR+ IA YS+  A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS + K LAT+  S
Subjt:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS

Query:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPPIPNLGMI--RDGQCIATVSHDRTIKLWSV
        G+ KLWS+P    +   +GH   V  + F P +          LA+ + D + +LWS         + G  +    ++    G+ + T  +DR+ +LW +
Subjt:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPPIPNLGMI--RDGQCIATVSHDRTIKLWSV

Query:  NSKDE
         +++E
Subjt:  NSKDE

Q9DAW6 U4/U6 small nuclear ribonucleoprotein Prp42.8e-1830.73Show/hide
Query:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS
        EK  K  EE ++        +L  AR+ IA YS+  A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS + K LAT+  S
Subjt:  EKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS

Query:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPPIPNLGMI--RDGQCIATVSHDRTIKLWSV
        G+ KLWS+P    +   +GH   V  + F P +          LA+ + D + +LWS         + G  +    ++    G+ + T  +DR+ +LW +
Subjt:  GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNEC--------LATASPDPTARLWSFKG------VRGPPIPNLGMI--RDGQCIATVSHDRTIKLWSV

Query:  NSKDE
         +++E
Subjt:  NSKDE

Arabidopsis top hitse value%identityAlignment
AT2G05720.1 Transducin/WD40 repeat-like superfamily protein2.3e-3154.89Show/hide
Query:  LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLV-RKVSNFKGH
        L +ARI+I K  I  AA R++R  R+R+DPDED  AE   AL+  + +VL  S+ GDDRPL+GCS S DGK L T SLSGV KLW +P V  K+   KGH
Subjt:  LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLSGVAKLWSMPLV-RKVSNFKGH

Query:  TERVTDVTFSPV-NECLATASPDPTARLWSFKG
         E VTDV FS V +ECLATAS D T ++W   G
Subjt:  TERVTDVTFSPV-NECLATASPDPTARLWSFKG

AT2G41500.1 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related8.1e-5349.77Show/hide
Query:  MARLDAEGQLEKLMKVHEEE-------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGD
        + R D  GQL+KL+K HEE+       ++EV++YPF T     L +ARI+IAK+S+  AA R++RAKR+RDDPDED++AE  WAL+ A+ + LDCS  GD
Subjt:  MARLDAEGQLEKLMKVHEEE-------EEEVIQYPFCT-----LLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGD

Query:  DRPLSGCSFSADGKSLATSSLSGVAKLWSMPLV-RKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDGQCI
        DRPL+GCSFS DGK LAT SLSGV KLW MP V   ++  K H ER TDV FSPV++CLATAS D TA+LW   G            +  +     G+ +
Subjt:  DRPLSGCSFSADGKSLATSSLSGVAKLWSMPLV-RKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGV-------RGPPIPNLGMIRDGQCI

Query:  ATVSHDRTIKLWSVNSKDE
         T S+D+T +LW +N+  E
Subjt:  ATVSHDRTIKLWSVNSKDE

AT4G32551.1 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain2.1e-0829.38Show/hide
Query:  DDPDEDVEAEMDWALRQAESLVLDCS------EIGDDR----PLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLAT
        DD  E   ++ D   R A +  +D S      E+   R     ++ C FS+DGK LA++     A LW    ++  +  + HT  +TD+ FSP    LAT
Subjt:  DDPDEDVEAEMDWALRQAESLVLDCS------EIGDDR----PLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLAT

Query:  ASPDPTARLW----------SFKGVRGPPIPNLGM--IRDGQCIATVSHDRTIKLWSVNS
        +S D T R+W          +F G     + +L    I+D   I +  +D  I+ WS+N+
Subjt:  ASPDPTARLW----------SFKGVRGPPIPNLGM--IRDGQCIATVSHDRTIKLWSVNS

AT4G32551.2 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain2.1e-0829.38Show/hide
Query:  DDPDEDVEAEMDWALRQAESLVLDCS------EIGDDR----PLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLAT
        DD  E   ++ D   R A +  +D S      E+   R     ++ C FS+DGK LA++     A LW    ++  +  + HT  +TD+ FSP    LAT
Subjt:  DDPDEDVEAEMDWALRQAESLVLDCS------EIGDDR----PLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLAT

Query:  ASPDPTARLW----------SFKGVRGPPIPNLGM--IRDGQCIATVSHDRTIKLWSVNS
        +S D T R+W          +F G     + +L    I+D   I +  +D  I+ WS+N+
Subjt:  ASPDPTARLW----------SFKGVRGPPIPNLGM--IRDGQCIATVSHDRTIKLWSVNS

AT5G16750.1 Transducin family protein / WD-40 repeat family protein8.5e-1027.73Show/hide
Query:  DRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLW---------SFKGVRGPPIPNLGMIRDGQC
        D+ ++  + + +   + T S    A +W +P +  V   KGH  R+  V FS V++C+ TAS D T ++W         +F+G     +     I DG  
Subjt:  DRPLSGCSFSADGKSLATSSLSGVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLW---------SFKGVRGPPIPNLGMIRDGQC

Query:  IATVSHDRTIKLWSVNSKD
          +   D  +KLW+VN+ +
Subjt:  IATVSHDRTIKLWSVNSKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCACGAGGAAGAGGAGGAGGAAGTTATTCAGTATCCCTTTTGTACTCTCTTGGATGCCAGAAT
TGATATTGCAAAGTATTCTATCGTAACAGCAGCTTCACGTCTTGAACGTGCAAAGAGGAAAAGGGATGACCCGGATGAAGATGTGGAAGCAGAAATGGATTGGGCTTTGA
GACAGGCTGAAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGCTGTTCTTTCTCAGCTGATGGAAAATCCCTTGCCACTAGTTCATTAAGT
GGAGTGGCAAAACTGTGGAGCATGCCTCTAGTAAGAAAGGTTTCCAACTTTAAGGGGCATACAGAGCGTGTTACTGATGTAACATTTTCTCCAGTGAATGAGTGTTTAGC
AACTGCCTCTCCTGACCCAACAGCAAGGTTGTGGTCTTTTAAAGGGGTGCGAGGTCCTCCGATACCTAATTTGGGAATGATTAGAGATGGACAATGCATTGCAACTGTGT
CGCATGATCGAACCATAAAGCTCTGGTCTGTCAACAGTAAAGACGAACAGGCTATGGACGTCGACCGAGTTTCATAG
mRNA sequenceShow/hide mRNA sequence
CCGTATTAAATTAATACTTAAAACAAACACGCCTTAAGACGTGGCTTACGCCACTGCTTCAAGCGGCCTCCTCCATTTCAGCAGCTCAGTGTCGCCGCCACTTCTCTCCT
AGCGTTCTTGATCTGAATTTTGACTCCGTCGTTGGCACTGAGATGGAATGGTAAAAGGAGCTCAATATCTGGGATAAGCGTATTTTGTTTTTAAGTTTCATTTGTGATCG
ATGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTGCTGAAACCCTTCCTGATGCTGAAGATGAGGATCTTGACAACCCATCAGGTTGCGATCAATAATGGCAAGGT
TGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCACGAGGAAGAGGAGGAGGAAGTTATTCAGTATCCCTTTTGTACTCTCTTGGATGCCAGAATTGATATTGCA
AAGTATTCTATCGTAACAGCAGCTTCACGTCTTGAACGTGCAAAGAGGAAAAGGGATGACCCGGATGAAGATGTGGAAGCAGAAATGGATTGGGCTTTGAGACAGGCTGA
AAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGCTGTTCTTTCTCAGCTGATGGAAAATCCCTTGCCACTAGTTCATTAAGTGGAGTGGCAA
AACTGTGGAGCATGCCTCTAGTAAGAAAGGTTTCCAACTTTAAGGGGCATACAGAGCGTGTTACTGATGTAACATTTTCTCCAGTGAATGAGTGTTTAGCAACTGCCTCT
CCTGACCCAACAGCAAGGTTGTGGTCTTTTAAAGGGGTGCGAGGTCCTCCGATACCTAATTTGGGAATGATTAGAGATGGACAATGCATTGCAACTGTGTCGCATGATCG
AACCATAAAGCTCTGGTCTGTCAACAGTAAAGACGAACAGGCTATGGACGTCGACCGAGTTTCATAGCTTCGACATGGTAGACATTTGAAAAACTTGGCAGCCTCATTTG
TGGGTAAATAGGATAAAGAGCTCCCTTAATCATGTAGGCATTATGTAACTGATTGAATGCTTAAGCAAATAGTGTATGAAAGAGGCAACTTTGTACAAATGTTTTCATGG
TAGAATTCTGATAAAGTTGGGCTATGCCCCATCTATGTTTACTGTATACTATCTGATCAAAAAAGTGAAGCTTAGATAACGAGCTAATAGAAAACCTATCTTGGGCTTTA
TCTATGAATCTATTATTTGTTGTCGCATGTTTAATTCAACCAGTGTAATGAAATTTGATTTTGTGGG
Protein sequenceShow/hide protein sequence
MARLDAEGQLEKLMKVHEEEEEEVIQYPFCTLLDARIDIAKYSIVTAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSADGKSLATSSLS
GVAKLWSMPLVRKVSNFKGHTERVTDVTFSPVNECLATASPDPTARLWSFKGVRGPPIPNLGMIRDGQCIATVSHDRTIKLWSVNSKDEQAMDVDRVS