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Sed0000554 (gene) of Chayote v1 genome

Gene IDSed0000554
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:32789179..32789819
RNA-Seq ExpressionSed0000554
SyntenySed0000554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602066.1 hypothetical protein SDJN03_07299, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3154.71Show/hide
Query:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR
        M+D TN    K  P K  VIITVYVE+P KQ+  SHQNP  + KN++P   PK PK RGYDRRA+LLAYSRELRN           K KW+VK E A  R
Subjt:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR

Query:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG
        R          RYERVG  REERTE+V+  RCLPKCFN    + + + GSSI  KLKSL+G LS  CKRG
Subjt:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG

XP_004140323.1 uncharacterized protein LOC101218772 [Cucumis sativus]7.5e-3153.71Show/hide
Query:  MDDSTN--KTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPK-GLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPE
        M   TN  +T P+K  VIITVYVE+P  Q  + H+ P    N   N+NPK  L KTP   GYDRRAQLLAYSR LRN              KWKWKV+ E
Subjt:  MDDSTN--KTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPK-GLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPE

Query:  MARSR---------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR
            R         RWRYERVG  REERTE+VD P C PKC     N K T++SGSSIF KLKSLLGELS  CKR
Subjt:  MARSR---------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR

XP_022962296.1 uncharacterized protein LOC111462789 [Cucurbita moschata]2.0e-3154.71Show/hide
Query:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR
        M+D TN    K  P K  VIITVYVE+P KQ+  SHQNP  + KN++P   PK PK RGYDRRA+LLAYSRELRN           K KW+VK E A  R
Subjt:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR

Query:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG
        R          RYERVG  REERTE+V+  RCLPKCFN    + + + GSSI  KLKSL+G LS  CKRG
Subjt:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG

XP_023546181.1 uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo]2.3e-3255.29Show/hide
Query:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR
        M+D TN    K  P K  VIITVYVE+P KQ+  SHQNP  + KN++P   PK PK RGYDRRA+LLAYSRELRN           K KW+VK E A  R
Subjt:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR

Query:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG
        R          RYERVG TREERTE+V+  RCLPKCFN    + + + GSSI  KLKSL+G LS  CKRG
Subjt:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG

XP_038874461.1 uncharacterized protein LOC120067113 [Benincasa hispida]1.1e-3255.03Show/hide
Query:  STNKTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPEMARSR-
        + N+T PQK GVIITVYVE+P  Q  +SH+ P    N + N N   LPKTP   GYDRRAQLLAYSR LRN              KWKW+V+ E    R 
Subjt:  STNKTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPEMARSR-

Query:  --------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR
                RWRYERVG  REE TE+VD P C PKCF    + K T +SGSSIF KLKSLLGELSN CKR
Subjt:  --------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR

TrEMBL top hitse value%identityAlignment
A0A0A0KN34 Uncharacterized protein3.6e-3153.71Show/hide
Query:  MDDSTN--KTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPK-GLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPE
        M   TN  +T P+K  VIITVYVE+P  Q  + H+ P    N   N+NPK  L KTP   GYDRRAQLLAYSR LRN              KWKWKV+ E
Subjt:  MDDSTN--KTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPK-GLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPE

Query:  MARSR---------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR
            R         RWRYERVG  REERTE+VD P C PKC     N K T++SGSSIF KLKSLLGELS  CKR
Subjt:  MARSR---------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR

A0A1S3CDS3 uncharacterized protein LOC1034992684.8e-3153.71Show/hide
Query:  MDDSTN--KTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPK-GLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPE
        M   TN  +T P+K  VIITVYVE+P  Q  +SH+      N   + NPK  LPKTP   GYDRRAQLLAYSR LRN              KWKWKV+ E
Subjt:  MDDSTN--KTKPQKGGVIITVYVETPTKQTKSSHQNP----NPLKNTNPK-GLPKTPKCRGYDRRAQLLAYSRELRN--------------KWKWKVKPE

Query:  MARSR---------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR
            R         RWRYERVG  REERTE+VD P C PKC     N K T++SGSSIF KLKSLLGELS  CKR
Subjt:  MARSR---------RWRYERVGKTREERTEMVDHPRCLPKCF----NNKGTAQSGSSIFEKLKSLLGELSNACKR

A0A6J1CJQ0 uncharacterized protein LOC1110119267.1e-2755.48Show/hide
Query:  TNKTKPQKGGVIITVYVETPTKQTKSSHQN--PNPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN--------KWKWKVKPEMARSRRWRYERVGKT
        TNKT P+K GVIITVYVE+P K   +SHQN   N L   NPK      + RGYDRRAQLLAYSR+LRN        KWK KV+ E       RYERVG  
Subjt:  TNKTKPQKGGVIITVYVETPTKQTKSSHQN--PNPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN--------KWKWKVKPEMARSRRWRYERVGKT

Query:  REERTEMVDHPRCLPKCF-----NNKGTAQSGSSIFEKLKSLLGELSNACKRGCD
        RE+R E+VD  RC PKCF       K T +SGSSI  K+KSLL ELS  CKR  D
Subjt:  REERTEMVDHPRCLPKCF-----NNKGTAQSGSSIFEKLKSLLGELSNACKRGCD

A0A6J1HCQ4 uncharacterized protein LOC1114627899.6e-3254.71Show/hide
Query:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR
        M+D TN    K  P K  VIITVYVE+P KQ+  SHQNP  + KN++P   PK PK RGYDRRA+LLAYSRELRN           K KW+VK E A  R
Subjt:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR

Query:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG
        R          RYERVG  REERTE+V+  RCLPKCFN    + + + GSSI  KLKSL+G LS  CKRG
Subjt:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG

A0A6J1JSH9 uncharacterized protein LOC1114871484.8e-3154.12Show/hide
Query:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR
        M+D TN    K  P K  VIITVYVE+P KQ+  SHQNP  + KN++P   PK  K RGYDRRA+LLAYSRELRN           K KW+VK E A  R
Subjt:  MDDSTN----KTKPQKGGVIITVYVETPTKQTKSSHQNPNPL-KNTNPKGLPKTPKCRGYDRRAQLLAYSRELRN-----------KWKWKVKPEMARSR

Query:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG
        R          RYERVG  REERTE+V+  RCLPKCFN    + + + GSSI  KLKSL+G LS  CKRG
Subjt:  R---------WRYERVGKTREERTEMVDHPRCLPKCFN---NKGTAQSGSSIFEKLKSLLGELSNACKRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77765.2 unknown protein4.4e-0530.19Show/hide
Query:  GVIITVYVETPTKQTKS------SHQNPNPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELR----------------NKWKWKVKPEMARSRRWRYERV
        GVIITVYV+  T   +S      + +    ++ T  +G+    K RGYDRRA LLAY R+ R                NK + ++ P   + RRW    +
Subjt:  GVIITVYVETPTKQTKS------SHQNPNPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELR----------------NKWKWKVKPEMARSRRWRYERV

Query:  GK---------TREERTEMVDHPRCLPKCFNNKGTAQSGSSIFEKLKSLLGELSNACKR
         K          R+ RT    H     +  + +  A+  S I+ KLK ++G LS  C R
Subjt:  GK---------TREERTEMVDHPRCLPKCFNNKGTAQSGSSIFEKLKSLLGELSNACKR

AT1G77765.3 unknown protein3.8e-0429.56Show/hide
Query:  GVIITVYVETPTKQTKS------SHQNPNPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELR----------------NKWKWKVKPEMARSRRWRYERV
        GVIITVYV+  T   +S      + +    ++ T  +G+    K RGYDRRA LLAY R+ R                NK +        + RRW    +
Subjt:  GVIITVYVETPTKQTKS------SHQNPNPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELR----------------NKWKWKVKPEMARSRRWRYERV

Query:  GK---------TREERTEMVDHPRCLPKCFNNKGTAQSGSSIFEKLKSLLGELSNACKR
         K          R+ RT    H     +  + +  A+  S I+ KLK ++G LS  C R
Subjt:  GK---------TREERTEMVDHPRCLPKCFNNKGTAQSGSSIFEKLKSLLGELSNACKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACTCAACAAACAAAACCAAACCCCAAAAAGGAGGAGTAATCATTACTGTATACGTAGAAACTCCCACAAAACAAACCAAAAGTTCCCATCAAAACCCCAATCC
CCTGAAGAACACAAATCCAAAGGGCCTTCCCAAAACTCCCAAATGCAGAGGCTACGATCGCCGGGCTCAGCTTCTTGCCTATTCTCGCGAGCTCAGAAACAAATGGAAAT
GGAAGGTGAAACCGGAGATGGCGCGGTCGAGACGGTGGAGATATGAGCGAGTTGGGAAAACCAGAGAAGAGAGAACAGAGATGGTGGATCATCCGCGATGCCTGCCAAAG
TGCTTCAACAACAAAGGCACAGCCCAATCTGGTTCTTCCATTTTTGAGAAATTGAAGAGCCTGTTGGGAGAGTTATCGAACGCCTGCAAACGCGGTTGTGATCATCATTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGATGACTCAACAAACAAAACCAAACCCCAAAAAGGAGGAGTAATCATTACTGTATACGTAGAAACTCCCACAAAACAAACCAAAAGTTCCCATCAAAACCCCAATCC
CCTGAAGAACACAAATCCAAAGGGCCTTCCCAAAACTCCCAAATGCAGAGGCTACGATCGCCGGGCTCAGCTTCTTGCCTATTCTCGCGAGCTCAGAAACAAATGGAAAT
GGAAGGTGAAACCGGAGATGGCGCGGTCGAGACGGTGGAGATATGAGCGAGTTGGGAAAACCAGAGAAGAGAGAACAGAGATGGTGGATCATCCGCGATGCCTGCCAAAG
TGCTTCAACAACAAAGGCACAGCCCAATCTGGTTCTTCCATTTTTGAGAAATTGAAGAGCCTGTTGGGAGAGTTATCGAACGCCTGCAAACGCGGTTGTGATCATCATTG
A
Protein sequenceShow/hide protein sequence
MDDSTNKTKPQKGGVIITVYVETPTKQTKSSHQNPNPLKNTNPKGLPKTPKCRGYDRRAQLLAYSRELRNKWKWKVKPEMARSRRWRYERVGKTREERTEMVDHPRCLPK
CFNNKGTAQSGSSIFEKLKSLLGELSNACKRGCDHH