; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000558 (gene) of Chayote v1 genome

Gene IDSed0000558
OrganismSechium edule (Chayote v1)
Descriptionhistone H1
Genome locationLG01:71391692..71393240
RNA-Seq ExpressionSed0000558
SyntenySed0000558
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057394.1 histone H1 [Cucumis melo var. makuwa]5.1e-8981.88Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N  AK KK+KEPKEKKPAA RKPRNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEKQKQLP NFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVKSSFKLK A+S   KP +PAKKKP AAKPK+KA A  KAVAK+PAKPK AAKPKPKT A    KPKAA KPK AP K KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA KT+AAPKPKAK  PAKAARTSTRTSPGRKAPAP+P  KKAPA KKAP+KS KAKKVKS AKKA +KRG K
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

XP_004140078.1 histone H1 [Cucumis sativus]3.3e-8880.43Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N   + KK+KEPK+KKPAA RKPRNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEKQKQLPPNFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLV SGKLVKVKSSFKLK A+S   KP +PAKKKP AAKPK+K  A  KAVAK+PAKPK AAKPKPK      PKPKAA KPK APAK KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA KT+AAPKPKAK  PAKAARTSTRTSPGRKAPAP+P  KKAPA KKAP+KS KAKKVKS AKK+ AKRG K
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

XP_008449373.1 PREDICTED: histone H1 [Cucumis melo]5.1e-8981.88Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N  AK KK+KEPKEKKPAA RKPRNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEKQKQLP NFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVKSSFKLK A+S   KP +PAKKKP AAKPK+KA A  KAVAK+PAKPK AAKPKPKT A    KPKAA KPK AP K KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA KT+AAPKPKAK  PAKAARTSTRTSPGRKAPAP+P  KKAPA KKAP+KS KAKKVKS AKKA +KRG K
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

XP_022145924.1 histone H1 [Momordica charantia]4.0e-9484.42Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N  AK KK+KEPKEKKPAA RKPRNPPTHPPYEEMI DAIV+LKERTGSSQYAITKFIEEKQK LP NFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVKSSFKLK A+S   KP +PAKKKPAAAKPK KA A  KAVAK+PAKPK AAKPKPKTAA    KPKAA KPKPAPAK KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAATKT+AAPKPKAK  PAK ARTSTRTSPGR+APAP+PAPKKAPA KKAPAKS KAKKVKSPAKKA AKRGKK
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

XP_038888055.1 histone H1-like [Benincasa hispida]1.8e-8981.88Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP   E AEENP N  AK KK+KEPKEKKPAA +K RNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEK+KQLPPNFKK+L
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVK+SFKLK A+S   KP APAKKKP AAKPK+KA A  KAVAK+PAKPK AAKPKPKTAA    KPKAA KPKPA AK KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA KT+AAPKPKAK  PAK ARTSTRTSPGRKAPAP+PA KKA A KKAPAKS KAKKVKSPAKKA AKRG+K
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

TrEMBL top hitse value%identityAlignment
A0A0A0KDR2 H15 domain-containing protein1.6e-8880.43Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N   + KK+KEPK+KKPAA RKPRNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEKQKQLPPNFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLV SGKLVKVKSSFKLK A+S   KP +PAKKKP AAKPK+K  A  KAVAK+PAKPK AAKPKPK      PKPKAA KPK APAK KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA KT+AAPKPKAK  PAKAARTSTRTSPGRKAPAP+P  KKAPA KKAP+KS KAKKVKS AKK+ AKRG K
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

A0A1S3BL93 histone H12.5e-8981.88Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N  AK KK+KEPKEKKPAA RKPRNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEKQKQLP NFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVKSSFKLK A+S   KP +PAKKKP AAKPK+KA A  KAVAK+PAKPK AAKPKPKT A    KPKAA KPK AP K KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA KT+AAPKPKAK  PAKAARTSTRTSPGRKAPAP+P  KKAPA KKAP+KS KAKKVKS AKKA +KRG K
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

A0A5A7UQL0 Histone H12.5e-8981.88Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N  AK KK+KEPKEKKPAA RKPRNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEKQKQLP NFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVKSSFKLK A+S   KP +PAKKKP AAKPK+KA A  KAVAK+PAKPK AAKPKPKT A    KPKAA KPK AP K KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA KT+AAPKPKAK  PAKAARTSTRTSPGRKAPAP+P  KKAPA KKAP+KS KAKKVKS AKKA +KRG K
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

A0A6J1CWP2 histone H12.0e-9484.42Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AE AEENP N  AK KK+KEPKEKKPAA RKPRNPPTHPPYEEMI DAIV+LKERTGSSQYAITKFIEEKQK LP NFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVKSSFKLK A+S   KP +PAKKKPAAAKPK KA A  KAVAK+PAKPK AAKPKPKTAA    KPKAA KPKPAPAK KSSAVA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAATKT+AAPKPKAK  PAK ARTSTRTSPGR+APAP+PAPKKAPA KKAPAKS KAKKVKSPAKKA AKRGKK
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

A0A6J1ES19 histone H14.7e-8881.52Show/hide
Query:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL
        MATEE VVPVES AEP  AEPAEENP N  AK KK+K+PKEKKPAAARK RNPPTHPPYEEMIKDAIV+LKERTGSSQYAITKFIEEKQKQLP NFKKLL
Subjt:  MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA
        LFHLKKLVASGKLVKVKSSFKLKSA+S   KP +PA K+PAAAKPK KA A  KAVAK+ AKPK AAKPKPKTAA    KPKAAAKPKP  AK KSS VA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVA

Query:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        KPKAA+KT+AAPKPKAK  PAKA+RTSTRTSPG+KAPAP+PA KKAPA KKAPAKS  AKKVKSPA+KA A+R KK
Subjt:  KPKAATKTRAAPKPKAK-VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

SwissProt top hitse value%identityAlignment
P08283 Histone H11.3e-4758.01Show/hide
Query:  MATEEAVVPVESVAEPIIAEPA----EENPENND--AKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP
        MATEE +V VE+V EPI+ EP      E PE  +  A+V+K K+ K  KP  A KPRNP +HP YEEMIKDAIVSLKE+ GSSQYAI KFIEEKQKQLP 
Subjt:  MATEEAVVPVESVAEPIIAEPA----EENPENND--AKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAV-AKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAK
        NFKKLLL +LKK VASGKL+KVK SFKL +           A KKPA AKPKAK  A  K+V AK  AKPK  A  KPK A+K K     AAKPK A AK
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAV-AKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAK

Query:  PKSSAVAKPKAATKTRAAPKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRG
        PK+ A      A K +A  KPK+KV PAK A+TS +T+PG+K      A  K  A KK P KS KAK VKSP KK + KRG
Subjt:  PKSSAVAKPKAATKTRAAPKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRG

P23444 Histone H18.6e-3149.45Show/hide
Query:  MATEEAVVP---VESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQK-QLPPNF
        MAT+    P   V++  E     PA    + N AK KKA  PK+         R  PTH PY EM+ +AI SLKERTGSS YAI KF+E+K K +LPPNF
Subjt:  MATEEAVVP---VESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQK-QLPPNF

Query:  KKLLLFHLKKLVASGKLVKVKSSFKLKSA-------RSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKP----KPKTAAKPKPKPKAAA
        +KLL   LKKLVA GKL KVK+S+KL SA       ++   KP   AKK  AAAKPKAK PA     AK   KPK AAKP    KPKT AKPK KP A A
Subjt:  KKLLLFHLKKLVASGKLVKVKSSFKLKSA-------RSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKP----KPKTAAKPKPKPKAAA

Query:  KPKPAPAKPKSSAVAKPKAATKTRAAPKPKAKVPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKK
        KPK A AKPK                P  K    AKAA+TS + +PG+KAPA + AP K  A     A S KAKK
Subjt:  KPKPAPAKPKSSAVAKPKAATKTRAAPKPKAKVPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKK

P26568 Histone H1.17.1e-3352.04Show/hide
Query:  PIIAEPAEENPENNDAKVKKAKEPKEKKP-AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVASGKLV
        P+     E+ P     K K  KE KEKK  AAA K R   +HP YEEMIKDAIV+LKERTGSSQYAI KFIEEK+K+LPP F+KLLL +LK+LVASGKLV
Subjt:  PIIAEPAEENPENNDAKVKKAKEPKEKKP-AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVASGKLV

Query:  KVKSSFKLKSARSEASKP------DAPAKKKP---AAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVAKPKAA
        KVK+SFKL SA ++AS P       APAKKKP   A  K K K  AA KA      KPK AA  K    AK KP P+A A                  AA
Subjt:  KVKSSFKLKSARSEASKP------DAPAKKKP---AAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVAKPKAA

Query:  TKTRAA-PKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKS-PKAKKVKSPAKKAAAK
        TK +A   KPKAK  PAKAA+T+  TSP +KA A           KK P K   K K VKSPAK+A+++
Subjt:  TKTRAA-PKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKS-PKAKKVKSPAKKAAAK

P26569 Histone H1.24.3e-3856.79Show/hide
Query:  MATEEAVVP--VESVAEPIIAEPAEENPENNDAKVKKAKEPK-EKKP---AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP
        M+ EE  VP  V+S A     +  E+ P     K KK    K  KKP   AA  K +   +HP YEEMIKDAIV+LKERTGSSQYAI KFIEEK K LPP
Subjt:  MATEEAVVP--VESVAEPIIAEPAEENPENNDAKVKKAKEPK-EKKP---AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEAS-KPDAPAKKK-PAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKP--A
         F+KLLL +LK+LVAS KLVKVK+SFK+ SARS A+ KP AP KKK    AKPK K      A A APAK K AAK   K AAK   K K  AKPK    
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEAS-KPDAPAKKK-PAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKP--A

Query:  PAKPKSSAVAKPKAATKTRA-APKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
         AKPKS +VA   A +KT+A A KPKAK  PAKA+RTSTRTSPG+K  AP    KK    KKAPAKS    KVKSPAK+A+ ++ KK
Subjt:  PAKPKSSAVAKPKAATKTRA-APKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

P37218 Histone H19.5e-4658.78Show/hide
Query:  MATEEAVVPVESVAEPIIAEPA--EENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKK
        MATEE V+  E V E    E    E NP     K K  KE K KKPAA RK    PTHPPY EMIKDAIV+LKERTGSSQ+AITKFIEEKQK LP NFKK
Subjt:  MATEEAVVPVESVAEPIIAEPA--EENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKK

Query:  LLLFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAA--KPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKP-------
        LLL  LKK VAS KLVKVK+S+KL S  S+ +    PAKKKPAAA  KP AK  AA K  AK  AK K AAK KP   AKP  K K AAK KP       
Subjt:  LLLFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAA--KPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKP-------

Query:  APAKPKSSAVAKPKAATKTRAAP-------KPKAK---VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        A AKPK++A AKPKAA K +AAP       KP  K     AK A+T+TRT+P RKA AP+  P K   VKKAPAK+     VKSPAKKA  KRG+K
Subjt:  APAKPKSSAVAKPKAATKTRAAP-------KPKAK---VPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein5.0e-3452.04Show/hide
Query:  PIIAEPAEENPENNDAKVKKAKEPKEKKP-AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVASGKLV
        P+     E+ P     K K  KE KEKK  AAA K R   +HP YEEMIKDAIV+LKERTGSSQYAI KFIEEK+K+LPP F+KLLL +LK+LVASGKLV
Subjt:  PIIAEPAEENPENNDAKVKKAKEPKEKKP-AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVASGKLV

Query:  KVKSSFKLKSARSEASKP------DAPAKKKP---AAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVAKPKAA
        KVK+SFKL SA ++AS P       APAKKKP   A  K K K  AA KA      KPK AA  K    AK KP P+A A                  AA
Subjt:  KVKSSFKLKSARSEASKP------DAPAKKKP---AAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVAKPKAA

Query:  TKTRAA-PKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKS-PKAKKVKSPAKKAAAK
        TK +A   KPKAK  PAKAA+T+  TSP +KA A           KK P K   K K VKSPAK+A+++
Subjt:  TKTRAA-PKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKS-PKAKKVKSPAKKAAAK

AT2G18050.1 histone H1-38.6e-1040.91Show/hide
Query:  KKPAAARKPRNP--PTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQ-LPPNFKKLLLFHLKKLVASGKLVKVKSSFKLKSA-------RSEASK
        KK  AA+KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+KL          + + +K
Subjt:  KKPAAARKPRNP--PTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQ-LPPNFKKLLLFHLKKLVASGKLVKVKSSFKLKSA-------RSEASK

Query:  PDAPAKKKPAAAKPKAKAPAAKKAVA--KAPAKPKVAAKPKPKTAAKPKPKPKA
         +   + K    + ++ +   KK V+  K   K KV    +PK+      K KA
Subjt:  PDAPAKKKPAAAKPKAKAPAAKKAVA--KAPAKPKVAAKPKPKTAAKPKPKPKA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein3.0e-3956.79Show/hide
Query:  MATEEAVVP--VESVAEPIIAEPAEENPENNDAKVKKAKEPK-EKKP---AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP
        M+ EE  VP  V+S A     +  E+ P     K KK    K  KKP   AA  K +   +HP YEEMIKDAIV+LKERTGSSQYAI KFIEEK K LPP
Subjt:  MATEEAVVP--VESVAEPIIAEPAEENPENNDAKVKKAKEPK-EKKP---AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEAS-KPDAPAKKK-PAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKP--A
         F+KLLL +LK+LVAS KLVKVK+SFK+ SARS A+ KP AP KKK    AKPK K      A A APAK K AAK   K AAK   K K  AKPK    
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEAS-KPDAPAKKK-PAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKP--A

Query:  PAKPKSSAVAKPKAATKTRA-APKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
         AKPKS +VA   A +KT+A A KPKAK  PAKA+RTSTRTSPG+K  AP    KK    KKAPAKS    KVKSPAK+A+ ++ KK
Subjt:  PAKPKSSAVAKPKAATKTRA-APKPKAKV-PAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein7.8e-2744.13Show/hide
Query:  MATEEAVVP--VESVAEPIIAEPAEENPENNDAKVKKAKEPK-EKKP---AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP
        M+ EE  VP  V+S A     +  E+ P     K KK    K  KKP   AA  K +   +HP YEEMIKDAIV+LKERTGSSQYAI KFIEEK K LPP
Subjt:  MATEEAVVP--VESVAEPIIAEPAEENPENNDAKVKKAKEPK-EKKP---AAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPP

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKP
         F+KLLL +LK+LVAS KLVKVK+SFK+ SARS                                              AA PKP          AP K 
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKP

Query:  KSSAVAKPKAATKTRAAPKPKAKVPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK
        K++ VAKP                  KA+RTSTRTSPG+K  AP    KK    KKAPAKS    KVKSPAK+A+ ++ KK
Subjt:  KSSAVAKPKAATKTRAAPKPKAKVPAKAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGAGGAAGCTGTCGTGCCGGTGGAGTCTGTGGCGGAGCCGATCATCGCCGAACCGGCGGAAGAGAATCCGGAGAACAACGACGCGAAGGTGAAGAAGGCTAA
AGAACCGAAAGAGAAGAAGCCTGCTGCTGCTAGAAAACCTAGAAACCCTCCCACTCATCCTCCCTATGAAGAGATGATTAAGGATGCGATTGTTTCGCTCAAGGAGAGGA
CTGGTTCGAGTCAGTATGCGATCACCAAGTTCATCGAGGAGAAGCAAAAGCAGCTTCCTCCCAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTCGCTTCC
GGGAAGTTGGTGAAGGTTAAGAGTTCATTCAAGCTGAAGTCCGCGAGGTCTGAGGCTTCCAAACCTGACGCTCCTGCCAAGAAGAAGCCTGCAGCTGCCAAGCCCAAAGC
TAAAGCCCCCGCCGCCAAGAAGGCTGTTGCTAAAGCTCCAGCGAAGCCTAAGGTGGCTGCCAAGCCGAAGCCAAAAACTGCCGCTAAGCCCAAGCCCAAGCCCAAGGCTG
CTGCTAAACCCAAGCCTGCACCTGCGAAGCCAAAGAGCAGTGCTGTTGCGAAACCTAAAGCTGCAACGAAGACCAGAGCTGCTCCGAAGCCGAAGGCCAAGGTGCCTGCC
AAGGCTGCTAGGACATCGACCAGAACCTCGCCGGGAAGGAAGGCACCGGCTCCGAGACCGGCGCCGAAGAAAGCACCGGCGGTCAAGAAGGCACCGGCGAAGAGTCCGAA
GGCTAAGAAAGTGAAATCTCCGGCGAAAAAGGCTGCGGCTAAAAGAGGAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
GCAACTAAATTACCAGTAAGATTTTCTCTTTCCCTCTAGATCCCAATTTCTTCTCCACAATCCCCGCTTTCCAATTCAACTCATAAACCCTAATTCTACGCTCCAGATTT
TGATCTTGTTCCCACTGCAATGGCGACTGAGGAAGCTGTCGTGCCGGTGGAGTCTGTGGCGGAGCCGATCATCGCCGAACCGGCGGAAGAGAATCCGGAGAACAACGACG
CGAAGGTGAAGAAGGCTAAAGAACCGAAAGAGAAGAAGCCTGCTGCTGCTAGAAAACCTAGAAACCCTCCCACTCATCCTCCCTATGAAGAGATGATTAAGGATGCGATT
GTTTCGCTCAAGGAGAGGACTGGTTCGAGTCAGTATGCGATCACCAAGTTCATCGAGGAGAAGCAAAAGCAGCTTCCTCCCAACTTTAAGAAGCTTTTGTTATTCCATTT
GAAGAAACTTGTCGCTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCATTCAAGCTGAAGTCCGCGAGGTCTGAGGCTTCCAAACCTGACGCTCCTGCCAAGAAGAAGCCTG
CAGCTGCCAAGCCCAAAGCTAAAGCCCCCGCCGCCAAGAAGGCTGTTGCTAAAGCTCCAGCGAAGCCTAAGGTGGCTGCCAAGCCGAAGCCAAAAACTGCCGCTAAGCCC
AAGCCCAAGCCCAAGGCTGCTGCTAAACCCAAGCCTGCACCTGCGAAGCCAAAGAGCAGTGCTGTTGCGAAACCTAAAGCTGCAACGAAGACCAGAGCTGCTCCGAAGCC
GAAGGCCAAGGTGCCTGCCAAGGCTGCTAGGACATCGACCAGAACCTCGCCGGGAAGGAAGGCACCGGCTCCGAGACCGGCGCCGAAGAAAGCACCGGCGGTCAAGAAGG
CACCGGCGAAGAGTCCGAAGGCTAAGAAAGTGAAATCTCCGGCGAAAAAGGCTGCGGCTAAAAGAGGAAAGAAGTAAAGAAAAGAGATAAACGGTAGCGTTCGTAGCGGC
GGTCCTGTAAATCCGTTATCCTTGTGGGTGTATAGACCCTTACATGCCGAGCTATAGAGGAGTTTACTTTGACTTTTCGAATTTTACTTTTATTTGTTTATTTGTAGACC
TTTTTTCCTAAGATGATGTATCTCGCCCAGCTTAGTTTTTAATGGAAATTGAAATTCTGTGATCAATTAGGAGCAACCTGTGATTTCTCCTGCCAATCCGACTTCCTCAA
ATACTTGCAAATGTTTCGTTTCTCTTACGCTTGAAATGGGTCTGGATTGCGTAGCCGAAGTCTGGAGCTTTGTTGCTAAATTTGGTAAATCTATATCCTTCTTTCAACTT
CTCGTTACCAAATCCCTGTTTGTGTTGTTCCAATTTCGCCTTATTTCTGTCTTGGTAATGTATTTTAGAGAGCTAGCTCATAACTATATTTGGGTAGCTATATAATTGTG
TTTGCCTCAAGGGTTTGATCACATACGAG
Protein sequenceShow/hide protein sequence
MATEEAVVPVESVAEPIIAEPAEENPENNDAKVKKAKEPKEKKPAAARKPRNPPTHPPYEEMIKDAIVSLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVAS
GKLVKVKSSFKLKSARSEASKPDAPAKKKPAAAKPKAKAPAAKKAVAKAPAKPKVAAKPKPKTAAKPKPKPKAAAKPKPAPAKPKSSAVAKPKAATKTRAAPKPKAKVPA
KAARTSTRTSPGRKAPAPRPAPKKAPAVKKAPAKSPKAKKVKSPAKKAAAKRGKK