; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000565 (gene) of Chayote v1 genome

Gene IDSed0000565
OrganismSechium edule (Chayote v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationLG13:20571011..20571489
RNA-Seq ExpressionSed0000565
SyntenySed0000565
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003680 - AT DNA binding (molecular function)
InterPro domainsIPR014476 - AT-hook motif nuclear-localized protein 15-29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591696.1 AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2062.5Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP
        LAGPQGQIFGG VA SLI AG VYVIA SFN P Y +L S +EVK        +   PISG    E+ AAT    LLPMYSTHSSS++IWTPAARQ   P
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP

Query:  HHRQ
        HHRQ
Subjt:  HHRQ

KAG7024578.1 AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2062.5Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP
        LAGPQGQIFGG VA SLI AG VYVIA SFN P Y +L S +EVK        +   PISG    E+ AAT    LLPMYSTHSSS++IWTPAARQ   P
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP

Query:  HHRQ
        HHRQ
Subjt:  HHRQ

XP_008466166.1 PREDICTED: AT-hook motif nuclear-localized protein 17-like [Cucumis melo]1.5e-1960.19Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL
        LAGPQGQIFGG VA SLIG G VYVIA SFN P Y +L S +EV+        +   PISG    EN AA  A +   LLPMYSTHSSS++IWTPAARQ 
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL

Query:  P---HHRQ
        P   HHRQ
Subjt:  P---HHRQ

XP_022936802.1 AT-hook motif nuclear-localized protein 17-like [Cucurbita moschata]1.1e-2062.5Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP
        LAGPQGQIFGG VA SLI AG VYVIA SFN P Y +L S +EVK        +   PISG    E+ AAT    LLPMYSTHSSS++IWTPAARQ   P
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP

Query:  HHRQ
        HHRQ
Subjt:  HHRQ

XP_023536056.1 AT-hook motif nuclear-localized protein 17-like [Cucurbita pepo subsp. pepo]6.2e-2162.5Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQL--P
        LAGPQGQIFGG VA SLI AG VYVIA SFN P Y +L S +EVK        +   PISG    E+ AAT    LLPMYSTHSSS++IWTPAARQ   P
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQL--P

Query:  HHRQ
        HHRQ
Subjt:  HHRQ

TrEMBL top hitse value%identityAlignment
A0A0A0LJP1 PPC domain-containing protein9.7e-2059.05Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL
        LAGPQGQIFGG VA SLIG G VYVIA SFN P Y +L S +EV+        +   PISG    EN AA  A++   LLPMYSTHSSS++IWTPAARQ 
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL

Query:  PHHRQ
         HH +
Subjt:  PHHRQ

A0A1S3CRZ9 AT-hook motif nuclear-localized protein 17-like7.4e-2060.19Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL
        LAGPQGQIFGG VA SLIG G VYVIA SFN P Y +L S +EV+        +   PISG    EN AA  A +   LLPMYSTHSSS++IWTPAARQ 
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL

Query:  P---HHRQ
        P   HHRQ
Subjt:  P---HHRQ

A0A5A7VHI8 AT-hook motif nuclear-localized protein 17-like7.4e-2060.19Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL
        LAGPQGQIFGG VA SLIG G VYVIA SFN P Y +L S +EV+        +   PISG    EN AA  A +   LLPMYSTHSSS++IWTPAARQ 
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAED---LLPMYSTHSSSNLIWTPAARQL

Query:  P---HHRQ
        P   HHRQ
Subjt:  P---HHRQ

A0A6J1F9E3 AT-hook motif nuclear-localized protein 17-like5.2e-2162.5Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP
        LAGPQGQIFGG VA SLI AG VYVIA SFN P Y +L S +EVK        +   PISG    E+ AAT    LLPMYSTHSSS++IWTPAARQ   P
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP

Query:  HHRQ
        HHRQ
Subjt:  HHRQ

A0A6J1II56 AT-hook motif nuclear-localized protein 17-like1.3e-1961.17Show/hide
Query:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP
        LAGPQGQIFGG VA SLI AG VYVIA SFN P Y +L S +EVK        +   PISG    E+ A T    LLPMYSTHSSS++IWTPAARQ   P
Subjt:  LAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK--------DQSPPISG----ENAAATVAEDLLPMYSTHSSSNLIWTPAARQ--LP

Query:  HHR
        HHR
Subjt:  HHR

SwissProt top hitse value%identityAlignment
O49662 AT-hook motif nuclear-localized protein 249.4e-0437.5Show/hide
Query:  SMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPPISG
        S + LPP +      L+  LAG QGQ+ GG V   L+ AG V V+A SF+   Y +L   E+  +   P+ G
Subjt:  SMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPPISG

Q6DBQ1 AT-hook motif nuclear-localized protein 253.2e-0443.28Show/hide
Query:  TILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPP
        T LPP +      L   LAG QGQ+ GG VA SLI +G V ++A SF   +Y +L   EE   ++PP
Subjt:  TILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPP

Q9LTA2 AT-hook motif nuclear-localized protein 171.8e-1545.08Show/hide
Query:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK---------DQSPPI------SGENAAATVAEDLL
        P  ++ PP S+   +S    LAGPQGQI GGFVA  LI AG VYVIA SFN P YH+L + EE K          QSPP+      SG+ A +      +
Subjt:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK---------DQSPPI------SGENAAATVAEDLL

Query:  PMYSTH-SSSNLIWTPAARQLP
         MYS H   S++IW P AR  P
Subjt:  PMYSTH-SSSNLIWTPAARQLP

Q9M9R4 AT-hook motif nuclear-localized protein 281.0e-1038.39Show/hide
Query:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNE---------EVKDQSPPISGENAAATVAEDLLPMYSTH
        P  ++ PP S+   +S    LAGPQG++ GGFVA  L+ AG VY +A SF  P YH+L + E         E + QSPP+SG    +        MY   
Subjt:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNE---------EVKDQSPPISGENAAATVAEDLLPMYSTH

Query:  SSSNLIWTPAAR
          S++IW P A+
Subjt:  SSSNLIWTPAAR

Arabidopsis top hitse value%identityAlignment
AT1G14490.1 Predicted AT-hook DNA-binding family protein7.4e-1238.39Show/hide
Query:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNE---------EVKDQSPPISGENAAATVAEDLLPMYSTH
        P  ++ PP S+   +S    LAGPQG++ GGFVA  L+ AG VY +A SF  P YH+L + E         E + QSPP+SG    +        MY   
Subjt:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNE---------EVKDQSPPISGENAAATVAEDLLPMYSTH

Query:  SSSNLIWTPAAR
          S++IW P A+
Subjt:  SSSNLIWTPAAR

AT2G35270.1 Predicted AT-hook DNA-binding family protein1.5e-0442.62Show/hide
Query:  SMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNE
        S + LPP +     SL   LAG QGQ+ GG V   L+ AG V V+A SF    Y +L  +E
Subjt:  SMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNE

AT4G22810.1 Predicted AT-hook DNA-binding family protein6.7e-0537.5Show/hide
Query:  SMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPPISG
        S + LPP +      L+  LAG QGQ+ GG V   L+ AG V V+A SF+   Y +L   E+  +   P+ G
Subjt:  SMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPPISG

AT4G35390.1 AT-hook protein of GA feedback 12.3e-0543.28Show/hide
Query:  TILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPP
        T LPP +      L   LAG QGQ+ GG VA SLI +G V ++A SF   +Y +L   EE   ++PP
Subjt:  TILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPP

AT5G49700.1 Predicted AT-hook DNA-binding family protein1.3e-1645.08Show/hide
Query:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK---------DQSPPI------SGENAAATVAEDLL
        P  ++ PP S+   +S    LAGPQGQI GGFVA  LI AG VYVIA SFN P YH+L + EE K          QSPP+      SG+ A +      +
Subjt:  PSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVK---------DQSPPI------SGENAAATVAEDLL

Query:  PMYSTH-SSSNLIWTPAARQLP
         MYS H   S++IW P AR  P
Subjt:  PMYSTH-SSSNLIWTPAARQLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAGCTTTCAACATGTTTCCAAAGCTCCACTTTGCAACTCGGCCGTCCATGACGATTCTACCGCCATACTCCTCAGAGATCCGGCTGTCGTTGGCGACGGCTCT
AGCAGGGCCGCAGGGCCAAATCTTCGGCGGATTTGTAGCCAGATCTTTAATCGGCGCCGGAATTGTCTATGTAATTGCCGGTTCATTCAACCGTCCATTGTATCATCAGC
TAACATCAAATGAAGAGGTCAAAGACCAATCGCCGCCGATCTCCGGTGAAAACGCTGCCGCCACTGTCGCCGAGGATTTATTGCCGATGTACAGTACACATTCGTCCTCC
AACCTAATATGGACTCCGGCCGCGAGACAGCTGCCGCACCACCGCCAGTTGCGGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAGCTTTCAACATGTTTCCAAAGCTCCACTTTGCAACTCGGCCGTCCATGACGATTCTACCGCCATACTCCTCAGAGATCCGGCTGTCGTTGGCGACGGCTCT
AGCAGGGCCGCAGGGCCAAATCTTCGGCGGATTTGTAGCCAGATCTTTAATCGGCGCCGGAATTGTCTATGTAATTGCCGGTTCATTCAACCGTCCATTGTATCATCAGC
TAACATCAAATGAAGAGGTCAAAGACCAATCGCCGCCGATCTCCGGTGAAAACGCTGCCGCCACTGTCGCCGAGGATTTATTGCCGATGTACAGTACACATTCGTCCTCC
AACCTAATATGGACTCCGGCCGCGAGACAGCTGCCGCACCACCGCCAGTTGCGGATTTGA
Protein sequenceShow/hide protein sequence
MQKAFNMFPKLHFATRPSMTILPPYSSEIRLSLATALAGPQGQIFGGFVARSLIGAGIVYVIAGSFNRPLYHQLTSNEEVKDQSPPISGENAAATVAEDLLPMYSTHSSS
NLIWTPAARQLPHHRQLRI