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Sed0000572 (gene) of Chayote v1 genome

Gene IDSed0000572
OrganismSechium edule (Chayote v1)
Descriptionhydroxyproline-rich glycoprotein family protein
Genome locationLG13:20337079..20339979
RNA-Seq ExpressionSed0000572
SyntenySed0000572
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037699 - Uncharacterized protein At5g65660-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591711.1 hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia]7.1e-4471.76Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF
        MEYDD EAQ  +SLSFPVGLVLLLTF FC+CC FSCCLHWEKLRS+L     +DHR P IPPE  AFSPP K S +HTIWKENR +SL+VLMPGDEVPRF
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF

Query:  IAMACPPPGTAAAATVVEVVVQKTSQSIPDS
        IAMACPP G   AA +VE+V+QK SQSI ++
Subjt:  IAMACPPPGTAAAATVVEVVVQKTSQSIPDS
XP_008466113.1 PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]2.1e-4373.13Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPEN--AAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVP
        MEYD+ EAQ P+SLSFPVGLVLLLTF FC+CC F CCLHWEKLRS L   D   H  PPIPP +  AA SPP K S +HTIWKENR QS+SVLMPGDEVP
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPEN--AAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVP

Query:  RFIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
        RFIA+ACPP  TAAAA +VE+VVQK SQSI DSS
Subjt:  RFIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
XP_022936981.1 uncharacterized protein At5g65660-like [Cucurbita moschata]1.2e-4373.44Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF
        MEYDD EAQ  +SLSFPVGLVLLLTF FC+CC FSCCLHWEKLRS+L     +DHR P IPPE  AFSPP K S +HTIWKENR +SL+VLMPGDEVPRF
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF

Query:  IAMACPPPGTAAAATVVEVVVQKTSQSI
        IAMACPP G   AA +VE+V+QK SQSI
Subjt:  IAMACPPPGTAAAATVVEVVVQKTSQSI
XP_022975977.1 uncharacterized protein At5g65660-like [Cucurbita maxima]3.5e-4373.44Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF
        MEYDD EAQ  +SLSFPVGLVLLLTF FC+CC FSCCLHWEKLRS+L     SDH  P IPPE  AFSPP K S +HTIWKENR +SL+VLMPGDEVPRF
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF

Query:  IAMACPPPGTAAAATVVEVVVQKTSQSI
        IAMACPP G   AA +VE+V+QK SQSI
Subjt:  IAMACPPPGTAAAATVVEVVVQKTSQSI
XP_038899315.1 uncharacterized protein At5g65660-like [Benincasa hispida]4.9e-4574.44Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPENAAFSPPYKTSLLHT-IWKENRAQSLSVLMPGDEVPR
        MEYD+ EAQ P+SLSFPVGLVLLLTF FC+CC FSCCLHWEKLRS L   D   H  PPIPP+ AAFSPP K S +HT IW+ENR QSLSVLMPGDEVPR
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPENAAFSPPYKTSLLHT-IWKENRAQSLSVLMPGDEVPR

Query:  FIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
        FIAMACPP    AAA +VE+VVQK SQS PDSS
Subjt:  FIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
TrEMBL top hitse value%identityAlignment
A0A1S3CQS4 uncharacterized protein At5g65660-like1.0e-4373.13Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPEN--AAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVP
        MEYD+ EAQ P+SLSFPVGLVLLLTF FC+CC F CCLHWEKLRS L   D   H  PPIPP +  AA SPP K S +HTIWKENR QS+SVLMPGDEVP
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPEN--AAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVP

Query:  RFIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
        RFIA+ACPP  TAAAA +VE+VVQK SQSI DSS
Subjt:  RFIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
A0A5D3E545 Uncharacterized protein1.0e-4373.13Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPEN--AAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVP
        MEYD+ EAQ P+SLSFPVGLVLLLTF FC+CC F CCLHWEKLRS L   D   H  PPIPP +  AA SPP K S +HTIWKENR QS+SVLMPGDEVP
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSD---HRQPPIPPEN--AAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVP

Query:  RFIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
        RFIA+ACPP  TAAAA +VE+VVQK SQSI DSS
Subjt:  RFIAMACPPPGTAAAATVVEVVVQKTSQSIPDSS
A0A6J1CGJ4 uncharacterized protein At5g65660-like7.9e-4170.9Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSDHRQ-PPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRFIA
        M+YDD EAQ P+SLSFPVGLVLLLTFFFC+CC FSCCLHW+KLRS L   DHR  PPIPPENAA SPP K   LHT    N++QSL V+MPGDE PRFIA
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSDHRQ-PPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRFIA

Query:  MACPPPGTA-AAATVVEVVVQKTSQSIPDSSTAL
        MACPP   A AAA  V+V+VQK  QS PDSS AL
Subjt:  MACPPPGTA-AAATVVEVVVQKTSQSIPDSSTAL
A0A6J1F906 uncharacterized protein At5g65660-like5.9e-4473.44Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF
        MEYDD EAQ  +SLSFPVGLVLLLTF FC+CC FSCCLHWEKLRS+L     +DHR P IPPE  AFSPP K S +HTIWKENR +SL+VLMPGDEVPRF
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF

Query:  IAMACPPPGTAAAATVVEVVVQKTSQSI
        IAMACPP G   AA +VE+V+QK SQSI
Subjt:  IAMACPPPGTAAAATVVEVVVQKTSQSI
A0A6J1IEI5 uncharacterized protein At5g65660-like1.7e-4373.44Show/hide
Query:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF
        MEYDD EAQ  +SLSFPVGLVLLLTF FC+CC FSCCLHWEKLRS+L     SDH  P IPPE  AFSPP K S +HTIWKENR +SL+VLMPGDEVPRF
Subjt:  MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLL---RRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRF

Query:  IAMACPPPGTAAAATVVEVVVQKTSQSI
        IAMACPP G   AA +VE+V+QK SQSI
Subjt:  IAMACPPPGTAAAATVVEVVVQKTSQSI
SwissProt top hitse value%identityAlignment
Q9LSK9 Uncharacterized protein At5g656601.7e-1144.21Show/hide
Query:  SLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRFIAMACP--PP
        SL FP+G  LLL   F +  +FSCC HW+K RSL R   + +P    E    S PYK        K+ +  S+ VLMPGD  P+FIA+ CP  PP
Subjt:  SLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRFIAMACP--PP
Arabidopsis top hitse value%identityAlignment
AT5G65660.1 hydroxyproline-rich glycoprotein family protein1.2e-1244.21Show/hide
Query:  SLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRFIAMACP--PP
        SL FP+G  LLL   F +  +FSCC HW+K RSL R   + +P    E    S PYK        K+ +  S+ VLMPGD  P+FIA+ CP  PP
Subjt:  SLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRFIAMACP--PP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTATGATGATCCCGAAGCACAGGCTCCGTCCTCTCTAAGCTTTCCAGTTGGTTTGGTTCTTTTGTTGACATTTTTCTTTTGCATTTGTTGTCTTTTTTCTTGTTG
CCTTCACTGGGAAAAGCTCCGATCATTGCTCCGCCGTTCCGACCACCGTCAACCTCCGATTCCGCCGGAAAACGCCGCCTTCTCGCCGCCCTATAAAACTTCGCTTCTCC
ATACGATATGGAAAGAGAATCGGGCACAGAGCCTTTCGGTGTTGATGCCCGGCGATGAGGTTCCAAGGTTTATAGCAATGGCATGTCCGCCGCCGGGTACGGCGGCTGCA
GCGACGGTGGTGGAGGTTGTTGTACAGAAAACTTCACAGAGTATTCCGGATTCTTCTACAGCTCTCTGTCTTTAA
mRNA sequenceShow/hide mRNA sequence
AATTTCGATATCTCTGCAGAACTTGGAGAAAAGTGGAGAGCTACAAAAATGGAGTATGATGATCCCGAAGCACAGGCTCCGTCCTCTCTAAGCTTTCCAGTTGGTTTGGT
TCTTTTGTTGACATTTTTCTTTTGCATTTGTTGTCTTTTTTCTTGTTGCCTTCACTGGGAAAAGCTCCGATCATTGCTCCGCCGTTCCGACCACCGTCAACCTCCGATTC
CGCCGGAAAACGCCGCCTTCTCGCCGCCCTATAAAACTTCGCTTCTCCATACGATATGGAAAGAGAATCGGGCACAGAGCCTTTCGGTGTTGATGCCCGGCGATGAGGTT
CCAAGGTTTATAGCAATGGCATGTCCGCCGCCGGGTACGGCGGCTGCAGCGACGGTGGTGGAGGTTGTTGTACAGAAAACTTCACAGAGTATTCCGGATTCTTCTACAGC
TCTCTGTCTTTAAGTTAATACTGTATTGTACGCTTTTGTTCATAAATATATAATTTTATATTGTAAATTAATTTGAATTCGATTATTCCCTTTAAATTTTCAAGCAATGT
TCATATTTTTTAGAGTTCATCACTTTGATTTGATTCTTGACGACAAACAAAACGTCAGAGTGTAATTAATTCCTGATATGTAAATGGGG
Protein sequenceShow/hide protein sequence
MEYDDPEAQAPSSLSFPVGLVLLLTFFFCICCLFSCCLHWEKLRSLLRRSDHRQPPIPPENAAFSPPYKTSLLHTIWKENRAQSLSVLMPGDEVPRFIAMACPPPGTAAA
ATVVEVVVQKTSQSIPDSSTALCL