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Sed0000578 (gene) of Chayote v1 genome

Gene IDSed0000578
OrganismSechium edule (Chayote v1)
DescriptionExpansin-like EG45 domain-containing protein
Genome locationLG01:10187489..10188065
RNA-Seq ExpressionSed0000578
SyntenySed0000578
Gene Ontology termsNA
InterPro domainsIPR036908 - RlpA-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585463.1 EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3866.42Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MALQ  ATT+ +L+  F   HI +   DIGTATA+GPPYLPTLC GN +DQFPPGNLFVAVNEGLWD                   P  T+IIEVQVVNF
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIE
        C KSPCPSSFLMSKEAF AIS LPNARLNVEYIE
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIE

XP_022131704.1 EG45-like domain containing protein [Momordica charantia]2.3e-3865.93Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MA+QH         FFF  KHI + LAD+GTATA+GPPYLPTLC GNS+ QFPPGNLFVAVNEGLWD                   P   +IIEVQVVN 
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI
        C KSPCPSSFLMSKEAFTAIS LPNARLNVEYIEI
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI

XP_022951412.1 EG45-like domain containing protein [Cucurbita moschata]3.0e-3866.92Show/hide
Query:  KATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNFCQKSP
        +ATT+ LL+  F   HI +   DIGTATA+GPPYLPTLC GN +DQFPPGNLFVAVNEGLWD                   P  T+IIEVQVVNFC KSP
Subjt:  KATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNFCQKSP

Query:  CPSSFLMSKEAFTAISHLPNARLNVEYIEI
        CPSSFLMSKEAF AIS LPNARLNVEYIEI
Subjt:  CPSSFLMSKEAFTAISHLPNARLNVEYIEI

XP_022961955.1 EG45-like domain containing protein [Cucurbita moschata]9.7e-3762.96Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MALQH   T   L+FF   +HI    ADIGTA  +GPPYLPT C GN+IDQFPPGN FVAVNEGLWD                   P  T+IIEVQVVNF
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI
        C KSPCPSSFLMSKEAF+AIS L +A+LNVEYIEI
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI

XP_023545437.1 EG45-like domain containing protein [Cucurbita pepo subsp. pepo]4.3e-3763.7Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MALQH   T   L+FF   +HI    ADIGTA A+GPPYLPT C GN+IDQFPPGN FVAVNEGLWD                   P  T+IIEVQVVNF
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI
        C KSPCPSSFLMSKEAF+AIS L +A+LNVEYIEI
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI

TrEMBL top hitse value%identityAlignment
A0A6J1BR12 EG45-like domain containing protein1.1e-3865.93Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MA+QH         FFF  KHI + LAD+GTATA+GPPYLPTLC GNS+ QFPPGNLFVAVNEGLWD                   P   +IIEVQVVN 
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI
        C KSPCPSSFLMSKEAFTAIS LPNARLNVEYIEI
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI

A0A6J1GHJ6 EG45-like domain containing protein1.5e-3866.92Show/hide
Query:  KATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNFCQKSP
        +ATT+ LL+  F   HI +   DIGTATA+GPPYLPTLC GN +DQFPPGNLFVAVNEGLWD                   P  T+IIEVQVVNFC KSP
Subjt:  KATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNFCQKSP

Query:  CPSSFLMSKEAFTAISHLPNARLNVEYIEI
        CPSSFLMSKEAF AIS LPNARLNVEYIEI
Subjt:  CPSSFLMSKEAFTAISHLPNARLNVEYIEI

A0A6J1HDP3 EG45-like domain containing protein4.7e-3762.96Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MALQH   T   L+FF   +HI    ADIGTA  +GPPYLPT C GN+IDQFPPGN FVAVNEGLWD                   P  T+IIEVQVVNF
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI
        C KSPCPSSFLMSKEAF+AIS L +A+LNVEYIEI
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI

A0A6J1K9Z5 EG45-like domain containing protein4.7e-3762.96Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MALQH   T   L+FF   + I+   ADIGTA A+GPPYLPT C GN+IDQFPPGN FVAVNEGLWD                   P  T+IIEVQVVNF
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI
        C KSPCPSSFLMSKEAF+AIS L +A+LNVEYIEI
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI

A0A6J1KJT8 EG45-like domain containing protein1.0e-3666.67Show/hide
Query:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF
        MALQ  AT + LL+ FF  KHI +   DIG AT +GPPYLPTLC GN IDQFPPGNLFVAVNEGLWD                   P  T+IIEVQVVN 
Subjt:  MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKA-----------------PPATNIIEVQVVNF

Query:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI
        C KSPCPSSFLMSKEAF AIS LPNARLNVEYIEI
Subjt:  CQKSPCPSSFLMSKEAFTAISHLPNARLNVEYIEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTCAACACAAGGCAACAACAATTGATCTTCTCATCTTCTTCTTCTCCTCCAAACACATTTTCATTGTTCTTGCAGACATTGGCACTGCCACAGCCTTTGGCCC
TCCATATCTCCCCACCCTATGTTATGGGAATAGCATCGACCAGTTCCCACCCGGGAACCTCTTTGTGGCGGTGAATGAAGGGCTCTGGGACAAGGCGCCTCCTGCGACGA
ACATCATCGAAGTTCAGGTGGTGAACTTTTGCCAGAAGTCGCCGTGCCCCTCTTCCTTTCTCATGTCCAAAGAGGCCTTCACTGCTATCTCCCACCTCCCTAATGCTAGA
CTCAATGTCGAATATATCGAGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTCAACACAAGGCAACAACAATTGATCTTCTCATCTTCTTCTTCTCCTCCAAACACATTTTCATTGTTCTTGCAGACATTGGCACTGCCACAGCCTTTGGCCC
TCCATATCTCCCCACCCTATGTTATGGGAATAGCATCGACCAGTTCCCACCCGGGAACCTCTTTGTGGCGGTGAATGAAGGGCTCTGGGACAAGGCGCCTCCTGCGACGA
ACATCATCGAAGTTCAGGTGGTGAACTTTTGCCAGAAGTCGCCGTGCCCCTCTTCCTTTCTCATGTCCAAAGAGGCCTTCACTGCTATCTCCCACCTCCCTAATGCTAGA
CTCAATGTCGAATATATCGAGATATAA
Protein sequenceShow/hide protein sequence
MALQHKATTIDLLIFFFSSKHIFIVLADIGTATAFGPPYLPTLCYGNSIDQFPPGNLFVAVNEGLWDKAPPATNIIEVQVVNFCQKSPCPSSFLMSKEAFTAISHLPNAR
LNVEYIEI