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Sed0000595 (gene) of Chayote v1 genome

Gene IDSed0000595
OrganismSechium edule (Chayote v1)
DescriptionDUF1336 domain-containing protein
Genome locationLG12:3994289..3994832
RNA-Seq ExpressionSed0000595
SyntenySed0000595
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1213284.1 hypothetical protein CJ030_MR5G009621 [Morella rubra]5.4e-1552.48Show/hide
Query:  YEPYSHRR--DRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDI-TKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET
        +E Y   R   RDFW ARR FL SY+FS +    +G K+KLKRS+KELN  A+ +VG I   I +KR+LGIRVYRLT+ LPS+VLV ++CF P      +
Subjt:  YEPYSHRR--DRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDI-TKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET

Query:  T
        T
Subjt:  T

KGN53119.1 hypothetical protein Csa_015375 [Cucumis sativus]2.7e-3067.33Show/hide
Query:  MQSYEPYSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET
        MQ  +    R DRDFWH+R+ FLKSYN S+ Y RDDGLK K+KR+MKELNRS SR+VGGIC D+ KRK GIRVYRLTI LPSMV + ++CF+PSFRN E 
Subjt:  MQSYEPYSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET

Query:  T
        T
Subjt:  T

OMP06294.1 hypothetical protein COLO4_08224 [Corchorus olitorius]2.1e-1449.43Show/hide
Query:  HRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKR--KLGIRVYRLTIGLPSMVLVKMKCFMP
        +R  RD+WHARR FL SY+F  +    +GLK+KLKRS+KELN +A   +   CGD++KR  ++G++V+R+  G PS+ LV M+CF+P
Subjt:  HRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKR--KLGIRVYRLTIGLPSMVLVKMKCFMP

QHN94890.1 uncharacterized protein DS421_18g604930 [Arachis hypogaea]7.1e-1549.43Show/hide
Query:  YSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP
        +S RR  +FW+ARR FLKSY+ S E   + G KEKLK+SMKE+N +A  VV  +   ++K+KLGI+ +++ + +PSMVLV ++CF+P
Subjt:  YSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP

XP_030940520.1 uncharacterized protein LOC115965432 [Quercus lobata]1.2e-1455.95Show/hide
Query:  RRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP
        R DRD+W+ARR FL SY+FS E    +G K KL+RS+KELN  A+ VV  I   ++KRKLGIRVYR T+ L S+VL+ ++CF P
Subjt:  RRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP

TrEMBL top hitse value%identityAlignment
A0A0A0KW75 Uncharacterized protein1.3e-3067.33Show/hide
Query:  MQSYEPYSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET
        MQ  +    R DRDFWH+R+ FLKSYN S+ Y RDDGLK K+KR+MKELNRS SR+VGGIC D+ KRK GIRVYRLTI LPSMV + ++CF+PSFRN E 
Subjt:  MQSYEPYSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET

Query:  T
        T
Subjt:  T

A0A1R3KGY3 Uncharacterized protein1.0e-1449.43Show/hide
Query:  HRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKR--KLGIRVYRLTIGLPSMVLVKMKCFMP
        +R  RD+WHARR FL SY+F  +    +GLK+KLKRS+KELN +A   +   CGD++KR  ++G++V+R+  G PS+ LV M+CF+P
Subjt:  HRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKR--KLGIRVYRLTIGLPSMVLVKMKCFMP

A0A444Y8G7 Uncharacterized protein3.4e-1549.43Show/hide
Query:  YSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP
        +S RR  +FW+ARR FLKSY+ S E   + G KEKLK+SMKE+N +A  VV  +   ++K+KLGI+ +++ + +PSMVLV ++CF+P
Subjt:  YSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP

A0A6A1VKL6 Uncharacterized protein2.6e-1552.48Show/hide
Query:  YEPYSHRR--DRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDI-TKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET
        +E Y   R   RDFW ARR FL SY+FS +    +G K+KLKRS+KELN  A+ +VG I   I +KR+LGIRVYRLT+ LPS+VLV ++CF P      +
Subjt:  YEPYSHRR--DRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDI-TKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNET

Query:  T
        T
Subjt:  T

A0A7N2MT50 Uncharacterized protein5.9e-1555.95Show/hide
Query:  RRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP
        R DRD+W+ARR FL SY+FS E    +G K KL+RS+KELN  A+ VV  I   ++KRKLGIRVYR T+ L S+VL+ ++CF P
Subjt:  RRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43390.1 unknown protein1.2e-0436.78Show/hide
Query:  EPYSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCF
        E Y+ +  RD    RR  L SY+           KEKL++SMK +N SA R V  +    TKR+  IRV R  +G  S  +  + CF
Subjt:  EPYSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTTATGAACCATATAGTCATCGTCGTGATCGGGACTTTTGGCATGCACGGCGGGACTTTTTGAAGAGCTATAACTTCTCCCATGAATATGGAAGAGATGATGG
CTTGAAAGAAAAATTGAAGAGGTCAATGAAAGAGCTCAATAGATCAGCAAGTAGAGTGGTTGGAGGCATTTGTGGAGATATTACCAAAAGAAAGCTTGGAATTAGGGTTT
ATAGGCTCACAATTGGTCTGCCATCAATGGTTCTTGTGAAAATGAAGTGTTTTATGCCATCTTTTAGGAACAATGAGACCACTCACATGATTAGTTAG
mRNA sequenceShow/hide mRNA sequence
TTTTACCCTATTCAAGCATAACTCAATTGGTCTTGACATTATATATTTAACTAAAAGGGTGTCATGCAAAGTTATGAACCATATAGTCATCGTCGTGATCGGGACTTTTG
GCATGCACGGCGGGACTTTTTGAAGAGCTATAACTTCTCCCATGAATATGGAAGAGATGATGGCTTGAAAGAAAAATTGAAGAGGTCAATGAAAGAGCTCAATAGATCAG
CAAGTAGAGTGGTTGGAGGCATTTGTGGAGATATTACCAAAAGAAAGCTTGGAATTAGGGTTTATAGGCTCACAATTGGTCTGCCATCAATGGTTCTTGTGAAAATGAAG
TGTTTTATGCCATCTTTTAGGAACAATGAGACCACTCACATGATTAGTTAGTACATTCTTAATGTATGACTATGAAATCTCAAACTAGGTGGAAAACTTGTGTGGGTTTT
CGTATTTTTTCAGTTCAAC
Protein sequenceShow/hide protein sequence
MQSYEPYSHRRDRDFWHARRDFLKSYNFSHEYGRDDGLKEKLKRSMKELNRSASRVVGGICGDITKRKLGIRVYRLTIGLPSMVLVKMKCFMPSFRNNETTHMIS