; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000628 (gene) of Chayote v1 genome

Gene IDSed0000628
OrganismSechium edule (Chayote v1)
DescriptionTrafficking protein particle complex subunit
Genome locationLG04:42566901..42572241
RNA-Seq ExpressionSed0000628
SyntenySed0000628
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0030008 - TRAPP complex (cellular component)
GO:0033106 - cis-Golgi network membrane (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR016721 - Bet3 family
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607818.1 Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia]2.7e-7697.97Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNA+V N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WD EGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

XP_022139368.1 trafficking protein particle complex subunit 3 [Momordica charantia]9.2e-7798.65Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETA+VIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

XP_022941300.1 trafficking protein particle complex subunit 3-like [Cucurbita moschata]3.2e-7799.32Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

XP_022981618.1 trafficking protein particle complex subunit 3-like [Cucurbita maxima]4.1e-7798.65Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSI+LEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

XP_038896395.1 trafficking protein particle complex subunit 3 [Benincasa hispida]3.2e-7799.32Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

TrEMBL top hitse value%identityAlignment
A0A0A0LAM3 Trafficking protein particle complex subunit1.3e-7698.65Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

A0A5A7TX50 Trafficking protein particle complex subunit1.3e-7698.65Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

A0A6J1CFG3 Trafficking protein particle complex subunit4.4e-7798.65Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETA+VIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

A0A6J1FT71 Trafficking protein particle complex subunit1.5e-7799.32Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

A0A6J1J2K9 Trafficking protein particle complex subunit2.0e-7798.65Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATV N
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WDAEGTCCSI+LEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

SwissProt top hitse value%identityAlignment
O43617 Trafficking protein particle complex subunit 31.5e-4261.83Show/hide
Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP
        +++++ELFTLTYGA V QL  D E  E+VNKQLD+MG+NIG+RLI++FLA+SN+ RC DF+ETADVIAKV  KM+LG+  ++ NW   G   S++LE+NP
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP

Query:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV
        LVDFVELPD    L Y N+L GV+RGALEMV
Subjt:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV

O55013 Trafficking protein particle complex subunit 35.3e-4362.6Show/hide
Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP
        +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF+ETADVIAKV  KM+LG+  ++ NW   G   S++LE+NP
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP

Query:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV
        LVDFVELPD    L Y N+L GV+RGALEMV
Subjt:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV

Q5U1Z2 Trafficking protein particle complex subunit 35.3e-4362.6Show/hide
Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP
        +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF+ETADVIAKV  KM+LG+  ++ NW   G   S++LE+NP
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP

Query:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV
        LVDFVELPD    L Y N+L GV+RGALEMV
Subjt:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV

Q5ZI57 Trafficking protein particle complex subunit 32.4e-4362.6Show/hide
Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP
        +++N+ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF+ETADVIAK+  KM+LG+  ++ NW   G   S++LE+NP
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSIVLEDNP

Query:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV
        LVDFVELPD    L Y N+L GV+RGALEMV
Subjt:  LVDFVELPDTCQGLHYCNILSGVIRGALEMV

Q86K94 Trafficking protein particle complex subunit 36.7e-4665.71Show/hide
Query:  GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCC
        G+ +F  VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS I RC DF ETA+VIAKVG KMFLGVNA V +WDA     
Subjt:  GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCC

Query:  SIVLEDNPLVDFVELPDTCQ-GLHYCNILSGVIRGALEMV
         + +EDNPL+DFVELPD  +  L+Y NIL GV+RGALEMV
Subjt:  SIVLEDNPLVDFVELPDTCQ-GLHYCNILSGVIRGALEMV

Arabidopsis top hitse value%identityAlignment
AT5G54750.1 Transport protein particle (TRAPP) component6.6e-7386.49Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN
        M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKS +SRCVDFKETA++IAKVG KMFLGV A+V +
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVAN

Query:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
        WD++GTCCSI+LEDNPLVDFVELPDTCQGL+YCN+LSGVIRGALEMVS
Subjt:  WDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS

AT5G54750.2 Transport protein particle (TRAPP) component4.0e-7079.5Show/hide
Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------------GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVG
        M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQM             GYNIGIRLIDEFLAKS +SRCVDFKETA++IAKVG
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------------GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVG

Query:  LKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS
         KMFLGV A+V +WD++GTCCSI+LEDNPLVDFVELPDTCQGL+YCN+LSGVIRGALEMVS
Subjt:  LKMFLGVNATVANWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTGCTGGTCCTCGATCCGGCGACGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCGGAGTTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAATTGCTCAC
GGATCTGGAGGAGGTTGAGGAGGTCAACAAACAGCTCGATCAGATGGGCTATAATATTGGAATCAGGCTGATTGATGAGTTTCTAGCAAAATCTAATATTTCGAGATGTG
TGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTCGGGTTGAAAATGTTTTTGGGAGTGAATGCAACGGTGGCCAACTGGGATGCTGAAGGCACATGCTGCAGTATT
GTTCTAGAAGACAATCCATTGGTAGACTTCGTTGAGCTGCCTGATACTTGTCAAGGTCTACATTACTGCAATATCTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGT
TTCAGGTTCGAGACTCACATGTGACATTACTCCTTGGTTGTCTTTCGGTACCTGGCCTAGGGACGGGCGGGATTACCCTTATTTCAAAAAAAACACACAACCAACCTCCA
TGGGCAGCTTGGTGGTCAAAATGACAATATAA
mRNA sequenceShow/hide mRNA sequence
CGAGCCATAGGCACGAAGGCCATTTGGATCTTGTAGCCCCATAGACCACAAGTCTAACACTGTTCTTCACTTTCTTTAGGCCATTTGGATCCATCATGCCTCCTGCTGGT
CCTCGATCCGGCGACGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCGGAGTTGTTTACCTTGACTTATGGAGCGACTGTTCGTCAATTGCTCACGGATCTGGAGGAGGT
TGAGGAGGTCAACAAACAGCTCGATCAGATGGGCTATAATATTGGAATCAGGCTGATTGATGAGTTTCTAGCAAAATCTAATATTTCGAGATGTGTGGACTTCAAAGAGA
CAGCTGATGTGATTGCAAAGGTCGGGTTGAAAATGTTTTTGGGAGTGAATGCAACGGTGGCCAACTGGGATGCTGAAGGCACATGCTGCAGTATTGTTCTAGAAGACAAT
CCATTGGTAGACTTCGTTGAGCTGCCTGATACTTGTCAAGGTCTACATTACTGCAATATCTTAAGTGGAGTCATCAGAGGAGCACTTGAGATGGTTTCAGGTTCGAGACT
CACATGTGACATTACTCCTTGGTTGTCTTTCGGTACCTGGCCTAGGGACGGGCGGGATTACCCTTATTTCAAAAAAAACACACAACCAACCTCCATGGGCAGCTTGGTGG
TCAAAATGACAATATAAAAACCAAAAGATTGTGGGAATAATCCAGGTGCGTGCAACCTGGAGACATGAATTACGTTGTTTTTCTGATTATATGTTGTTGTGGTGTTGGTG
TTGGGGTCAGGTGTCAATGAAAACAGAAGTAACATGGCTACGAGACATGCTGAAAGGAGACGACACATTCGAATTACAAGTAAAATTGCTGAAGCAAATCCCTGAAGAGT
ACCCATACAAAGACGACGAGTAACATAATAATCTCATTCTCAAACAAACCCTCTTTTATTTCTACTTATCTGCCACTGTTTTTCGTTTGTGTTCATTTGATCTCATATAT
ATAGCTACATTTTGGATTTCTCCAACTAATATCCATTCTATATTATTAAAAGGCAATGAGTCTTAAAACTTTTTTAGACTAAAATATCATTTTAAATTTTAGTTCGCCTT
AAAATATCTTCTTTTTTTCTTTTTTCTTTTTTTTTTATCTCTGTGA
Protein sequenceShow/hide protein sequence
MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVANWDAEGTCCSI
VLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSGSRLTCDITPWLSFGTWPRDGRDYPYFKKNTQPTSMGSLVVKMTI