CuGenDBv2

Gene ID	Sed0000650
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-like protein
Genome location	LG05:42384654..42388265
RNA-Seq Expression	Sed0000650
Synteny	Sed0000650
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0019941 - modification-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0031386 - protein tag (molecular function) GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR019954 - Ubiquitin conserved site IPR019956 - Ubiquitin domain IPR029071 - Ubiquitin-like domain superfamily IPR038738 - Nedd8-like ubiquitin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF5949508.1 hypothetical protein HYC85_011501 [Camellia sinensis]

2.5e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGG+
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY

KAF7139896.1 hypothetical protein RHSIM_Rhsim06G0241500 [Rhododendron simsii]

4.3e-77

100

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGG
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGG

PKA50840.1 Ubiquitin-NEDD8-like protein RUB2 [Apostasia shenzhenica]

1.9e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAK+YNIEGGSVLHLVLALRGGGY
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY

XP_022943496.1 ubiquitin-NEDD8-like protein RUB2 [Cucurbita moschata]

1.5e-77

98.71

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL
        R+KERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL

XP_022948030.1 ubiquitin-NEDD8-like protein RUB2 [Cucurbita moschata]

1.1e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL

TrEMBL top hits

e value

%identity

Alignment

A0A2I0A5N1 Ubiquitin-NEDD8-like protein RUB2

9.4e-78

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAK+YNIEGGSVLHLVLALRGGGY
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY

A0A6J1FRW0 ubiquitin-NEDD8-like protein RUB2

7.2e-78

98.71

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL
        R+KERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL

A0A6J1G8J7 ubiquitin-NEDD8-like protein RUB2

5.5e-78

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL

A0A6J1I1R0 ubiquitin-NEDD8-like protein RUB2

5.5e-78

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGGYL
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL

A0A7J7HCC4 Uncharacterized protein

1.2e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGG+
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY

SwissProt top hits

e value

%identity

Alignment

P0C030 Ubiquitin-NEDD8-like protein RUB1

1.4e-78

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

P0C031 Ubiquitin-NEDD8-like protein RUB2

1.4e-78

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

P0C073 Ubiquitin-NEDD8-like protein RUB1

1.8e-78

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

Q8RUC6 Ubiquitin-NEDD8-like protein RUB2

1.2e-77

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDY IEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

Q9SHE7 Ubiquitin-NEDD8-like protein RUB1

1.4e-78

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

Arabidopsis top hits

e value

%identity

Alignment

AT1G31340.1 related to ubiquitin 1

9.9e-80

99.34

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

AT2G35635.1 ubiquitin 7

8.4e-79

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDY IEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

AT5G03240.1 polyubiquitin 3

1.5e-64

79.87

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY
         +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG +
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY

AT5G03240.2 polyubiquitin 3

1.5e-64

79.87

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY
         +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG +
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY

AT5G20620.1 ubiquitin 4

1.5e-64

79.87

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY
         +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG +
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGATCTTCGTCAAAACCCTAACTGGAAAGACGATCACGCTCGAGGTCGAGAGCAGTGATACAATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCC
TCCAGACCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAGTCAACCCTTCACCTGGTCTTGAGGCTCA
GGGGAGGTACTATGATTAAGGTGAAGACTCTTACCGGTAAGGAAATTGAGATTGACATTGAGCCAACCGACACAATTGATCGTATCAAGGAGCGGGTTGAGGAGAAAGAG
GGGATCCCCCCTGTACAGCAAAGGCTCATTTATGCCGGGAAGCAGCTCGGGGATGACAAAACAGCCAAAGACTACAACATCGAGGGCGGTTCCGTTCTCCATCTAGTGCT
GGCTCTGAGGGGTGGTGGTTACCTCTGA

mRNA sequence

Show/hide mRNA sequence

ATTAAAAGGAAGAATATTTTAACAAAAAAATCAATAAGTAGAGACATTTTGCCCAATTTTCCACGCCTTGATATTTTCCCTTCGTTATCGAGGACGATTTTTCTCTCGCT
CTGTTACTAAAAACTTCGAAGCAGAAACGATGCAGATCTTCGTCAAAACCCTAACTGGAAAGACGATCACGCTCGAGGTCGAGAGCAGTGATACAATCGATAATGTCAAA
GCCAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGA
GTCAACCCTTCACCTGGTCTTGAGGCTCAGGGGAGGTACTATGATTAAGGTGAAGACTCTTACCGGTAAGGAAATTGAGATTGACATTGAGCCAACCGACACAATTGATC
GTATCAAGGAGCGGGTTGAGGAGAAAGAGGGGATCCCCCCTGTACAGCAAAGGCTCATTTATGCCGGGAAGCAGCTCGGGGATGACAAAACAGCCAAAGACTACAACATC
GAGGGCGGTTCCGTTCTCCATCTAGTGCTGGCTCTGAGGGGTGGTGGTTACCTCTGAAACTCTGAATTTTCAGTTTTATTTAGGGATGGATAAATGGAAAAACGTTTAAG
CTTAAACATTTCAAATACTACTCTGTAATAGAGATTTCGCCTGTGTATTTACCTTTTCATGTTCAACATTAAACCATTTGCTCTGCTTGGAAGAAGTTTATAAAATCTAG
TCCCAAAGTTTATCCATTTATGTTGGGGAATGAAGCTTTCCTTTTTTTTCCTATTATACTTGTGACTTTGTTCCGAAAGGAACGGCTTCATTGGTTGAGACTTAGAACCT
TCAAGGTATGTTTTGCTGGAG

Protein sequence

Show/hide protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKE
GIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGYL

Sed0000650 (gene) of Chayote v1 genome