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Sed0000672 (gene) of Chayote v1 genome

Gene IDSed0000672
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:16692626..16692883
RNA-Seq ExpressionSed0000672
SyntenySed0000672
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY27743.1 Uncharacterized protein TCM_029517 [Theobroma cacao]7.8e-1258.21Show/hide
Query:  RWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        RW +FK+ +++ES + K LGS FKWKRL N+Q+SFVD ++F+  S+LEA+ LV  LCFF LC GCHF
Subjt:  RWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

KAG6583910.1 hypothetical protein SDJN03_19842, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2777.65Show/hide
Query:  MDEELGSKKSNSHGHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        MDEE+G+K+S  HG  AT WAIFK+SLRRES KMKLLGS FKWKRLTNLQISF+D L+FK VSMLE VVLV  LCFF LCFGCHF
Subjt:  MDEELGSKKSNSHGHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

KAG7012520.1 hypothetical protein SDJN02_25272, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-2178.57Show/hide
Query:  MDEELGSKKSNSHGHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVL
        MDE++G+K S SHG++ATRWAIFK+SLRRESRKMKLLGS FKWKRLTNLQISF+D ++FKFVS+LE VVL
Subjt:  MDEELGSKKSNSHGHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVL

KAG7019527.1 hypothetical protein SDJN02_18488, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2071.6Show/hide
Query:  MDEELGSKKSNSHGHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLV-----LRLCF
        MDEE+G+K+S  HG  AT WAIFK+SLRRESRKMKLLGS FKWKRLTNLQISF+D L+FK VSMLE VVL+     L LC+
Subjt:  MDEELGSKKSNSHGHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLV-----LRLCF

XP_021294841.1 uncharacterized protein LOC110424571 [Herrania umbratica]5.9e-1255.71Show/hide
Query:  KATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        +  RW +FK+ +++ES + K LGS FKWKRL N+Q+SFVD ++F+  S+LEA+ LV  LCFF LC GCHF
Subjt:  KATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

TrEMBL top hitse value%identityAlignment
A0A061GEB5 Uncharacterized protein3.8e-1258.21Show/hide
Query:  RWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        RW +FK+ +++ES + K LGS FKWKRL N+Q+SFVD ++F+  S+LEA+ LV  LCFF LC GCHF
Subjt:  RWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

A0A5D2KWH9 Uncharacterized protein7.1e-1156.72Show/hide
Query:  RWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        RW +FK+ + +E+ + K  GS FKWKRL N++ SFVD ++FK VS+LEA+ LV  LCFF LC GCHF
Subjt:  RWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

A0A6J1B6L1 uncharacterized protein LOC1104245712.9e-1255.71Show/hide
Query:  KATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        +  RW +FK+ +++ES + K LGS FKWKRL N+Q+SFVD ++F+  S+LEA+ LV  LCFF LC GCHF
Subjt:  KATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

A0A7N2LSF8 Uncharacterized protein4.2e-1155.56Show/hide
Query:  GHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        G K  RW  FK+   + + + K LGS FKWKRL NLQ+SFVD ++F+ +S+ EA+VLV  LCFF LC GCHF
Subjt:  GHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

B9I103 Uncharacterized protein2.4e-1151.11Show/hide
Query:  MDEELGSKKSNSHGHKAT-RWAI--FKQSLRRES--RKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        M+ ++G   ++S G K++ +W I  F++   +ES   ++K +GS FKWKRL N+Q+SF D LIFK VS+LEA+VLV+ LCFF LC GCHF
Subjt:  MDEELGSKKSNSHGHKAT-RWAI--FKQSLRRES--RKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06475.1 unknown protein5.7e-0550Show/hide
Query:  KWKRLTNLQIS-FVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCH
        KWKR+  + ++  VDG+++K + ++EA VLV  LCFF LC GCH
Subjt:  KWKRLTNLQIS-FVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCH

AT5G46295.1 unknown protein1.8e-0644.62Show/hide
Query:  AIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF
        +I+K +  R   K   LG   KWKRL NL+++F++ L ++ +S++EA+VLV +L FF LC GC F
Subjt:  AIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGAGCTGGGTTCGAAGAAAAGCAACAGCCATGGACACAAAGCTACGAGGTGGGCCATTTTCAAGCAATCTCTCAGAAGAGAATCGCGCAAAATGAAGCTGTT
GGGCTCGGTTTTCAAGTGGAAGAGACTCACGAATCTGCAGATTTCTTTCGTGGATGGTTTGATTTTCAAATTCGTTTCTATGTTGGAGGCTGTGGTTCTCGTTCTTCGAC
TCTGTTTTTTCTTGCTCTGTTTTGGATGTCACTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAGAGCTGGGTTCGAAGAAAAGCAACAGCCATGGACACAAAGCTACGAGGTGGGCCATTTTCAAGCAATCTCTCAGAAGAGAATCGCGCAAAATGAAGCTGTT
GGGCTCGGTTTTCAAGTGGAAGAGACTCACGAATCTGCAGATTTCTTTCGTGGATGGTTTGATTTTCAAATTCGTTTCTATGTTGGAGGCTGTGGTTCTCGTTCTTCGAC
TCTGTTTTTTCTTGCTCTGTTTTGGATGTCACTTTTGA
Protein sequenceShow/hide protein sequence
MDEELGSKKSNSHGHKATRWAIFKQSLRRESRKMKLLGSVFKWKRLTNLQISFVDGLIFKFVSMLEAVVLVLRLCFFLLCFGCHF