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Sed0000673 (gene) of Chayote v1 genome

Gene IDSed0000673
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Genome locationLG02:46625558..46629159
RNA-Seq ExpressionSed0000673
SyntenySed0000673
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141152.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]8.1e-4290.53Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKN+KELRILLCQ+SPSSAPARAFVEKNYKDLK  NP+FPILIRECSG++PQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]2.8e-4291.58Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKN+KELRILLCQ+SPSSAPARAFVEKNYKDLK  NP+FPILIRECSG++PQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_022152373.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia]1.6e-4293.68Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKN+KELRILLCQTSPSSAPARAFVEKNYKDLK+ NP+FPILIRECSGV+PQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]2.1e-4292.63Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKN+KELRILLCQTSPSSAPARAFVEKNYK+LK  NP+FPILIRECSGV+PQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]4.7e-4292.63Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKN+KELRILLCQ+SPSSAPAR FVEKNYKDLK  NP+FPILIRECSGV+PQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein3.9e-4290.53Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKN+KELRILLCQ+SPSSAPARAFVEKNYKDLK  NP+FPILIRECSG++PQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.3e-4291.58Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKN+KELRILLCQ+SPSSAPARAFVEKNYKDLK  NP+FPILIRECSG++PQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 21.3e-4291.58Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKN+KELRILLCQ+SPSSAPARAFVEKNYKDLK  NP+FPILIRECSG++PQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1DEP8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 27.9e-4393.68Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKN+KELRILLCQTSPSSAPARAFVEKNYKDLK+ NP+FPILIRECSGV+PQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like1.0e-4292.63Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKN+KELRILLCQTSPSSAPARAFVEKNYK+LK  NP+FPILIRECSGV+PQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.0e-1852.94Show/hide
Query:  MKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        ++E+RI LCQ SP S   R F+EK Y +LK +NP  PILIRECS VQP+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  MKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

P0CB80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.0e-1852.94Show/hide
Query:  MKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        ++E+RI LCQ SP S   R F+EK Y +LK +NP  PILIRECS VQP+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  MKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.9e-1851.72Show/hide
Query:  RGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLV
        RG+L   ++E+RI LCQ SP S   R F+EK Y +LK +NP  PILIRECS VQP+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  RGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLV

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.1e-1752.5Show/hide
Query:  MKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLV
        ++E+RI LCQ SP S   R F+EK Y +LK +NP  PILIRECS VQP+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  MKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLV

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.1e-3776.84Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK+MKELRILLCQ+SP+SAP R FVEKNYKDLK+ NP+ PILIRECSGVQPQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative1.5e-3876.84Show/hide
Query:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK+MKELRILLCQ+SP+SAP R FVEKNYKDLK+ NP+ PILIRECSGVQPQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGGAGAGGGCAGCTATCGAAGAACATGAAGGAGCTTCGAATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAGAAGAATTATAA
GGATCTCAAGGCTTCGAATCCCAGATTTCCCATTTTGATCCGCGAATGCAGCGGAGTCCAGCCCCAATTATGGGCTCGATATGACATGGGCGTTGAGAGGGTTGCTCGTC
TTGAGGGGTTGAGCGAGGCGCAGATCTCGAAAGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
CTTAGATAATAATGTGGTTCGTGGACTGACCTGCGACATCACTCCTTTTTCGATATCTCAGTGTCCGGTCTAGAGACTGAGTGTCAATACCCTTTCTTTCAAAAATTAAT
TTTGGTTTGTAGACCGATTTACGTTGAGAAAAAATACACAAAAACAACCAAATTCCATAGTTGCTATGCCTGAATAGGGCGTTTGGGAGGGTGGGCGGCGATTGACGAAG
AGCGAAGAAGAGAAAAAATGGCGTGGAGAGGGCAGCTATCGAAGAACATGAAGGAGCTTCGAATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCCGCTAGGGCATTT
GTGGAGAAGAATTATAAGGATCTCAAGGCTTCGAATCCCAGATTTCCCATTTTGATCCGCGAATGCAGCGGAGTCCAGCCCCAATTATGGGCTCGATATGACATGGGCGT
TGAGAGGGTTGCTCGTCTTGAGGGGTTGAGCGAGGCGCAGATCTCGAAAGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGAAGGAGTAATCTGCTGTGCTTTTGTA
CTTCGCAACATACATCAATAAATGCACGAGTGGAACTTTGTTGAGATGCTTTTCTGTTTACATTCTTCTGTTCGCTCAGCTTTTTTGAGATTATTGCTAAAATATTCAGC
CTGAGAAAACATATTTCTGGTACGTATGTTATGGCTATTTGTTTATATAAATAGTTTCTCCGGGAGTTATTTTCATAATGAGTTTCTTATTTTTCTTAAAGAACTGATCG
CATTAATTATATAGAATTAAAGTTAGAAAA
Protein sequenceShow/hide protein sequence
MAWRGQLSKNMKELRILLCQTSPSSAPARAFVEKNYKDLKASNPRFPILIRECSGVQPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS