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Sed0000681 (gene) of Chayote v1 genome

Gene IDSed0000681
OrganismSechium edule (Chayote v1)
DescriptionAWPM-19-like family protein
Genome locationLG04:34639396..34640461
RNA-Seq ExpressionSed0000681
SyntenySed0000681
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR008390 - AWPM-19-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147191.1 membrane protein PM19L [Cucumis sativus]1.2e-6374.44Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +Y ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTF ML  VLGIASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL FTQL Y+LLLHAGIFS RYGPGY DTDYGMGG + A GEPPKG  GTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

XP_008460698.1 PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]4.2e-6475Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +Y ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTF ML  VLGIASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL FTQL Y+LLLHAGIFS RYGPGY DTDYGMGG + A GEPPKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

XP_022959288.1 uncharacterized protein LOC111460317 [Cucurbita moschata]5.5e-6474.44Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +YFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTF ML  V+G+ASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL  TQL Y+LLLHAGIFS RYGPGY DTDYGMGG +   GEPPKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

XP_023549469.1 membrane protein PM19L [Cucurbita pepo subsp. pepo]2.5e-6475Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +YFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTF ML  V+G+ASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL  TQL Y+LLLHAGIFS RYGPGY DTDYGMGG S   GEPPKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

XP_038874443.1 membrane protein PM19L [Benincasa hispida]5.5e-6473.89Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLF+NL +Y IL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTF ML  VLG+ASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL FTQL Y+LLLHAGIFS RYGPGY DTDYGMGG + A GEPPKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

TrEMBL top hitse value%identityAlignment
A0A0A0LI45 Uncharacterized protein5.9e-6474.44Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +Y ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTF ML  VLGIASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL FTQL Y+LLLHAGIFS RYGPGY DTDYGMGG + A GEPPKG  GTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

A0A1S3CDH8 uncharacterized protein LOC1034994662.0e-6475Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +Y ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTF ML  VLGIASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL FTQL Y+LLLHAGIFS RYGPGY DTDYGMGG + A GEPPKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

A0A6J1CDE2 uncharacterized protein LOC1110097051.9e-6273.33Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +YFIL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTF ML  VLG+ASKLAGLYH+RAWRSDSLAGAGS S++TWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL  TQL YILLLHAGIFS  YGPGYR+TDYGMGG  TAAGE PKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

A0A6J1H5I7 uncharacterized protein LOC1114603172.7e-6474.44Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +YFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTF ML  V+G+ASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL  TQL Y+LLLHAGIFS RYGPGY DTDYGMGG +   GEPPKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

A0A6J1KYX7 uncharacterized protein LOC1114988584.7e-6172.78Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--
        MAQTMGRNMAAPLLFLNL +YFILLGFASWCINRYINGTTYHPSMGG+  TPFFLTF ML  V+G+ASKLAGLYH+RAWRSDSLAGAGSTSLLTWAVT  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVT--

Query:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV
                               A IIIL  TQL Y+LLLHAGIFS RYGPGY DTDYGMGG +   GEPPKG AGTRVV
Subjt:  -----------------------ALIIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV

SwissProt top hitse value%identityAlignment
Q6L4D2 Membrane protein PM19L5.9e-2945.95Show/hide
Query:  MGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVTAL----
        +GR M APLL LNL +Y I++GFASW +N YING T HP + GNGAT +FL F +L  V+G ASKLAG++H+R+W + SLA   +++L+ WA+TAL    
Subjt:  MGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVTAL----

Query:  ---------------------IIILMFTQLFYILLLHAGIFSPRYGPG
                             +IIL FTQL Y+ +LH G+FS  +  G
Subjt:  ---------------------IIILMFTQLFYILLLHAGIFSPRYGPG

Arabidopsis top hitse value%identityAlignment
AT1G04560.1 AWPM-19-like family protein1.7e-4758.39Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVTAL
        MA T+GRN+AAPLLFLNL +Y I+LGFASWC+N+YING T HPS GGNGATPFFLTF++L  V+G+ASKLAG  H+R WR+DSLA AG++S++ WA+TAL
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVTAL

Query:  -------------------------IIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMG
                                 IIIL FTQL Y++L+HAG  S +YGPGYRD DY  G
Subjt:  -------------------------IIILMFTQLFYILLLHAGIFSPRYGPGYRDTDYGMG

AT1G29520.1 AWPM-19-like family protein4.4e-1132.03Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYI-NGTTYHPSMG------------GNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGA
        MA    + +A+ LL LN  +Y I+LG   W +NR I +G    P++             GN AT FF+ F +L  V+G AS ++GL H+R+W   SL  A
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYI-NGTTYHPSMG------------GNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGA

Query:  GSTSLLTWAVT------------------------ALIIILMFTQLFYILLLH
         + + + W +T                        A +IIL  TQL YI  +H
Subjt:  GSTSLLTWAVT------------------------ALIIILMFTQLFYILLLH

AT5G18970.1 AWPM-19-like family protein7.5e-1135.4Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSM-------------GGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGA
        MA    ++ A  LL LNL LYF++   ASW +N  I  T    S               GN AT FF+ FT++  V+G+A+ L G+ ++  W S +L  A
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSM-------------GGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGA

Query:  GSTSLLTWAVTAL
         ++SL++W++T L
Subjt:  GSTSLLTWAVTAL

AT5G46530.1 AWPM-19-like family protein1.4e-0930.52Show/hide
Query:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYIN-----GTTY---------HPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAG
        M +   + +A+ LL LN  +Y I+LG  +W +N+ IN     G  Y         H  M GN AT FF+ F ++  V G AS ++G+ H+++W + SL  
Subjt:  MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYIN-----GTTY---------HPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAG

Query:  AGSTSLLTWAVT------------------------ALIIILMFTQLFYILLLH
        A S + + W++T                        A +IIL  TQL YI  ++
Subjt:  AGSTSLLTWAVT------------------------ALIIILMFTQLFYILLLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGGCTTTGTATTTCATTCTCTTGGGTTTTGCTAGTTGGTGTATTAACAGATACATCAA
TGGCACTACCTACCATCCTAGCATGGGAGGGAATGGAGCAACGCCATTTTTCTTGACATTTACAATGCTGGTGGTGGTTCTAGGAATAGCATCGAAACTAGCCGGACTGT
ACCACATGAGAGCTTGGAGGAGCGACAGCCTGGCCGGTGCCGGTTCAACTTCACTGCTCACTTGGGCTGTAACTGCTCTCATCATCATATTGATGTTCACTCAGCTTTTC
TACATCCTCCTGCTCCATGCCGGAATCTTCAGCCCCCGCTACGGCCCTGGTTATCGGGACACCGACTACGGCATGGGCGGCCCTTCGACCGCTGCTGGTGAGCCTCCCAA
GGGACCTGCTGGGACAAGGGTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGGCTTTGTATTTCATTCTCTTGGGTTTTGCTAGTTGGTGTATTAACAGATACATCAA
TGGCACTACCTACCATCCTAGCATGGGAGGGAATGGAGCAACGCCATTTTTCTTGACATTTACAATGCTGGTGGTGGTTCTAGGAATAGCATCGAAACTAGCCGGACTGT
ACCACATGAGAGCTTGGAGGAGCGACAGCCTGGCCGGTGCCGGTTCAACTTCACTGCTCACTTGGGCTGTAACTGCTCTCATCATCATATTGATGTTCACTCAGCTTTTC
TACATCCTCCTGCTCCATGCCGGAATCTTCAGCCCCCGCTACGGCCCTGGTTATCGGGACACCGACTACGGCATGGGCGGCCCTTCGACCGCTGCTGGTGAGCCTCCCAA
GGGACCTGCTGGGACAAGGGTGGTTTAG
Protein sequenceShow/hide protein sequence
MAQTMGRNMAAPLLFLNLALYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFTMLVVVLGIASKLAGLYHMRAWRSDSLAGAGSTSLLTWAVTALIIILMFTQLF
YILLLHAGIFSPRYGPGYRDTDYGMGGPSTAAGEPPKGPAGTRVV