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Sed0000717 (gene) of Chayote v1 genome

Gene IDSed0000717
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like
Genome locationLG09:2917833..2923385
RNA-Seq ExpressionSed0000717
SyntenySed0000717
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR010625 - CHCH
IPR016680 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026281.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5193.4Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MA+AVD+AGDPIPTSAVLMSSSKHIA+MCRSENVAYLQCK+KDPNPEKCLEKG QVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

XP_004135555.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]3.0e-5092.45Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCL+KGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

XP_022930219.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]9.4e-5294.34Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA+MCRSENVAYLQCK+KDPNPEKCLEKG QVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

XP_022958837.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]4.7e-5192.45Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA+MCRSENVAYLQCK+KDPNPEKCL+KG QVTRCVLSLLKDLHQRCTK+MDAYVGCMYYNTNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

XP_038893587.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa hispida]1.0e-5092.45Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAV++AGDPIPTSAVLMSSSKHIA+ CRSENVAYLQCK+KDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

TrEMBL top hitse value%identityAlignment
A0A0A0LY30 CHCH domain-containing protein1.5e-5092.45Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCL+KGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

A0A6J1EWD6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like4.6e-5294.34Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA+MCRSENVAYLQCK+KDPNPEKCLEKG QVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

A0A6J1H2X4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like2.3e-5192.45Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA+MCRSENVAYLQCK+KDPNPEKCL+KG QVTRCVLSLLKDLHQRCTK+MDAYVGCMYYNTNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

A0A6J1KIR7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like4.6e-5294.34Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA+MCRSENVAYLQCK+KDPNPEKCLEKG QVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

A0A6J1KXR2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like2.3e-5192.45Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        MASAVD+AGDPIPTSAVLMSSSKHIA+MCRSENVAYLQCK+KDPNPEKCL+KG QVTRCVLSLLKDLHQRCTK+MDAYVGCMYYNTNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        K CPLE
Subjt:  KVCPLE

SwissProt top hitse value%identityAlignment
Q8LGE7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B5.7e-4476.42Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        M+SAVD+ G+PIPTSAVL +S+KHI   C  ENVA+L+CKK DPNPEKCL+KG  VTRCVL LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        KVCPL+
Subjt:  KVCPLE

Q9SQT4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A2.9e-4376.92Show/hide
Query:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKV
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CKK DPNPEKCLEKG  VTRCVL LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQ+AFEKV
Subjt:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKV

Query:  CPLE
        CPL+
Subjt:  CPLE

Arabidopsis top hitse value%identityAlignment
AT3G06310.1 Cox19-like CHCH family protein2.0e-4476.92Show/hide
Query:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKV
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CKK DPNPEKCLEKG  VTRCVL LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQ+AFEKV
Subjt:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKV

Query:  CPLE
        CPL+
Subjt:  CPLE

AT3G06310.2 Cox19-like CHCH family protein8.6e-1968.85Show/hide
Query:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSL
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CKK DPNPEKCLEKG  VTRCVL L
Subjt:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSL

AT3G06310.3 Cox19-like CHCH family protein2.0e-4476.92Show/hide
Query:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKV
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CKK DPNPEKCLEKG  VTRCVL LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQ+AFEKV
Subjt:  SAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKV

Query:  CPLE
        CPL+
Subjt:  CPLE

AT5G18800.1 Cox19-like CHCH family protein4.1e-4576.42Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        M+SAVD+ G+PIPTSAVL +S+KHI   C  ENVA+L+CKK DPNPEKCL+KG  VTRCVL LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        KVCPL+
Subjt:  KVCPLE

AT5G18800.2 Cox19-like CHCH family protein4.1e-4576.42Show/hide
Query:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE
        M+SAVD+ G+PIPTSAVL +S+KHI   C  ENVA+L+CKK DPNPEKCL+KG  VTRCVL LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQ+AFE
Subjt:  MASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFE

Query:  KVCPLE
        KVCPL+
Subjt:  KVCPLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCGGAAGCCGAAGATACAGAGTGCATCATCACTTTCAGCTCACGAACTCAACCCAGTGGATTTCAGGATTTGATTGAATCAGTAATGGCGAGCGCGGTAGATTC
TGCTGGAGATCCAATTCCGACGTCGGCGGTGCTAATGTCCTCGTCGAAGCACATTGCGAGCATGTGTCGATCGGAGAATGTGGCGTACCTTCAGTGCAAGAAGAAGGATC
CTAACCCGGAGAAATGTCTTGAGAAAGGCCATCAAGTCACCCGCTGCGTTCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCTTATGTCGGT
TGCATGTACTACAATACGAACGAGTTCGATTTATGTCGCAAAGAGCAGCAAGCATTTGAGAAAGTCTGCCCCTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCGGAAGCCGAAGATACAGAGTGCATCATCACTTTCAGCTCACGAACTCAACCCAGTGGATTTCAGGATTTGATTGAATCAGTAATGGCGAGCGCGGTAGATTC
TGCTGGAGATCCAATTCCGACGTCGGCGGTGCTAATGTCCTCGTCGAAGCACATTGCGAGCATGTGTCGATCGGAGAATGTGGCGTACCTTCAGTGCAAGAAGAAGGATC
CTAACCCGGAGAAATGTCTTGAGAAAGGCCATCAAGTCACCCGCTGCGTTCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCTTATGTCGGT
TGCATGTACTACAATACGAACGAGTTCGATTTATGTCGCAAAGAGCAGCAAGCATTTGAGAAAGTCTGCCCCTTGGAATGA
Protein sequenceShow/hide protein sequence
MKAEAEDTECIITFSSRTQPSGFQDLIESVMASAVDSAGDPIPTSAVLMSSSKHIASMCRSENVAYLQCKKKDPNPEKCLEKGHQVTRCVLSLLKDLHQRCTKEMDAYVG
CMYYNTNEFDLCRKEQQAFEKVCPLE